RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 NISCHQ9Y2I1 1504 aa35.65■■■■□ 3.3
SEMA4F-204ENST00000420077 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
SEMA4F-204ENST00000420077 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
SEMA4F-204ENST00000420077 SHROOM4Q9ULL8 1493 aa29.95■■■□□ 2.38
SEMA4F-204ENST00000420077 DCAF8L2P0C7V8 631 aa29.46■■■□□ 2.31
SEMA4F-204ENST00000420077 DCAF1Q9Y4B6 1507 aa29.39■■■□□ 2.3
SEMA4F-204ENST00000420077 SUPT5HO00267 1087 aaKnown RBP29.25■■■□□ 2.27
SEMA4F-204ENST00000420077 ABCC9O60706 1549 aa29.08■■■□□ 2.25
SEMA4F-204ENST00000420077 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
SEMA4F-204ENST00000420077 CHIC1Q5VXU3 224 aa28.47■■■□□ 2.15
SEMA4F-204ENST00000420077 SCRIBQ14160 1630 aa28.41■■■□□ 2.14
SEMA4F-204ENST00000420077 NACADO15069 1562 aa28.3■■■□□ 2.12
SEMA4F-204ENST00000420077 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
SEMA4F-204ENST00000420077 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
SEMA4F-204ENST00000420077 CECR2Q9BXF3 1484 aa27.71■■■□□ 2.03
SEMA4F-204ENST00000420077 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
SEMA4F-204ENST00000420077 MROH2BQ7Z745 1585 aa27.65■■■□□ 2.02
SEMA4F-204ENST00000420077 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2
SEMA4F-204ENST00000420077 WIZO95785 1651 aa27.51■■■□□ 2
SEMA4F-204ENST00000420077 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
SEMA4F-204ENST00000420077 BAZ1AQ9NRL2 1556 aaPredicted RBP27.43■■□□□ 1.98
SEMA4F-204ENST00000420077 TRIM41Q8WV44 630 aa27.35■■□□□ 1.97
SEMA4F-204ENST00000420077 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
SEMA4F-204ENST00000420077 PCGF6Q9BYE7 350 aa27.26■■□□□ 1.96
SEMA4F-204ENST00000420077 HRCP23327 699 aa27.24■■□□□ 1.95
SEMA4F-204ENST00000420077 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
SEMA4F-204ENST00000420077 EIF4G1Q04637 1599 aaKnown RBP27.18■■□□□ 1.94
SEMA4F-204ENST00000420077 TOP2AP11388 1531 aaKnown RBP27.15■■□□□ 1.94
SEMA4F-204ENST00000420077 FAM9AQ8IZU1 332 aaPredicted RBP26.99■■□□□ 1.91
SEMA4F-204ENST00000420077 SMARCA2P51531 1590 aa26.97■■□□□ 1.91
SEMA4F-204ENST00000420077 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
SEMA4F-204ENST00000420077 TRIM26Q12899 539 aaPredicted RBP26.92■■□□□ 1.9
SEMA4F-204ENST00000420077 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
SEMA4F-204ENST00000420077 ABCC8Q09428 1581 aa26.76■■□□□ 1.88
SEMA4F-204ENST00000420077 EHMT2Q96KQ7 1210 aa26.65■■□□□ 1.86
SEMA4F-204ENST00000420077 PPARGC1BQ86YN6 1023 aaKnown RBP26.56■■□□□ 1.84
SEMA4F-204ENST00000420077 ATAD2BQ9ULI0 1458 aa26.53■■□□□ 1.84
SEMA4F-204ENST00000420077 SOGA1O94964 1423 aa26.43■■□□□ 1.82
SEMA4F-204ENST00000420077 EEA1Q15075 1411 aa26.43■■□□□ 1.82
SEMA4F-204ENST00000420077 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
SEMA4F-204ENST00000420077 WRNQ14191 1432 aaPredicted RBP eCLIP26.37■■□□□ 1.81
SEMA4F-204ENST00000420077 RUSC2Q8N2Y8 1516 aa26.3■■□□□ 1.8
SEMA4F-204ENST00000420077 SYNJ1O43426 1573 aa26.29■■□□□ 1.8
SEMA4F-204ENST00000420077 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
SEMA4F-204ENST00000420077 TNIKQ9UKE5 1360 aa26.27■■□□□ 1.8
SEMA4F-204ENST00000420077 CEP162Q5TB80 1403 aa26.27■■□□□ 1.8
SEMA4F-204ENST00000420077 CSRNP3Q8WYN3 585 aa26.25■■□□□ 1.79
SEMA4F-204ENST00000420077 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
SEMA4F-204ENST00000420077 NCAPD3P42695 1498 aa26.17■■□□□ 1.78
SEMA4F-204ENST00000420077 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
SEMA4F-204ENST00000420077 HMGXB3Q12766 1538 aa26.13■■□□□ 1.77
SEMA4F-204ENST00000420077 KIF21BO75037 1637 aa26.12■■□□□ 1.77
SEMA4F-204ENST00000420077 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
SEMA4F-204ENST00000420077 TOP2BQ02880 1626 aa26.05■■□□□ 1.76
SEMA4F-204ENST00000420077 UBTFP17480 764 aaKnown RBP26.05■■□□□ 1.76
SEMA4F-204ENST00000420077 BIVM-ERCC5R4GMW8 1640 aa26.01■■□□□ 1.75
SEMA4F-204ENST00000420077 RAPGEF2Q9Y4G8 1499 aa25.84■■□□□ 1.73
SEMA4F-204ENST00000420077 DNAJC5BQ9UF47 199 aa25.83■■□□□ 1.73
SEMA4F-204ENST00000420077 CLIP1P30622 1438 aa25.82■■□□□ 1.72
SEMA4F-204ENST00000420077 CFTRP13569 1480 aa25.8■■□□□ 1.72
SEMA4F-204ENST00000420077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.78■■□□□ 1.72
SEMA4F-204ENST00000420077 PRDM2Q13029 1718 aa25.78■■□□□ 1.72
SEMA4F-204ENST00000420077 CUX1P39880 1505 aa25.78■■□□□ 1.72
SEMA4F-204ENST00000420077 TTBK1Q5TCY1 1321 aaPredicted RBP25.78■■□□□ 1.72
SEMA4F-204ENST00000420077 ERICH3Q5RHP9 1530 aa25.74■■□□□ 1.71
SEMA4F-204ENST00000420077 CCER1Q8TC90 406 aaPredicted RBP25.73■■□□□ 1.71
SEMA4F-204ENST00000420077 VPS8Q8N3P4 1428 aa25.73■■□□□ 1.71
SEMA4F-204ENST00000420077 PRXQ9BXM0 1461 aa25.69■■□□□ 1.7
SEMA4F-204ENST00000420077 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
SEMA4F-204ENST00000420077 KIF27Q86VH2 1401 aa25.59■■□□□ 1.69
SEMA4F-204ENST00000420077 NESP48681 1621 aa25.56■■□□□ 1.68
SEMA4F-204ENST00000420077 ARAP1Q96P48 1450 aa25.47■■□□□ 1.67
SEMA4F-204ENST00000420077 APLP2Q06481 763 aa25.46■■□□□ 1.67
SEMA4F-204ENST00000420077 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
SEMA4F-204ENST00000420077 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
SEMA4F-204ENST00000420077 CUX2O14529 1486 aa25.35■■□□□ 1.65
SEMA4F-204ENST00000420077 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
SEMA4F-204ENST00000420077 HNRNPUL2Q1KMD3 747 aaKnown RBP25.31■■□□□ 1.64
SEMA4F-204ENST00000420077 IGF1RP08069 1367 aa25.28■■□□□ 1.64
SEMA4F-204ENST00000420077 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
SEMA4F-204ENST00000420077 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
SEMA4F-204ENST00000420077 DNMBPQ6XZF7 1577 aa25.19■■□□□ 1.62
SEMA4F-204ENST00000420077 CARMIL1Q5VZK9 1371 aa25.17■■□□□ 1.62
SEMA4F-204ENST00000420077 KANK4Q5T7N3 995 aaPredicted RBP25.16■■□□□ 1.62
SEMA4F-204ENST00000420077 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
SEMA4F-204ENST00000420077 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
SEMA4F-204ENST00000420077 DIEXFQ68CQ4 756 aaKnown RBP25.12■■□□□ 1.61
SEMA4F-204ENST00000420077 RRBP1Q9P2E9 1410 aaKnown RBP25.11■■□□□ 1.61
SEMA4F-204ENST00000420077 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
SEMA4F-204ENST00000420077 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
SEMA4F-204ENST00000420077 POLA1P09884 1462 aaPredicted RBP25.07■■□□□ 1.6
SEMA4F-204ENST00000420077 URB2Q14146 1524 aaKnown RBP25.05■■□□□ 1.6
SEMA4F-204ENST00000420077 MAP3K1Q13233 1512 aa25.04■■□□□ 1.6
SEMA4F-204ENST00000420077 ZNF316A6NFI3 1004 aaPredicted RBP25.04■■□□□ 1.6
SEMA4F-204ENST00000420077 RAD54L2Q9Y4B4 1467 aa25.03■■□□□ 1.6
SEMA4F-204ENST00000420077 TIAM1Q13009 1591 aa25.02■■□□□ 1.6
SEMA4F-204ENST00000420077 CUL7Q14999 1698 aa25■■□□□ 1.59
SEMA4F-204ENST00000420077 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SEMA4F-204ENST00000420077 CCNB3Q8WWL7 1395 aa24.96■■□□□ 1.59
SEMA4F-204ENST00000420077 CLSPNQ9HAW4 1339 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms