RNA–Protein interactions for RNA: ENST00000422187.2

XRCC6P3-201, Transcript of X-ray repair cross complementing 6 pseudogene 3, humanhuman

BASIC

Gene XRCC6P3, Length 1,621 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P3-201ENST00000422187 AEBP2Q6ZN18 517 aaPredicted RBP20.02■□□□□ 0.79
XRCC6P3-201ENST00000422187 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
XRCC6P3-201ENST00000422187 NISCHQ9Y2I1 1504 aa18.96■□□□□ 0.63
XRCC6P3-201ENST00000422187 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
XRCC6P3-201ENST00000422187 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
XRCC6P3-201ENST00000422187 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
XRCC6P3-201ENST00000422187 PLPPR3Q6T4P5 718 aa16.36■□□□□ 0.21
XRCC6P3-201ENST00000422187 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
XRCC6P3-201ENST00000422187 ABCC9O60706 1549 aa15.89■□□□□ 0.14
XRCC6P3-201ENST00000422187 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
XRCC6P3-201ENST00000422187 FOXD1Q16676 465 aa15.69■□□□□ 0.1
XRCC6P3-201ENST00000422187 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
XRCC6P3-201ENST00000422187 NACADO15069 1562 aa15.59■□□□□ 0.09
XRCC6P3-201ENST00000422187 RB1CC1Q8TDY2 1594 aa15.51■□□□□ 0.07
XRCC6P3-201ENST00000422187 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
XRCC6P3-201ENST00000422187 ADRA2BP18089 450 aa15.4■□□□□ 0.06
XRCC6P3-201ENST00000422187 PPP6R1Q9UPN7 881 aa15.35■□□□□ 0.05
XRCC6P3-201ENST00000422187 SCRIBQ14160 1630 aa15.29■□□□□ 0.04
XRCC6P3-201ENST00000422187 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
XRCC6P3-201ENST00000422187 SHROOM4Q9ULL8 1493 aa15.17■□□□□ 0.02
XRCC6P3-201ENST00000422187 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
XRCC6P3-201ENST00000422187 PIAS4Q8N2W9 510 aaPredicted RBP14.95□□□□□ -0.02
XRCC6P3-201ENST00000422187 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
XRCC6P3-201ENST00000422187 CECR2Q9BXF3 1484 aa14.72□□□□□ -0.05
XRCC6P3-201ENST00000422187 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
XRCC6P3-201ENST00000422187 SMARCA4P51532 1647 aa14.67□□□□□ -0.06
XRCC6P3-201ENST00000422187 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
XRCC6P3-201ENST00000422187 EIF4G1Q04637 1599 aaKnown RBP14.61□□□□□ -0.07
XRCC6P3-201ENST00000422187 RSF1Q96T23 1441 aaPredicted RBP14.58□□□□□ -0.08
XRCC6P3-201ENST00000422187 PEG3Q9GZU2 1588 aa14.53□□□□□ -0.08
XRCC6P3-201ENST00000422187 WIZO95785 1651 aa14.53□□□□□ -0.08
XRCC6P3-201ENST00000422187 KCNA4P22459 653 aa14.5□□□□□ -0.09
XRCC6P3-201ENST00000422187 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
XRCC6P3-201ENST00000422187 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
XRCC6P3-201ENST00000422187 CC2D2AQ9P2K1 1620 aa14.44□□□□□ -0.1
XRCC6P3-201ENST00000422187 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
XRCC6P3-201ENST00000422187 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
XRCC6P3-201ENST00000422187 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
XRCC6P3-201ENST00000422187 HMGXB3Q12766 1538 aa14.38□□□□□ -0.11
XRCC6P3-201ENST00000422187 MSH5O43196 834 aa14.37□□□□□ -0.11
XRCC6P3-201ENST00000422187 NCAPD3P42695 1498 aa14.35□□□□□ -0.11
XRCC6P3-201ENST00000422187 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
XRCC6P3-201ENST00000422187 NCBP3Q53F19 620 aaKnown RBP14.22□□□□□ -0.13
XRCC6P3-201ENST00000422187 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
XRCC6P3-201ENST00000422187 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
XRCC6P3-201ENST00000422187 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
XRCC6P3-201ENST00000422187 PRDM2Q13029 1718 aa14.03□□□□□ -0.16
XRCC6P3-201ENST00000422187 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
XRCC6P3-201ENST00000422187 CFTRP13569 1480 aa13.96□□□□□ -0.17
XRCC6P3-201ENST00000422187 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
XRCC6P3-201ENST00000422187 NPM3O75607 178 aaKnown RBP13.95□□□□□ -0.18
XRCC6P3-201ENST00000422187 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
XRCC6P3-201ENST00000422187 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
XRCC6P3-201ENST00000422187 SLC4A1APQ9BWU0 796 aaKnown RBP13.91□□□□□ -0.18
XRCC6P3-201ENST00000422187 NESP48681 1621 aa13.89□□□□□ -0.19
XRCC6P3-201ENST00000422187 MAPK8IP2Q13387 824 aaPredicted RBP13.86□□□□□ -0.19
XRCC6P3-201ENST00000422187 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
XRCC6P3-201ENST00000422187 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
XRCC6P3-201ENST00000422187 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
XRCC6P3-201ENST00000422187 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.21
XRCC6P3-201ENST00000422187 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
XRCC6P3-201ENST00000422187 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
XRCC6P3-201ENST00000422187 BIVM-ERCC5R4GMW8 1640 aa13.75□□□□□ -0.21
XRCC6P3-201ENST00000422187 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
XRCC6P3-201ENST00000422187 TOP2BQ02880 1626 aa13.72□□□□□ -0.21
XRCC6P3-201ENST00000422187 CUX1P39880 1505 aa13.71□□□□□ -0.21
XRCC6P3-201ENST00000422187 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
XRCC6P3-201ENST00000422187 THOC2Q8NI27 1593 aaKnown RBP13.68□□□□□ -0.22
XRCC6P3-201ENST00000422187 URB2Q14146 1524 aaKnown RBP13.66□□□□□ -0.22
XRCC6P3-201ENST00000422187 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
XRCC6P3-201ENST00000422187 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
XRCC6P3-201ENST00000422187 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
XRCC6P3-201ENST00000422187 WDR62O43379 1518 aa13.63□□□□□ -0.23
XRCC6P3-201ENST00000422187 TRIM41Q8WV44 630 aa13.6□□□□□ -0.23
XRCC6P3-201ENST00000422187 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
XRCC6P3-201ENST00000422187 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
XRCC6P3-201ENST00000422187 FGD5Q6ZNL6 1462 aa13.58□□□□□ -0.23
XRCC6P3-201ENST00000422187 WDR97A6NE52 1622 aa13.56□□□□□ -0.24
XRCC6P3-201ENST00000422187 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
XRCC6P3-201ENST00000422187 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
XRCC6P3-201ENST00000422187 TARBP1Q13395 1621 aaKnown RBP13.5□□□□□ -0.25
XRCC6P3-201ENST00000422187 CUX2O14529 1486 aa13.48□□□□□ -0.25
XRCC6P3-201ENST00000422187 ABCA10Q8WWZ4 1543 aa13.47□□□□□ -0.25
XRCC6P3-201ENST00000422187 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
XRCC6P3-201ENST00000422187 SOGA1O94964 1423 aa13.46□□□□□ -0.26
XRCC6P3-201ENST00000422187 ABCA5Q8WWZ7 1642 aa13.45□□□□□ -0.26
XRCC6P3-201ENST00000422187 IFT140Q96RY7 1462 aa13.44□□□□□ -0.26
XRCC6P3-201ENST00000422187 EEA1Q15075 1411 aa13.43□□□□□ -0.26
XRCC6P3-201ENST00000422187 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
XRCC6P3-201ENST00000422187 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
XRCC6P3-201ENST00000422187 KIF27Q86VH2 1401 aa13.39□□□□□ -0.27
XRCC6P3-201ENST00000422187 PBRM1Q86U86 1689 aa13.38□□□□□ -0.27
XRCC6P3-201ENST00000422187 EIF4G3O43432 1585 aaKnown RBP13.38□□□□□ -0.27
XRCC6P3-201ENST00000422187 ZNF608Q9ULD9 1512 aaPredicted RBP13.35□□□□□ -0.27
XRCC6P3-201ENST00000422187 KIF21BO75037 1637 aa13.33□□□□□ -0.27
XRCC6P3-201ENST00000422187 GAPVD1Q14C86 1478 aa13.33□□□□□ -0.28
XRCC6P3-201ENST00000422187 CUL7Q14999 1698 aa13.32□□□□□ -0.28
XRCC6P3-201ENST00000422187 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
XRCC6P3-201ENST00000422187 ZBTB22O15209 634 aa13.31□□□□□ -0.28
XRCC6P3-201ENST00000422187 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms