RNA–Protein interactions for RNA: ENST00000413807.6

PCLO-202, Transcript of piccolo presynaptic cytomatrix protein, humanhuman

TSL 5

Gene PCLO, Length 748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLO-202ENST00000413807 AEBP2Q6ZN18 517 aaPredicted RBP18.5■□□□□ 0.55
PCLO-202ENST00000413807 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
PCLO-202ENST00000413807 NISCHQ9Y2I1 1504 aa16.85■□□□□ 0.29
PCLO-202ENST00000413807 SENP3Q9H4L4 574 aaPredicted RBP15.74■□□□□ 0.11
PCLO-202ENST00000413807 PHF23Q9BUL5 403 aaPredicted RBP15.54■□□□□ 0.08
PCLO-202ENST00000413807 CCDC180Q9P1Z9 1646 aa14.78□□□□□ -0.04
PCLO-202ENST00000413807 FOXD1Q16676 465 aa14.76□□□□□ -0.05
PCLO-202ENST00000413807 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
PCLO-202ENST00000413807 DCAF1Q9Y4B6 1507 aa14.03□□□□□ -0.16
PCLO-202ENST00000413807 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
PCLO-202ENST00000413807 ABCC9O60706 1549 aa13.95□□□□□ -0.18
PCLO-202ENST00000413807 MYO15BQ96JP2 1530 aa13.94□□□□□ -0.18
PCLO-202ENST00000413807 MSH5O43196 834 aa13.83□□□□□ -0.2
PCLO-202ENST00000413807 NACADO15069 1562 aa13.79□□□□□ -0.2
PCLO-202ENST00000413807 PIAS4Q8N2W9 510 aaPredicted RBP13.72□□□□□ -0.21
PCLO-202ENST00000413807 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
PCLO-202ENST00000413807 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
PCLO-202ENST00000413807 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
PCLO-202ENST00000413807 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
PCLO-202ENST00000413807 ADRA2BP18089 450 aa13.57□□□□□ -0.24
PCLO-202ENST00000413807 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
PCLO-202ENST00000413807 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
PCLO-202ENST00000413807 UNC13AQ9UPW8 1703 aa13.39□□□□□ -0.27
PCLO-202ENST00000413807 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
PCLO-202ENST00000413807 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCLO-202ENST00000413807 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
PCLO-202ENST00000413807 RSF1Q96T23 1441 aaPredicted RBP13.01□□□□□ -0.33
PCLO-202ENST00000413807 BAZ1AQ9NRL2 1556 aaPredicted RBP13□□□□□ -0.33
PCLO-202ENST00000413807 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
PCLO-202ENST00000413807 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
PCLO-202ENST00000413807 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.35
PCLO-202ENST00000413807 SUPT5HO00267 1087 aaKnown RBP12.87□□□□□ -0.35
PCLO-202ENST00000413807 EIF4G1Q04637 1599 aaKnown RBP12.86□□□□□ -0.35
PCLO-202ENST00000413807 WIZO95785 1651 aa12.83□□□□□ -0.36
PCLO-202ENST00000413807 ATAD2BQ9ULI0 1458 aa12.79□□□□□ -0.36
PCLO-202ENST00000413807 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
PCLO-202ENST00000413807 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
PCLO-202ENST00000413807 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
PCLO-202ENST00000413807 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
PCLO-202ENST00000413807 CC2D2AQ9P2K1 1620 aa12.68□□□□□ -0.38
PCLO-202ENST00000413807 BAZ1BQ9UIG0 1483 aaKnown RBP12.65□□□□□ -0.38
PCLO-202ENST00000413807 CCDC88BA6NC98 1476 aa12.59□□□□□ -0.39
PCLO-202ENST00000413807 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
PCLO-202ENST00000413807 DNAJC5BQ9UF47 199 aa12.48□□□□□ -0.41
PCLO-202ENST00000413807 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
PCLO-202ENST00000413807 CFTRP13569 1480 aa12.41□□□□□ -0.42
PCLO-202ENST00000413807 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
PCLO-202ENST00000413807 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
PCLO-202ENST00000413807 SCAF1Q9H7N4 1312 aaKnown RBP12.31□□□□□ -0.44
PCLO-202ENST00000413807 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
PCLO-202ENST00000413807 NESP48681 1621 aa12.22□□□□□ -0.45
PCLO-202ENST00000413807 ABCC8Q09428 1581 aa12.21□□□□□ -0.46
PCLO-202ENST00000413807 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
PCLO-202ENST00000413807 FANCD2Q9BXW9 1451 aa12.19□□□□□ -0.46
PCLO-202ENST00000413807 PDS5BQ9NTI5 1447 aa12.18□□□□□ -0.46
PCLO-202ENST00000413807 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
PCLO-202ENST00000413807 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
PCLO-202ENST00000413807 BIVM-ERCC5R4GMW8 1640 aa12.16□□□□□ -0.46
PCLO-202ENST00000413807 SYNJ1O43426 1573 aa12.16□□□□□ -0.46
PCLO-202ENST00000413807 CUX1P39880 1505 aa12.14□□□□□ -0.47
PCLO-202ENST00000413807 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
PCLO-202ENST00000413807 KIF21AQ7Z4S6 1674 aa12.1□□□□□ -0.47
PCLO-202ENST00000413807 DNMBPQ6XZF7 1577 aa12.08□□□□□ -0.48
PCLO-202ENST00000413807 URB2Q14146 1524 aaKnown RBP12.06□□□□□ -0.48
PCLO-202ENST00000413807 CACNB1Q02641 598 aaPredicted RBP12.06□□□□□ -0.48
PCLO-202ENST00000413807 TOPBP1Q92547 1522 aa12.06□□□□□ -0.48
PCLO-202ENST00000413807 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.48
PCLO-202ENST00000413807 EEA1Q15075 1411 aa12.01□□□□□ -0.49
PCLO-202ENST00000413807 DCAF8L1A6NGE4 600 aa12□□□□□ -0.49
PCLO-202ENST00000413807 FGD5Q6ZNL6 1462 aa12□□□□□ -0.49
PCLO-202ENST00000413807 WDR62O43379 1518 aa12□□□□□ -0.49
PCLO-202ENST00000413807 SOGA1O94964 1423 aa11.99□□□□□ -0.49
PCLO-202ENST00000413807 POLA1P09884 1462 aaPredicted RBP11.99□□□□□ -0.49
PCLO-202ENST00000413807 PPP4R3CPQ6ZMV5 832 aa11.98□□□□□ -0.49
PCLO-202ENST00000413807 THOC2Q8NI27 1593 aaKnown RBP11.97□□□□□ -0.49
PCLO-202ENST00000413807 ABCA10Q8WWZ4 1543 aa11.96□□□□□ -0.5
PCLO-202ENST00000413807 RUSC2Q8N2Y8 1516 aa11.95□□□□□ -0.5
PCLO-202ENST00000413807 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
PCLO-202ENST00000413807 CUX2O14529 1486 aa11.93□□□□□ -0.5
PCLO-202ENST00000413807 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
PCLO-202ENST00000413807 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
PCLO-202ENST00000413807 KIF27Q86VH2 1401 aa11.91□□□□□ -0.5
PCLO-202ENST00000413807 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
PCLO-202ENST00000413807 HOXD11P31277 338 aaPredicted RBP11.9□□□□□ -0.5
PCLO-202ENST00000413807 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
PCLO-202ENST00000413807 IGF1RP08069 1367 aa11.87□□□□□ -0.51
PCLO-202ENST00000413807 IFT140Q96RY7 1462 aa11.87□□□□□ -0.51
PCLO-202ENST00000413807 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
PCLO-202ENST00000413807 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
PCLO-202ENST00000413807 KIF21BO75037 1637 aa11.85□□□□□ -0.51
PCLO-202ENST00000413807 FAM9AQ8IZU1 332 aaPredicted RBP11.84□□□□□ -0.51
PCLO-202ENST00000413807 LOC105371045A0A1W2PR82 267 aa11.82□□□□□ -0.52
PCLO-202ENST00000413807 RNF39Q9H2S5 420 aa11.82□□□□□ -0.52
PCLO-202ENST00000413807 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
PCLO-202ENST00000413807 GAPVD1Q14C86 1478 aa11.8□□□□□ -0.52
PCLO-202ENST00000413807 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
PCLO-202ENST00000413807 GOLGA3Q08378 1498 aa11.77□□□□□ -0.52
PCLO-202ENST00000413807 ZNF608Q9ULD9 1512 aaPredicted RBP11.77□□□□□ -0.52
PCLO-202ENST00000413807 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
PCLO-202ENST00000413807 CUL7Q14999 1698 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms