RNA–Protein interactions for RNA: ENST00000427623.5

FREM1-205, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 5

Gene FREM1, Length 1,421 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-205ENST00000427623 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
FREM1-205ENST00000427623 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
FREM1-205ENST00000427623 NISCHQ9Y2I1 1504 aa18.55■□□□□ 0.56
FREM1-205ENST00000427623 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
FREM1-205ENST00000427623 PHF23Q9BUL5 403 aaPredicted RBP17.66■□□□□ 0.42
FREM1-205ENST00000427623 FOXD1Q16676 465 aa16.79■□□□□ 0.28
FREM1-205ENST00000427623 POTEDQ86YR6 584 aa16.77■□□□□ 0.27
FREM1-205ENST00000427623 CCDC180Q9P1Z9 1646 aa16.55■□□□□ 0.24
FREM1-205ENST00000427623 MSH5O43196 834 aa16.14■□□□□ 0.17
FREM1-205ENST00000427623 ABCC9O60706 1549 aa15.84■□□□□ 0.13
FREM1-205ENST00000427623 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
FREM1-205ENST00000427623 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
FREM1-205ENST00000427623 PLPPR3Q6T4P5 718 aa15.51■□□□□ 0.07
FREM1-205ENST00000427623 NACADO15069 1562 aa15.41■□□□□ 0.06
FREM1-205ENST00000427623 RB1CC1Q8TDY2 1594 aa15.4■□□□□ 0.06
FREM1-205ENST00000427623 DCAF1Q9Y4B6 1507 aa15.37■□□□□ 0.05
FREM1-205ENST00000427623 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
FREM1-205ENST00000427623 DCAF8L2P0C7V8 631 aa15.32■□□□□ 0.04
FREM1-205ENST00000427623 UNC13AQ9UPW8 1703 aa15.22■□□□□ 0.03
FREM1-205ENST00000427623 PPP6R1Q9UPN7 881 aa15.12■□□□□ 0.01
FREM1-205ENST00000427623 ADRA2BP18089 450 aa15.06■□□□□ 0
FREM1-205ENST00000427623 SCRIBQ14160 1630 aa15.06■□□□□ 0
FREM1-205ENST00000427623 SHROOM4Q9ULL8 1493 aa15□□□□□ -0.01
FREM1-205ENST00000427623 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
FREM1-205ENST00000427623 SUPT5HO00267 1087 aaKnown RBP14.84□□□□□ -0.03
FREM1-205ENST00000427623 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.057e-8■□□□□ 11.1
FREM1-205ENST00000427623 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
FREM1-205ENST00000427623 HRCP23327 699 aa14.46□□□□□ -0.09
FREM1-205ENST00000427623 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
FREM1-205ENST00000427623 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
FREM1-205ENST00000427623 CC2D2AQ9P2K1 1620 aa14.4□□□□□ -0.1
FREM1-205ENST00000427623 CECR2Q9BXF3 1484 aa14.39□□□□□ -0.11
FREM1-205ENST00000427623 MROH2BQ7Z745 1585 aa14.31□□□□□ -0.12
FREM1-205ENST00000427623 SMARCA2P51531 1590 aa14.25□□□□□ -0.13
FREM1-205ENST00000427623 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
FREM1-205ENST00000427623 WIZO95785 1651 aa14.24□□□□□ -0.13
FREM1-205ENST00000427623 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
FREM1-205ENST00000427623 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
FREM1-205ENST00000427623 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
FREM1-205ENST00000427623 ATAD2BQ9ULI0 1458 aa14.19□□□□□ -0.14
FREM1-205ENST00000427623 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
FREM1-205ENST00000427623 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
FREM1-205ENST00000427623 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
FREM1-205ENST00000427623 NCAPD3P42695 1498 aa14.13□□□□□ -0.15
FREM1-205ENST00000427623 BAZ1BQ9UIG0 1483 aaKnown RBP14.12□□□□□ -0.15
FREM1-205ENST00000427623 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
FREM1-205ENST00000427623 TOP2AP11388 1531 aaKnown RBP14.06□□□□□ -0.16
FREM1-205ENST00000427623 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
FREM1-205ENST00000427623 ZEB1P37275 1124 aaPredicted RBP14.04□□□□□ -0.16
FREM1-205ENST00000427623 LOC105371045A0A1W2PR82 267 aa14.03□□□□□ -0.16
FREM1-205ENST00000427623 MAPK8IP2Q13387 824 aaPredicted RBP14□□□□□ -0.17
FREM1-205ENST00000427623 TRIM41Q8WV44 630 aa13.96□□□□□ -0.18
FREM1-205ENST00000427623 PRDM2Q13029 1718 aa13.91□□□□□ -0.18
FREM1-205ENST00000427623 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
FREM1-205ENST00000427623 CCDC88BA6NC98 1476 aa13.83□□□□□ -0.2
FREM1-205ENST00000427623 LAMC3Q9Y6N6 1575 aa13.83□□□□□ -0.2
FREM1-205ENST00000427623 NESP48681 1621 aa13.77□□□□□ -0.21
FREM1-205ENST00000427623 KIF21AQ7Z4S6 1674 aa13.76□□□□□ -0.21
FREM1-205ENST00000427623 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
FREM1-205ENST00000427623 CFTRP13569 1480 aa13.71□□□□□ -0.21
FREM1-205ENST00000427623 FAM9AQ8IZU1 332 aaPredicted RBP13.66□□□□□ -0.22
FREM1-205ENST00000427623 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
FREM1-205ENST00000427623 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
FREM1-205ENST00000427623 PPP4R3CPQ6ZMV5 832 aa13.64□□□□□ -0.23
FREM1-205ENST00000427623 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
FREM1-205ENST00000427623 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
FREM1-205ENST00000427623 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
FREM1-205ENST00000427623 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
FREM1-205ENST00000427623 CEP164Q9UPV0 1460 aa13.6□□□□□ -0.23
FREM1-205ENST00000427623 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
FREM1-205ENST00000427623 EEA1Q15075 1411 aa13.54□□□□□ -0.24
FREM1-205ENST00000427623 MRC2Q9UBG0 1479 aa13.53□□□□□ -0.24
FREM1-205ENST00000427623 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
FREM1-205ENST00000427623 WDR62O43379 1518 aa13.5□□□□□ -0.25
FREM1-205ENST00000427623 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
FREM1-205ENST00000427623 C1QBPQ07021 282 aaKnown RBP13.47□□□□□ -0.25
FREM1-205ENST00000427623 URB2Q14146 1524 aaKnown RBP13.47□□□□□ -0.25
FREM1-205ENST00000427623 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.26
FREM1-205ENST00000427623 ABCC8Q09428 1581 aa13.46□□□□□ -0.26
FREM1-205ENST00000427623 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
FREM1-205ENST00000427623 TOPBP1Q92547 1522 aa13.44□□□□□ -0.26
FREM1-205ENST00000427623 CCER1Q8TC90 406 aaPredicted RBP13.43□□□□□ -0.26
FREM1-205ENST00000427623 CUX1P39880 1505 aa13.42□□□□□ -0.26
FREM1-205ENST00000427623 CUX2O14529 1486 aa13.42□□□□□ -0.26
FREM1-205ENST00000427623 SYNJ1O43426 1573 aa13.41□□□□□ -0.26
FREM1-205ENST00000427623 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
FREM1-205ENST00000427623 EHMT2Q96KQ7 1210 aa13.4□□□□□ -0.26
FREM1-205ENST00000427623 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
FREM1-205ENST00000427623 CEP162Q5TB80 1403 aa13.38□□□□□ -0.27
FREM1-205ENST00000427623 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
FREM1-205ENST00000427623 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
FREM1-205ENST00000427623 GOLGA3Q08378 1498 aa13.33□□□□□ -0.27
FREM1-205ENST00000427623 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.27
FREM1-205ENST00000427623 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
FREM1-205ENST00000427623 TARBP1Q13395 1621 aaKnown RBP13.32□□□□□ -0.28
FREM1-205ENST00000427623 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
FREM1-205ENST00000427623 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
FREM1-205ENST00000427623 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
FREM1-205ENST00000427623 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
FREM1-205ENST00000427623 SOGA1O94964 1423 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms