RNA–Protein interactions for RNA: ENST00000416196.1

AP1B1P2-201, Transcript of AP1B1 pseudogene 2, humanhuman

BASIC

Gene AP1B1P2, Length 106 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1B1P2-201ENST00000416196 DNAJC5BQ9UF47 199 aa4.58□□□□□ -1.68
AP1B1P2-201ENST00000416196 DNAJC5Q9H3Z4 198 aa4.45□□□□□ -1.7
AP1B1P2-201ENST00000416196 ABCC9O60706 1549 aa4.41□□□□□ -1.7
AP1B1P2-201ENST00000416196 NISCHQ9Y2I1 1504 aa4.38□□□□□ -1.71
AP1B1P2-201ENST00000416196 PABPN1Q86U42 306 aaKnown RBP eCLIP4.08□□□□□ -1.76
AP1B1P2-201ENST00000416196 CCDC180Q9P1Z9 1646 aa4.06□□□□□ -1.76
AP1B1P2-201ENST00000416196 RB1CC1Q8TDY2 1594 aa4.03□□□□□ -1.76
AP1B1P2-201ENST00000416196 TRIM41Q8WV44 630 aa4.02□□□□□ -1.77
AP1B1P2-201ENST00000416196 CECR2Q9BXF3 1484 aa4.02□□□□□ -1.77
AP1B1P2-201ENST00000416196 UNC13AQ9UPW8 1703 aa3.99□□□□□ -1.77
AP1B1P2-201ENST00000416196 BICRAQ9NZM4 1560 aa3.99□□□□□ -1.77
AP1B1P2-201ENST00000416196 CC2D2AQ9P2K1 1620 aa3.99□□□□□ -1.77
AP1B1P2-201ENST00000416196 CUX2O14529 1486 aa3.96□□□□□ -1.78
AP1B1P2-201ENST00000416196 NACADO15069 1562 aa3.93□□□□□ -1.78
AP1B1P2-201ENST00000416196 EIF4G1Q04637 1599 aaKnown RBP3.88□□□□□ -1.79
AP1B1P2-201ENST00000416196 AEBP2Q6ZN18 517 aaPredicted RBP3.86□□□□□ -1.79
AP1B1P2-201ENST00000416196 ILDR1Q86SU0 546 aaPredicted RBP3.85□□□□□ -1.79
AP1B1P2-201ENST00000416196 SHROOM4Q9ULL8 1493 aa3.83□□□□□ -1.8
AP1B1P2-201ENST00000416196 DCAF8L2P0C7V8 631 aa3.82□□□□□ -1.8
AP1B1P2-201ENST00000416196 ERCC6Q03468 1493 aa3.79□□□□□ -1.8
AP1B1P2-201ENST00000416196 MYO15BQ96JP2 1530 aa3.78□□□□□ -1.8
AP1B1P2-201ENST00000416196 OSCARQ8IYS5 282 aa3.75□□□□□ -1.81
AP1B1P2-201ENST00000416196 THOC2Q8NI27 1593 aaKnown RBP3.73□□□□□ -1.81
AP1B1P2-201ENST00000416196 RIMBP3CA6NJZ7 1639 aa3.72□□□□□ -1.81
AP1B1P2-201ENST00000416196 RIMBP3BA6NNM3 1639 aa3.72□□□□□ -1.81
AP1B1P2-201ENST00000416196 RIMBP3Q9UFD9 1639 aa3.72□□□□□ -1.81
AP1B1P2-201ENST00000416196 NESP48681 1621 aa3.71□□□□□ -1.82
AP1B1P2-201ENST00000416196 TRHP20396 242 aaPredicted RBP3.71□□□□□ -1.82
AP1B1P2-201ENST00000416196 BAZ1AQ9NRL2 1556 aaPredicted RBP3.68□□□□□ -1.82
AP1B1P2-201ENST00000416196 CYB5RLQ6IPT4 315 aa3.68□□□□□ -1.82
AP1B1P2-201ENST00000416196 SCRIBQ14160 1630 aa3.68□□□□□ -1.82
AP1B1P2-201ENST00000416196 NCAPD3P42695 1498 aa3.67□□□□□ -1.82
AP1B1P2-201ENST00000416196 ARHGEF11O15085 1522 aa3.65□□□□□ -1.82
AP1B1P2-201ENST00000416196 KIF21AQ7Z4S6 1674 aa3.64□□□□□ -1.83
AP1B1P2-201ENST00000416196 SMARCA2P51531 1590 aa3.62□□□□□ -1.83
AP1B1P2-201ENST00000416196 KDM4FA0A1W2PPD8 638 aa3.61□□□□□ -1.83
AP1B1P2-201ENST00000416196 ARAP1Q96P48 1450 aa3.6□□□□□ -1.83
AP1B1P2-201ENST00000416196 LAMC3Q9Y6N6 1575 aa3.6□□□□□ -1.83
AP1B1P2-201ENST00000416196 SOCS7O14512 581 aa3.6□□□□□ -1.83
AP1B1P2-201ENST00000416196 PDS5BQ9NTI5 1447 aa3.6□□□□□ -1.83
AP1B1P2-201ENST00000416196 WDR62O43379 1518 aa3.6□□□□□ -1.83
AP1B1P2-201ENST00000416196 DCAF1Q9Y4B6 1507 aa3.6□□□□□ -1.83
AP1B1P2-201ENST00000416196 ATAD2BQ9ULI0 1458 aa3.59□□□□□ -1.84
AP1B1P2-201ENST00000416196 ILDR2Q71H61 639 aa3.58□□□□□ -1.84
AP1B1P2-201ENST00000416196 FBXO41Q8TF61 875 aa3.58□□□□□ -1.84
AP1B1P2-201ENST00000416196 MRC2Q9UBG0 1479 aa3.57□□□□□ -1.84
AP1B1P2-201ENST00000416196 HMGXB3Q12766 1538 aa3.56□□□□□ -1.84
AP1B1P2-201ENST00000416196 LMTK3Q96Q04 1460 aa3.56□□□□□ -1.84
AP1B1P2-201ENST00000416196 ZCCHC6Q5VYS8 1495 aaKnown RBP3.53□□□□□ -1.84
AP1B1P2-201ENST00000416196 CADPSQ9ULU8 1353 aa3.52□□□□□ -1.85
AP1B1P2-201ENST00000416196 RSF1Q96T23 1441 aaPredicted RBP3.52□□□□□ -1.85
AP1B1P2-201ENST00000416196 ERCC6L2Q5T890 1561 aa3.51□□□□□ -1.85
AP1B1P2-201ENST00000416196 SMARCA4P51532 1647 aa3.51□□□□□ -1.85
AP1B1P2-201ENST00000416196 ZNF608Q9ULD9 1512 aaPredicted RBP3.49□□□□□ -1.85
AP1B1P2-201ENST00000416196 BAZ1BQ9UIG0 1483 aaKnown RBP3.49□□□□□ -1.85
AP1B1P2-201ENST00000416196 HECW2Q9P2P5 1572 aa3.48□□□□□ -1.85
AP1B1P2-201ENST00000416196 CEP164Q9UPV0 1460 aa3.47□□□□□ -1.85
AP1B1P2-201ENST00000416196 CHD1O14646 1710 aa3.47□□□□□ -1.85
AP1B1P2-201ENST00000416196 KIF13AQ9H1H9 1805 aa3.47□□□□□ -1.85
AP1B1P2-201ENST00000416196 URB2Q14146 1524 aaKnown RBP3.47□□□□□ -1.85
AP1B1P2-201ENST00000416196 PEG3Q9GZU2 1588 aa3.46□□□□□ -1.85
AP1B1P2-201ENST00000416196 DISP3Q9P2K9 1392 aa3.46□□□□□ -1.86
AP1B1P2-201ENST00000416196 SYNJ2O15056 1496 aa3.46□□□□□ -1.86
AP1B1P2-201ENST00000416196 FANCD2Q9BXW9 1451 aa3.46□□□□□ -1.86
AP1B1P2-201ENST00000416196 CLASP1Q7Z460 1538 aa3.44□□□□□ -1.86
AP1B1P2-201ENST00000416196 IFT140Q96RY7 1462 aa3.43□□□□□ -1.86
AP1B1P2-201ENST00000416196 AQRO60306 1485 aaKnown RBP eCLIP3.42□□□□□ -1.86
AP1B1P2-201ENST00000416196 GAPVD1Q14C86 1478 aa3.42□□□□□ -1.86
AP1B1P2-201ENST00000416196 FBLN2P98095 1184 aa3.42□□□□□ -1.86
AP1B1P2-201ENST00000416196 EIF4G3O43432 1585 aaKnown RBP3.42□□□□□ -1.86
AP1B1P2-201ENST00000416196 ADGRL1O94910 1474 aa3.41□□□□□ -1.86
AP1B1P2-201ENST00000416196 CFTRP13569 1480 aa3.41□□□□□ -1.86
AP1B1P2-201ENST00000416196 FAM69CQ0P6D2 419 aa3.39□□□□□ -1.87
AP1B1P2-201ENST00000416196 MROH2BQ7Z745 1585 aa3.38□□□□□ -1.87
AP1B1P2-201ENST00000416196 KDM6BO15054 1643 aa3.38□□□□□ -1.87
AP1B1P2-201ENST00000416196 TARBP1Q13395 1621 aaKnown RBP3.38□□□□□ -1.87
AP1B1P2-201ENST00000416196 ABCC10Q5T3U5 1492 aa3.38□□□□□ -1.87
AP1B1P2-201ENST00000416196 SYNJ1O43426 1573 aa3.37□□□□□ -1.87
AP1B1P2-201ENST00000416196 TOPBP1Q92547 1522 aa3.36□□□□□ -1.87
AP1B1P2-201ENST00000416196 CERKQ8TCT0 537 aa3.36□□□□□ -1.87
AP1B1P2-201ENST00000416196 CHMP7Q8WUX9 453 aaPredicted RBP3.36□□□□□ -1.87
AP1B1P2-201ENST00000416196 SPATA31D1Q6ZQQ2 1576 aa3.36□□□□□ -1.87
AP1B1P2-201ENST00000416196 TSPOAP1O95153 1857 aa3.35□□□□□ -1.87
AP1B1P2-201ENST00000416196 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
AP1B1P2-201ENST00000416196 DIP2BQ9P265 1576 aa3.34□□□□□ -1.87
AP1B1P2-201ENST00000416196 SNAPC4Q5SXM2 1469 aa3.34□□□□□ -1.88
AP1B1P2-201ENST00000416196 TDRD9Q8NDG6 1382 aaKnown RBP3.33□□□□□ -1.88
AP1B1P2-201ENST00000416196 MAGI1Q96QZ7 1491 aaPredicted RBP3.32□□□□□ -1.88
AP1B1P2-201ENST00000416196 MAPKBP1O60336 1514 aa3.32□□□□□ -1.88
AP1B1P2-201ENST00000416196 ABCC8Q09428 1581 aa3.32□□□□□ -1.88
AP1B1P2-201ENST00000416196 SRCAPQ6ZRS2 3230 aa3.32□□□□□ -1.88
AP1B1P2-201ENST00000416196 PRDM2Q13029 1718 aa3.31□□□□□ -1.88
AP1B1P2-201ENST00000416196 PPRC1Q5VV67 1664 aaKnown RBP3.31□□□□□ -1.88
AP1B1P2-201ENST00000416196 CEP170Q5SW79 1584 aa3.31□□□□□ -1.88
AP1B1P2-201ENST00000416196 WIZO95785 1651 aa3.3□□□□□ -1.88
AP1B1P2-201ENST00000416196 TOP2BQ02880 1626 aa3.3□□□□□ -1.88
AP1B1P2-201ENST00000416196 POLA1P09884 1462 aaPredicted RBP3.3□□□□□ -1.88
AP1B1P2-201ENST00000416196 RAD54L2Q9Y4B4 1467 aa3.3□□□□□ -1.88
AP1B1P2-201ENST00000416196 SHROOM2Q13796 1616 aa3.3□□□□□ -1.88
AP1B1P2-201ENST00000416196 DNMBPQ6XZF7 1577 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms