RNA–Protein interactions for RNA: ENST00000423620.6

ESRP1-202, Transcript of epithelial splicing regulatory protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRP1, Length 3,746 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRP1-202ENST00000423620 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
ESRP1-202ENST00000423620 CCDC180Q9P1Z9 1646 aa15.19■□□□□ 0.02
ESRP1-202ENST00000423620 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
ESRP1-202ENST00000423620 DCAF1Q9Y4B6 1507 aa14.4□□□□□ -0.1
ESRP1-202ENST00000423620 ABCC9O60706 1549 aa14.22□□□□□ -0.13
ESRP1-202ENST00000423620 MYO15BQ96JP2 1530 aa14.2□□□□□ -0.14
ESRP1-202ENST00000423620 SHROOM4Q9ULL8 1493 aa14.13□□□□□ -0.15
ESRP1-202ENST00000423620 NACADO15069 1562 aa14.05□□□□□ -0.16
ESRP1-202ENST00000423620 DCAF8L2P0C7V8 631 aa14.04□□□□□ -0.16
ESRP1-202ENST00000423620 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
ESRP1-202ENST00000423620 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
ESRP1-202ENST00000423620 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.18
ESRP1-202ENST00000423620 HRCP23327 699 aa13.79□□□□□ -0.2
ESRP1-202ENST00000423620 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
ESRP1-202ENST00000423620 PELP1Q8IZL8 1130 aaKnown RBP13.78□□□□□ -0.2
ESRP1-202ENST00000423620 BICRAQ9NZM4 1560 aa13.69□□□□□ -0.22
ESRP1-202ENST00000423620 PCGF6Q9BYE7 350 aa13.6□□□□□ -0.23
ESRP1-202ENST00000423620 CECR2Q9BXF3 1484 aa13.58□□□□□ -0.24
ESRP1-202ENST00000423620 RSF1Q96T23 1441 aaPredicted RBP13.52□□□□□ -0.24
ESRP1-202ENST00000423620 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
ESRP1-202ENST00000423620 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
ESRP1-202ENST00000423620 WIZO95785 1651 aa13.43□□□□□ -0.26
ESRP1-202ENST00000423620 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
ESRP1-202ENST00000423620 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
ESRP1-202ENST00000423620 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
ESRP1-202ENST00000423620 SCAF1Q9H7N4 1312 aaKnown RBP13.37□□□□□ -0.27
ESRP1-202ENST00000423620 MYT1Q01538 1121 aa13.29□□□□□ -0.28
ESRP1-202ENST00000423620 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
ESRP1-202ENST00000423620 EIF4G1Q04637 1599 aaKnown RBP13.21□□□□□ -0.29
ESRP1-202ENST00000423620 TOP2AP11388 1531 aaKnown RBP13.21□□□□□ -0.29
ESRP1-202ENST00000423620 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
ESRP1-202ENST00000423620 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
ESRP1-202ENST00000423620 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
ESRP1-202ENST00000423620 CHIC1Q5VXU3 224 aa13.06□□□□□ -0.32
ESRP1-202ENST00000423620 HMGXB3Q12766 1538 aa13□□□□□ -0.33
ESRP1-202ENST00000423620 NCAPD3P42695 1498 aa12.98□□□□□ -0.33
ESRP1-202ENST00000423620 BAZ1BQ9UIG0 1483 aaKnown RBP12.97□□□□□ -0.33
ESRP1-202ENST00000423620 CC2D2AQ9P2K1 1620 aa12.96□□□□□ -0.33
ESRP1-202ENST00000423620 GTF3C3Q9Y5Q9 886 aa12.93□□□□□ -0.34
ESRP1-202ENST00000423620 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
ESRP1-202ENST00000423620 ABCC8Q09428 1581 aa12.87□□□□□ -0.35
ESRP1-202ENST00000423620 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
ESRP1-202ENST00000423620 LOC105371045A0A1W2PR82 267 aa12.83□□□□□ -0.36
ESRP1-202ENST00000423620 TRIM26Q12899 539 aaPredicted RBP12.78□□□□□ -0.36
ESRP1-202ENST00000423620 PRDM2Q13029 1718 aa12.78□□□□□ -0.36
ESRP1-202ENST00000423620 SYNJ1O43426 1573 aa12.75□□□□□ -0.37
ESRP1-202ENST00000423620 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
ESRP1-202ENST00000423620 CFTRP13569 1480 aa12.73□□□□□ -0.37
ESRP1-202ENST00000423620 CENPBP07199 599 aaPredicted RBP12.72□□□□□ -0.37
ESRP1-202ENST00000423620 DNAJC5BQ9UF47 199 aa12.7□□□□□ -0.38
ESRP1-202ENST00000423620 BCL11AQ9H165 835 aa12.68□□□□□ -0.38
ESRP1-202ENST00000423620 YTHDC1Q96MU7 727 aaKnown RBP12.67□□□□□ -0.38
ESRP1-202ENST00000423620 BIVM-ERCC5R4GMW8 1640 aa12.67□□□□□ -0.38
ESRP1-202ENST00000423620 TRIM41Q8WV44 630 aa12.65□□□□□ -0.38
ESRP1-202ENST00000423620 TOP2BQ02880 1626 aa12.64□□□□□ -0.39
ESRP1-202ENST00000423620 WRNQ14191 1432 aaPredicted RBP eCLIP12.63□□□□□ -0.39
ESRP1-202ENST00000423620 CUX1P39880 1505 aa12.62□□□□□ -0.39
ESRP1-202ENST00000423620 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
ESRP1-202ENST00000423620 NESP48681 1621 aa12.6□□□□□ -0.39
ESRP1-202ENST00000423620 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
ESRP1-202ENST00000423620 SOGA1O94964 1423 aa12.59□□□□□ -0.39
ESRP1-202ENST00000423620 EHMT2Q96KQ7 1210 aa12.59□□□□□ -0.39
ESRP1-202ENST00000423620 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
ESRP1-202ENST00000423620 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
ESRP1-202ENST00000423620 LAMC3Q9Y6N6 1575 aa12.53□□□□□ -0.4
ESRP1-202ENST00000423620 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
ESRP1-202ENST00000423620 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
ESRP1-202ENST00000423620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
ESRP1-202ENST00000423620 TTBK1Q5TCY1 1321 aaPredicted RBP12.46□□□□□ -0.41
ESRP1-202ENST00000423620 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
ESRP1-202ENST00000423620 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
ESRP1-202ENST00000423620 PRKCSHP14314 528 aaPredicted RBP12.43□□□□□ -0.42
ESRP1-202ENST00000423620 DNMBPQ6XZF7 1577 aa12.42□□□□□ -0.42
ESRP1-202ENST00000423620 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
ESRP1-202ENST00000423620 KIF21BO75037 1637 aa12.41□□□□□ -0.42
ESRP1-202ENST00000423620 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
ESRP1-202ENST00000423620 EEA1Q15075 1411 aa12.4□□□□□ -0.42
ESRP1-202ENST00000423620 FGD5Q6ZNL6 1462 aa12.4□□□□□ -0.42
ESRP1-202ENST00000423620 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
ESRP1-202ENST00000423620 POLA1P09884 1462 aaPredicted RBP12.35□□□□□ -0.43
ESRP1-202ENST00000423620 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
ESRP1-202ENST00000423620 ANP32EQ9BTT0 268 aa12.34□□□□□ -0.43
ESRP1-202ENST00000423620 PRXQ9BXM0 1461 aa12.33□□□□□ -0.44
ESRP1-202ENST00000423620 RAPGEF2Q9Y4G8 1499 aa12.32□□□□□ -0.44
ESRP1-202ENST00000423620 TARBP1Q13395 1621 aaKnown RBP12.32□□□□□ -0.44
ESRP1-202ENST00000423620 RAD54L2Q9Y4B4 1467 aa12.32□□□□□ -0.44
ESRP1-202ENST00000423620 ABCA10Q8WWZ4 1543 aa12.3□□□□□ -0.44
ESRP1-202ENST00000423620 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
ESRP1-202ENST00000423620 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
ESRP1-202ENST00000423620 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
ESRP1-202ENST00000423620 GOLGA3Q08378 1498 aa12.28□□□□□ -0.44
ESRP1-202ENST00000423620 ERICH3Q5RHP9 1530 aa12.28□□□□□ -0.44
ESRP1-202ENST00000423620 WDR62O43379 1518 aa12.27□□□□□ -0.45
ESRP1-202ENST00000423620 TNIKQ9UKE5 1360 aa12.26□□□□□ -0.45
ESRP1-202ENST00000423620 CUX2O14529 1486 aa12.26□□□□□ -0.45
ESRP1-202ENST00000423620 KIF27Q86VH2 1401 aa12.24□□□□□ -0.45
ESRP1-202ENST00000423620 IGF1RP08069 1367 aa12.24□□□□□ -0.45
ESRP1-202ENST00000423620 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
ESRP1-202ENST00000423620 CEP162Q5TB80 1403 aa12.23□□□□□ -0.45
ESRP1-202ENST00000423620 PBRM1Q86U86 1689 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms