RNA–Protein interactions for RNA: ENST00000430443.1

CCT6P4-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 4, humanhuman

BASIC

Gene CCT6P4, Length 1,589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P4-201ENST00000430443 AEBP2Q6ZN18 517 aaPredicted RBP24.14■■□□□ 1.45
CCT6P4-201ENST00000430443 NISCHQ9Y2I1 1504 aa23.57■■□□□ 1.36
CCT6P4-201ENST00000430443 CHIC1Q5VXU3 224 aa22.78■■□□□ 1.24
CCT6P4-201ENST00000430443 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
CCT6P4-201ENST00000430443 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
CCT6P4-201ENST00000430443 PHF23Q9BUL5 403 aaPredicted RBP20.43■□□□□ 0.86
CCT6P4-201ENST00000430443 ABCC9O60706 1549 aa19.9■□□□□ 0.78
CCT6P4-201ENST00000430443 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
CCT6P4-201ENST00000430443 DCAF8L2P0C7V8 631 aa19.49■□□□□ 0.71
CCT6P4-201ENST00000430443 FOXD1Q16676 465 aa19.45■□□□□ 0.7
CCT6P4-201ENST00000430443 DCAF1Q9Y4B6 1507 aa19.44■□□□□ 0.7
CCT6P4-201ENST00000430443 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
CCT6P4-201ENST00000430443 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
CCT6P4-201ENST00000430443 NACADO15069 1562 aa19.31■□□□□ 0.68
CCT6P4-201ENST00000430443 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
CCT6P4-201ENST00000430443 SCRIBQ14160 1630 aa19.02■□□□□ 0.63
CCT6P4-201ENST00000430443 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
CCT6P4-201ENST00000430443 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
CCT6P4-201ENST00000430443 BICRAQ9NZM4 1560 aa18.8■□□□□ 0.6
CCT6P4-201ENST00000430443 MSH5O43196 834 aa18.69■□□□□ 0.58
CCT6P4-201ENST00000430443 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
CCT6P4-201ENST00000430443 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
CCT6P4-201ENST00000430443 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
CCT6P4-201ENST00000430443 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
CCT6P4-201ENST00000430443 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
CCT6P4-201ENST00000430443 RSF1Q96T23 1441 aaPredicted RBP18.17■□□□□ 0.5
CCT6P4-201ENST00000430443 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
CCT6P4-201ENST00000430443 WIZO95785 1651 aa18.09■□□□□ 0.49
CCT6P4-201ENST00000430443 SUPT5HO00267 1087 aaKnown RBP18.05■□□□□ 0.48
CCT6P4-201ENST00000430443 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
CCT6P4-201ENST00000430443 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
CCT6P4-201ENST00000430443 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
CCT6P4-201ENST00000430443 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
CCT6P4-201ENST00000430443 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
CCT6P4-201ENST00000430443 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
CCT6P4-201ENST00000430443 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
CCT6P4-201ENST00000430443 TOP2AP11388 1531 aaKnown RBP17.81■□□□□ 0.44
CCT6P4-201ENST00000430443 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
CCT6P4-201ENST00000430443 HMGXB3Q12766 1538 aa17.79■□□□□ 0.44
CCT6P4-201ENST00000430443 CCDC88BA6NC98 1476 aa17.65■□□□□ 0.42
CCT6P4-201ENST00000430443 PLPPR3Q6T4P5 718 aa17.53■□□□□ 0.4
CCT6P4-201ENST00000430443 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
CCT6P4-201ENST00000430443 NESP48681 1621 aa17.42■□□□□ 0.38
CCT6P4-201ENST00000430443 ADRA2BP18089 450 aa17.41■□□□□ 0.38
CCT6P4-201ENST00000430443 CFTRP13569 1480 aa17.37■□□□□ 0.37
CCT6P4-201ENST00000430443 CADPSQ9ULU8 1353 aa17.35■□□□□ 0.37
CCT6P4-201ENST00000430443 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
CCT6P4-201ENST00000430443 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
CCT6P4-201ENST00000430443 ABCC8Q09428 1581 aa17.22■□□□□ 0.35
CCT6P4-201ENST00000430443 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
CCT6P4-201ENST00000430443 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
CCT6P4-201ENST00000430443 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
CCT6P4-201ENST00000430443 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
CCT6P4-201ENST00000430443 CUX1P39880 1505 aa17.07■□□□□ 0.32
CCT6P4-201ENST00000430443 CEP164Q9UPV0 1460 aa17.07■□□□□ 0.32
CCT6P4-201ENST00000430443 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
CCT6P4-201ENST00000430443 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
CCT6P4-201ENST00000430443 BIVM-ERCC5R4GMW8 1640 aa17■□□□□ 0.31
CCT6P4-201ENST00000430443 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
CCT6P4-201ENST00000430443 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
CCT6P4-201ENST00000430443 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
CCT6P4-201ENST00000430443 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
CCT6P4-201ENST00000430443 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.31
CCT6P4-201ENST00000430443 MRC2Q9UBG0 1479 aa16.96■□□□□ 0.3
CCT6P4-201ENST00000430443 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
CCT6P4-201ENST00000430443 WDR62O43379 1518 aa16.91■□□□□ 0.3
CCT6P4-201ENST00000430443 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
CCT6P4-201ENST00000430443 POLA1P09884 1462 aaPredicted RBP16.87■□□□□ 0.29
CCT6P4-201ENST00000430443 CUX2O14529 1486 aa16.84■□□□□ 0.29
CCT6P4-201ENST00000430443 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
CCT6P4-201ENST00000430443 RUSC2Q8N2Y8 1516 aa16.83■□□□□ 0.28
CCT6P4-201ENST00000430443 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
CCT6P4-201ENST00000430443 SOGA1O94964 1423 aa16.8■□□□□ 0.28
CCT6P4-201ENST00000430443 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
CCT6P4-201ENST00000430443 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
CCT6P4-201ENST00000430443 ZNF608Q9ULD9 1512 aaPredicted RBP16.71■□□□□ 0.27
CCT6P4-201ENST00000430443 FAM9AQ8IZU1 332 aaPredicted RBP16.69■□□□□ 0.26
CCT6P4-201ENST00000430443 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
CCT6P4-201ENST00000430443 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
CCT6P4-201ENST00000430443 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
CCT6P4-201ENST00000430443 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCT6P4-201ENST00000430443 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
CCT6P4-201ENST00000430443 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
CCT6P4-201ENST00000430443 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
CCT6P4-201ENST00000430443 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
CCT6P4-201ENST00000430443 IGF1RP08069 1367 aa16.57■□□□□ 0.24
CCT6P4-201ENST00000430443 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
CCT6P4-201ENST00000430443 EEA1Q15075 1411 aa16.54■□□□□ 0.24
CCT6P4-201ENST00000430443 LOC105371045A0A1W2PR82 267 aa16.51■□□□□ 0.23
CCT6P4-201ENST00000430443 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
CCT6P4-201ENST00000430443 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
CCT6P4-201ENST00000430443 PRXQ9BXM0 1461 aa16.49■□□□□ 0.23
CCT6P4-201ENST00000430443 GRIN2BQ13224 1484 aa16.48■□□□□ 0.23
CCT6P4-201ENST00000430443 SNAPC4Q5SXM2 1469 aa16.46■□□□□ 0.23
CCT6P4-201ENST00000430443 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.23
CCT6P4-201ENST00000430443 KIF21BO75037 1637 aa16.44■□□□□ 0.22
CCT6P4-201ENST00000430443 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
CCT6P4-201ENST00000430443 DMRT2Q9Y5R5 561 aa16.44■□□□□ 0.22
CCT6P4-201ENST00000430443 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
CCT6P4-201ENST00000430443 CUL7Q14999 1698 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms