RNA–Protein interactions for RNA: ENST00000411566.5

LCA5L-204, Transcript of LCA5L, lebercilin like, humanhuman

TSL 5

Gene LCA5L, Length 808 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-204ENST00000411566 AEBP2Q6ZN18 517 aaPredicted RBP26.89■■□□□ 1.9
LCA5L-204ENST00000411566 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
LCA5L-204ENST00000411566 NISCHQ9Y2I1 1504 aa23.28■■□□□ 1.32
LCA5L-204ENST00000411566 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
LCA5L-204ENST00000411566 PHF23Q9BUL5 403 aaPredicted RBP22.75■■□□□ 1.23
LCA5L-204ENST00000411566 FOXD1Q16676 465 aa21.43■■□□□ 1.02
LCA5L-204ENST00000411566 ABCC9O60706 1549 aa21.38■■□□□ 1.01
LCA5L-204ENST00000411566 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
LCA5L-204ENST00000411566 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
LCA5L-204ENST00000411566 DNAJC5BQ9UF47 199 aa20.37■□□□□ 0.85
LCA5L-204ENST00000411566 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
LCA5L-204ENST00000411566 MSH5O43196 834 aa20.19■□□□□ 0.82
LCA5L-204ENST00000411566 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
LCA5L-204ENST00000411566 PIAS4Q8N2W9 510 aaPredicted RBP20.12■□□□□ 0.81
LCA5L-204ENST00000411566 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
LCA5L-204ENST00000411566 ADRA2BP18089 450 aa19.98■□□□□ 0.79
LCA5L-204ENST00000411566 NACADO15069 1562 aa19.97■□□□□ 0.79
LCA5L-204ENST00000411566 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
LCA5L-204ENST00000411566 PABPN1Q86U42 306 aaKnown RBP eCLIP19.92■□□□□ 0.78
LCA5L-204ENST00000411566 MYO15BQ96JP2 1530 aa19.59■□□□□ 0.73
LCA5L-204ENST00000411566 BICRAQ9NZM4 1560 aa19.52■□□□□ 0.71
LCA5L-204ENST00000411566 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
LCA5L-204ENST00000411566 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
LCA5L-204ENST00000411566 CECR2Q9BXF3 1484 aa19.32■□□□□ 0.68
LCA5L-204ENST00000411566 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
LCA5L-204ENST00000411566 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
LCA5L-204ENST00000411566 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
LCA5L-204ENST00000411566 EIF4G1Q04637 1599 aaKnown RBP19.12■□□□□ 0.65
LCA5L-204ENST00000411566 SCRIBQ14160 1630 aa19.1■□□□□ 0.65
LCA5L-204ENST00000411566 DNAJC5Q9H3Z4 198 aa19.01■□□□□ 0.63
LCA5L-204ENST00000411566 CUX2O14529 1486 aa18.59■□□□□ 0.57
LCA5L-204ENST00000411566 ERCC6Q03468 1493 aa18.55■□□□□ 0.56
LCA5L-204ENST00000411566 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
LCA5L-204ENST00000411566 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
LCA5L-204ENST00000411566 ATAD2BQ9ULI0 1458 aa18.35■□□□□ 0.53
LCA5L-204ENST00000411566 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
LCA5L-204ENST00000411566 SMARCA2P51531 1590 aa18.29■□□□□ 0.52
LCA5L-204ENST00000411566 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
LCA5L-204ENST00000411566 HMGXB3Q12766 1538 aa18.25■□□□□ 0.51
LCA5L-204ENST00000411566 NESP48681 1621 aa18.23■□□□□ 0.51
LCA5L-204ENST00000411566 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
LCA5L-204ENST00000411566 SMARCA4P51532 1647 aa18.17■□□□□ 0.5
LCA5L-204ENST00000411566 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
LCA5L-204ENST00000411566 PDS5BQ9NTI5 1447 aa18.07■□□□□ 0.48
LCA5L-204ENST00000411566 TRIM41Q8WV44 630 aa18.07■□□□□ 0.48
LCA5L-204ENST00000411566 LAMC3Q9Y6N6 1575 aa18.06■□□□□ 0.48
LCA5L-204ENST00000411566 THOC2Q8NI27 1593 aaKnown RBP18.04■□□□□ 0.48
LCA5L-204ENST00000411566 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
LCA5L-204ENST00000411566 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
LCA5L-204ENST00000411566 CADPSQ9ULU8 1353 aa17.93■□□□□ 0.46
LCA5L-204ENST00000411566 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
LCA5L-204ENST00000411566 KIF21AQ7Z4S6 1674 aa17.88■□□□□ 0.45
LCA5L-204ENST00000411566 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
LCA5L-204ENST00000411566 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
LCA5L-204ENST00000411566 WDR62O43379 1518 aa17.78■□□□□ 0.44
LCA5L-204ENST00000411566 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
LCA5L-204ENST00000411566 FANCD2Q9BXW9 1451 aa17.69■□□□□ 0.42
LCA5L-204ENST00000411566 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
LCA5L-204ENST00000411566 WIZO95785 1651 aa17.62■□□□□ 0.41
LCA5L-204ENST00000411566 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
LCA5L-204ENST00000411566 CFTRP13569 1480 aa17.62■□□□□ 0.41
LCA5L-204ENST00000411566 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
LCA5L-204ENST00000411566 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
LCA5L-204ENST00000411566 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
LCA5L-204ENST00000411566 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
LCA5L-204ENST00000411566 CACNB1Q02641 598 aaPredicted RBP17.46■□□□□ 0.39
LCA5L-204ENST00000411566 TOP2AP11388 1531 aaKnown RBP17.44■□□□□ 0.38
LCA5L-204ENST00000411566 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
LCA5L-204ENST00000411566 IFT140Q96RY7 1462 aa17.42■□□□□ 0.38
LCA5L-204ENST00000411566 RIMBP3CA6NJZ7 1639 aa17.39■□□□□ 0.38
LCA5L-204ENST00000411566 RIMBP3BA6NNM3 1639 aa17.39■□□□□ 0.38
LCA5L-204ENST00000411566 RIMBP3Q9UFD9 1639 aa17.39■□□□□ 0.38
LCA5L-204ENST00000411566 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
LCA5L-204ENST00000411566 ARHGEF11O15085 1522 aa17.37■□□□□ 0.37
LCA5L-204ENST00000411566 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
LCA5L-204ENST00000411566 TRHP20396 242 aaPredicted RBP17.34■□□□□ 0.37
LCA5L-204ENST00000411566 ABCC8Q09428 1581 aa17.3■□□□□ 0.36
LCA5L-204ENST00000411566 TOPBP1Q92547 1522 aa17.29■□□□□ 0.36
LCA5L-204ENST00000411566 FBLN2P98095 1184 aa17.28■□□□□ 0.36
LCA5L-204ENST00000411566 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
LCA5L-204ENST00000411566 AQRO60306 1485 aaKnown RBP eCLIP17.21■□□□□ 0.35
LCA5L-204ENST00000411566 PRDM2Q13029 1718 aa17.2■□□□□ 0.34
LCA5L-204ENST00000411566 EIF4G3O43432 1585 aaKnown RBP17.19■□□□□ 0.34
LCA5L-204ENST00000411566 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
LCA5L-204ENST00000411566 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
LCA5L-204ENST00000411566 RNF39Q9H2S5 420 aa17.14■□□□□ 0.33
LCA5L-204ENST00000411566 CHMP7Q8WUX9 453 aaPredicted RBP17.1■□□□□ 0.33
LCA5L-204ENST00000411566 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
LCA5L-204ENST00000411566 TDRD9Q8NDG6 1382 aaKnown RBP17.09■□□□□ 0.33
LCA5L-204ENST00000411566 TARBP1Q13395 1621 aaKnown RBP17.09■□□□□ 0.33
LCA5L-204ENST00000411566 SOGA1O94964 1423 aa17.08■□□□□ 0.32
LCA5L-204ENST00000411566 CHD1O14646 1710 aa17.07■□□□□ 0.32
LCA5L-204ENST00000411566 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
LCA5L-204ENST00000411566 SNAPC4Q5SXM2 1469 aa17.01■□□□□ 0.31
LCA5L-204ENST00000411566 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
LCA5L-204ENST00000411566 MAGI1Q96QZ7 1491 aaPredicted RBP16.97■□□□□ 0.31
LCA5L-204ENST00000411566 SYNJ1O43426 1573 aa16.97■□□□□ 0.31
LCA5L-204ENST00000411566 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
LCA5L-204ENST00000411566 GRIN2BQ13224 1484 aa16.95■□□□□ 0.3
LCA5L-204ENST00000411566 CLASP1Q7Z460 1538 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms