RNA–Protein interactions for RNA: ENST00000432504.1

TMEM50B-202, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-202ENST00000432504 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
TMEM50B-202ENST00000432504 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
TMEM50B-202ENST00000432504 SENP3Q9H4L4 574 aaPredicted RBP15.52■□□□□ 0.08
TMEM50B-202ENST00000432504 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.04
TMEM50B-202ENST00000432504 FOXD1Q16676 465 aa14.48□□□□□ -0.09
TMEM50B-202ENST00000432504 NISCHQ9Y2I1 1504 aa14.18□□□□□ -0.14
TMEM50B-202ENST00000432504 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
TMEM50B-202ENST00000432504 MSH5O43196 834 aa13.67□□□□□ -0.22
TMEM50B-202ENST00000432504 ABCC9O60706 1549 aa13.49□□□□□ -0.25
TMEM50B-202ENST00000432504 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
TMEM50B-202ENST00000432504 PLPPR3Q6T4P5 718 aa13.45□□□□□ -0.26
TMEM50B-202ENST00000432504 PPP6R1Q9UPN7 881 aa13.34□□□□□ -0.27
TMEM50B-202ENST00000432504 ADRA2BP18089 450 aa13.29□□□□□ -0.28
TMEM50B-202ENST00000432504 DNAJC5BQ9UF47 199 aa13.11□□□□□ -0.31
TMEM50B-202ENST00000432504 CCDC180Q9P1Z9 1646 aa12.94□□□□□ -0.34
TMEM50B-202ENST00000432504 RB1CC1Q8TDY2 1594 aa12.56□□□□□ -0.4
TMEM50B-202ENST00000432504 PABPN1Q86U42 306 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMEM50B-202ENST00000432504 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
TMEM50B-202ENST00000432504 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
TMEM50B-202ENST00000432504 NACADO15069 1562 aa12.34□□□□□ -0.43
TMEM50B-202ENST00000432504 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
TMEM50B-202ENST00000432504 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
TMEM50B-202ENST00000432504 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
TMEM50B-202ENST00000432504 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
TMEM50B-202ENST00000432504 SCAF1Q9H7N4 1312 aaKnown RBP12.19□□□□□ -0.46
TMEM50B-202ENST00000432504 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
TMEM50B-202ENST00000432504 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.46
TMEM50B-202ENST00000432504 EIF4G1Q04637 1599 aaKnown RBP11.99□□□□□ -0.49
TMEM50B-202ENST00000432504 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.5
TMEM50B-202ENST00000432504 SHROOM4Q9ULL8 1493 aa11.94□□□□□ -0.5
TMEM50B-202ENST00000432504 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
TMEM50B-202ENST00000432504 SCRIBQ14160 1630 aa11.82□□□□□ -0.52
TMEM50B-202ENST00000432504 DCAF8L1A6NGE4 600 aa11.78□□□□□ -0.52
TMEM50B-202ENST00000432504 CUX2O14529 1486 aa11.77□□□□□ -0.52
TMEM50B-202ENST00000432504 PPP4R3CPQ6ZMV5 832 aa11.76□□□□□ -0.53
TMEM50B-202ENST00000432504 HOXD11P31277 338 aaPredicted RBP11.71□□□□□ -0.53
TMEM50B-202ENST00000432504 ERCC6Q03468 1493 aa11.66□□□□□ -0.54
TMEM50B-202ENST00000432504 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
TMEM50B-202ENST00000432504 ZCCHC6Q5VYS8 1495 aaKnown RBP11.65□□□□□ -0.54
TMEM50B-202ENST00000432504 RNF39Q9H2S5 420 aa11.63□□□□□ -0.55
TMEM50B-202ENST00000432504 DCAF1Q9Y4B6 1507 aa11.63□□□□□ -0.55
TMEM50B-202ENST00000432504 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
TMEM50B-202ENST00000432504 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
TMEM50B-202ENST00000432504 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
TMEM50B-202ENST00000432504 NESP48681 1621 aa11.46□□□□□ -0.58
TMEM50B-202ENST00000432504 THOC2Q8NI27 1593 aaKnown RBP11.42□□□□□ -0.58
TMEM50B-202ENST00000432504 NCAPD3P42695 1498 aa11.38□□□□□ -0.59
TMEM50B-202ENST00000432504 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
TMEM50B-202ENST00000432504 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
TMEM50B-202ENST00000432504 KIF21AQ7Z4S6 1674 aa11.3□□□□□ -0.6
TMEM50B-202ENST00000432504 HMGXB3Q12766 1538 aa11.27□□□□□ -0.61
TMEM50B-202ENST00000432504 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
TMEM50B-202ENST00000432504 BAZ1AQ9NRL2 1556 aaPredicted RBP11.23□□□□□ -0.61
TMEM50B-202ENST00000432504 LAMC3Q9Y6N6 1575 aa11.23□□□□□ -0.61
TMEM50B-202ENST00000432504 SMARCA4P51532 1647 aa11.19□□□□□ -0.62
TMEM50B-202ENST00000432504 BAZ1BQ9UIG0 1483 aaKnown RBP11.18□□□□□ -0.62
TMEM50B-202ENST00000432504 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.62
TMEM50B-202ENST00000432504 PDS5BQ9NTI5 1447 aa11.17□□□□□ -0.62
TMEM50B-202ENST00000432504 OSCARQ8IYS5 282 aa11.14□□□□□ -0.63
TMEM50B-202ENST00000432504 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
TMEM50B-202ENST00000432504 WDR62O43379 1518 aa11.13□□□□□ -0.63
TMEM50B-202ENST00000432504 RIMBP3CA6NJZ7 1639 aa11.13□□□□□ -0.63
TMEM50B-202ENST00000432504 RIMBP3BA6NNM3 1639 aa11.13□□□□□ -0.63
TMEM50B-202ENST00000432504 RIMBP3Q9UFD9 1639 aa11.13□□□□□ -0.63
TMEM50B-202ENST00000432504 NPM3O75607 178 aaKnown RBP11.05□□□□□ -0.64
TMEM50B-202ENST00000432504 PEG3Q9GZU2 1588 aa11.05□□□□□ -0.64
TMEM50B-202ENST00000432504 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
TMEM50B-202ENST00000432504 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
TMEM50B-202ENST00000432504 TRHP20396 242 aaPredicted RBP11.01□□□□□ -0.65
TMEM50B-202ENST00000432504 CEP164Q9UPV0 1460 aa10.99□□□□□ -0.65
TMEM50B-202ENST00000432504 CYB5RLQ6IPT4 315 aa10.96□□□□□ -0.65
TMEM50B-202ENST00000432504 MROH2BQ7Z745 1585 aa10.95□□□□□ -0.66
TMEM50B-202ENST00000432504 FANCD2Q9BXW9 1451 aa10.93□□□□□ -0.66
TMEM50B-202ENST00000432504 URB2Q14146 1524 aaKnown RBP10.89□□□□□ -0.67
TMEM50B-202ENST00000432504 ARAP1Q96P48 1450 aa10.88□□□□□ -0.67
TMEM50B-202ENST00000432504 U3KPZ7 1027 aaPredicted RBP10.88□□□□□ -0.67
TMEM50B-202ENST00000432504 ZNF608Q9ULD9 1512 aaPredicted RBP10.86□□□□□ -0.67
TMEM50B-202ENST00000432504 CAPN15O75808 1086 aa10.82□□□□□ -0.68
TMEM50B-202ENST00000432504 WIZO95785 1651 aa10.82□□□□□ -0.68
TMEM50B-202ENST00000432504 DSG3P32926 999 aa10.8□□□□□ -0.68
TMEM50B-202ENST00000432504 SPINK5Q9NQ38 1064 aaPredicted RBP10.8□□□□□ -0.68
TMEM50B-202ENST00000432504 CHD1O14646 1710 aa10.8□□□□□ -0.68
TMEM50B-202ENST00000432504 CFTRP13569 1480 aa10.8□□□□□ -0.68
TMEM50B-202ENST00000432504 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
TMEM50B-202ENST00000432504 EIF4G3O43432 1585 aaKnown RBP10.77□□□□□ -0.69
TMEM50B-202ENST00000432504 POTEHQ6S545 545 aa10.75□□□□□ -0.69
TMEM50B-202ENST00000432504 RSF1Q96T23 1441 aaPredicted RBP10.73□□□□□ -0.69
TMEM50B-202ENST00000432504 FBLN2P98095 1184 aa10.71□□□□□ -0.69
TMEM50B-202ENST00000432504 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.71e-9■■■□□ 17.5
TMEM50B-202ENST00000432504 PRDM2Q13029 1718 aa10.68□□□□□ -0.7
TMEM50B-202ENST00000432504 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
TMEM50B-202ENST00000432504 TOPBP1Q92547 1522 aa10.67□□□□□ -0.7
TMEM50B-202ENST00000432504 CLASP1Q7Z460 1538 aa10.63□□□□□ -0.71
TMEM50B-202ENST00000432504 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
TMEM50B-202ENST00000432504 SLC4A2P04920 1241 aa10.61□□□□□ -0.71
TMEM50B-202ENST00000432504 TOP2AP11388 1531 aaKnown RBP10.6□□□□□ -0.71
TMEM50B-202ENST00000432504 KCNA4P22459 653 aa10.6□□□□□ -0.71
TMEM50B-202ENST00000432504 APLP2Q06481 763 aa10.59□□□□□ -0.71
TMEM50B-202ENST00000432504 DNMBPQ6XZF7 1577 aa10.58□□□□□ -0.72
TMEM50B-202ENST00000432504 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms