RNA–Protein interactions for RNA: ENST00000398985.1

KSR1-203, Transcript of kinase suppressor of ras 1, humanhuman

TSL 2

Gene KSR1, Length 2,527 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KSR1-203ENST00000398985 NISCHQ9Y2I1 1504 aa32.93■■■□□ 2.86
KSR1-203ENST00000398985 CCDC180Q9P1Z9 1646 aa28.92■■■□□ 2.22
KSR1-203ENST00000398985 ABCC9O60706 1549 aa27.92■■■□□ 2.06
KSR1-203ENST00000398985 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
KSR1-203ENST00000398985 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
KSR1-203ENST00000398985 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
KSR1-203ENST00000398985 NACADO15069 1562 aa27.09■■□□□ 1.93
KSR1-203ENST00000398985 MYO15BQ96JP2 1530 aa27.07■■□□□ 1.92
KSR1-203ENST00000398985 RB1CC1Q8TDY2 1594 aa26.99■■□□□ 1.91
KSR1-203ENST00000398985 SHROOM4Q9ULL8 1493 aa26.65■■□□□ 1.86
KSR1-203ENST00000398985 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
KSR1-203ENST00000398985 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
KSR1-203ENST00000398985 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
KSR1-203ENST00000398985 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
KSR1-203ENST00000398985 BICRAQ9NZM4 1560 aa26.2■■□□□ 1.78
KSR1-203ENST00000398985 HRCP23327 699 aa26.2■■□□□ 1.78
KSR1-203ENST00000398985 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.73
KSR1-203ENST00000398985 PCGF6Q9BYE7 350 aa25.84■■□□□ 1.73
KSR1-203ENST00000398985 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
KSR1-203ENST00000398985 PPARGC1BQ86YN6 1023 aaKnown RBP25.67■■□□□ 1.7
KSR1-203ENST00000398985 BAZ1AQ9NRL2 1556 aaPredicted RBP25.46■■□□□ 1.67
KSR1-203ENST00000398985 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
KSR1-203ENST00000398985 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
KSR1-203ENST00000398985 SMARCA4P51532 1647 aa25.42■■□□□ 1.66
KSR1-203ENST00000398985 RSF1Q96T23 1441 aaPredicted RBP25.36■■□□□ 1.65
KSR1-203ENST00000398985 LOC105371045A0A1W2PR82 267 aa25.27■■□□□ 1.64
KSR1-203ENST00000398985 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
KSR1-203ENST00000398985 WIZO95785 1651 aa25.2■■□□□ 1.62
KSR1-203ENST00000398985 DNAJC5BQ9UF47 199 aa25.17■■□□□ 1.62
KSR1-203ENST00000398985 ATAD2BQ9ULI0 1458 aa25.16■■□□□ 1.62
KSR1-203ENST00000398985 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
KSR1-203ENST00000398985 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
KSR1-203ENST00000398985 TRIM26Q12899 539 aaPredicted RBP25.1■■□□□ 1.61
KSR1-203ENST00000398985 NCAPD3P42695 1498 aa25.02■■□□□ 1.6
KSR1-203ENST00000398985 BAZ1BQ9UIG0 1483 aaKnown RBP24.98■■□□□ 1.59
KSR1-203ENST00000398985 HMGXB3Q12766 1538 aa24.92■■□□□ 1.58
KSR1-203ENST00000398985 TOP2AP11388 1531 aaKnown RBP24.9■■□□□ 1.58
KSR1-203ENST00000398985 ZEB1P37275 1124 aaPredicted RBP24.79■■□□□ 1.56
KSR1-203ENST00000398985 PELP1Q8IZL8 1130 aaKnown RBP24.76■■□□□ 1.55
KSR1-203ENST00000398985 CCDC88BA6NC98 1476 aa24.67■■□□□ 1.54
KSR1-203ENST00000398985 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
KSR1-203ENST00000398985 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
KSR1-203ENST00000398985 FAM9AQ8IZU1 332 aaPredicted RBP24.45■■□□□ 1.51
KSR1-203ENST00000398985 CADPSQ9ULU8 1353 aa24.37■■□□□ 1.49
KSR1-203ENST00000398985 NESP48681 1621 aa24.35■■□□□ 1.49
KSR1-203ENST00000398985 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
KSR1-203ENST00000398985 CFTRP13569 1480 aa24.33■■□□□ 1.48
KSR1-203ENST00000398985 LAMC3Q9Y6N6 1575 aa24.24■■□□□ 1.47
KSR1-203ENST00000398985 ACIN1Q9UKV3 1341 aaKnown RBP24.11■■□□□ 1.45
KSR1-203ENST00000398985 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
KSR1-203ENST00000398985 PDS5BQ9NTI5 1447 aa24.1■■□□□ 1.45
KSR1-203ENST00000398985 FANCD2Q9BXW9 1451 aa24.09■■□□□ 1.45
KSR1-203ENST00000398985 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
KSR1-203ENST00000398985 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
KSR1-203ENST00000398985 CCER1Q8TC90 406 aaPredicted RBP24.03■■□□□ 1.44
KSR1-203ENST00000398985 KIF21AQ7Z4S6 1674 aa24■■□□□ 1.43
KSR1-203ENST00000398985 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
KSR1-203ENST00000398985 ERCC6Q03468 1493 aa23.98■■□□□ 1.43
KSR1-203ENST00000398985 CEP164Q9UPV0 1460 aa23.98■■□□□ 1.43
KSR1-203ENST00000398985 GTF3C3Q9Y5Q9 886 aa23.9■■□□□ 1.42
KSR1-203ENST00000398985 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.42
KSR1-203ENST00000398985 WRNQ14191 1432 aaPredicted RBP eCLIP23.89■■□□□ 1.41
KSR1-203ENST00000398985 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
KSR1-203ENST00000398985 URB2Q14146 1524 aaKnown RBP23.82■■□□□ 1.4
KSR1-203ENST00000398985 CUX1P39880 1505 aa23.81■■□□□ 1.4
KSR1-203ENST00000398985 MRC2Q9UBG0 1479 aa23.81■■□□□ 1.4
KSR1-203ENST00000398985 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
KSR1-203ENST00000398985 TOPBP1Q92547 1522 aa23.76■■□□□ 1.39
KSR1-203ENST00000398985 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
KSR1-203ENST00000398985 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
KSR1-203ENST00000398985 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
KSR1-203ENST00000398985 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
KSR1-203ENST00000398985 WDR62O43379 1518 aa23.7■■□□□ 1.38
KSR1-203ENST00000398985 BIVM-ERCC5R4GMW8 1640 aa23.69■■□□□ 1.38
KSR1-203ENST00000398985 MYT1Q01538 1121 aa23.68■■□□□ 1.38
KSR1-203ENST00000398985 FGD5Q6ZNL6 1462 aa23.64■■□□□ 1.38
KSR1-203ENST00000398985 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
KSR1-203ENST00000398985 RAD54L2Q9Y4B4 1467 aa23.56■■□□□ 1.36
KSR1-203ENST00000398985 SOGA1O94964 1423 aa23.54■■□□□ 1.36
KSR1-203ENST00000398985 CUX2O14529 1486 aa23.54■■□□□ 1.36
KSR1-203ENST00000398985 ZNF316A6NFI3 1004 aaPredicted RBP23.52■■□□□ 1.35
KSR1-203ENST00000398985 YTHDC1Q96MU7 727 aaKnown RBP23.48■■□□□ 1.35
KSR1-203ENST00000398985 CEP162Q5TB80 1403 aa23.46■■□□□ 1.35
KSR1-203ENST00000398985 TARBP1Q13395 1621 aaKnown RBP23.43■■□□□ 1.34
KSR1-203ENST00000398985 IFT140Q96RY7 1462 aa23.43■■□□□ 1.34
KSR1-203ENST00000398985 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
KSR1-203ENST00000398985 TDRD9Q8NDG6 1382 aaKnown RBP23.39■■□□□ 1.34
KSR1-203ENST00000398985 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
KSR1-203ENST00000398985 ZNF608Q9ULD9 1512 aaPredicted RBP23.37■■□□□ 1.33
KSR1-203ENST00000398985 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
KSR1-203ENST00000398985 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.33
KSR1-203ENST00000398985 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.32
KSR1-203ENST00000398985 KIF27Q86VH2 1401 aa23.32■■□□□ 1.32
KSR1-203ENST00000398985 MIER1Q8N108 512 aa23.31■■□□□ 1.32
KSR1-203ENST00000398985 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
KSR1-203ENST00000398985 GAPVD1Q14C86 1478 aa23.26■■□□□ 1.31
KSR1-203ENST00000398985 ABCA5Q8WWZ7 1642 aa23.25■■□□□ 1.31
KSR1-203ENST00000398985 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
KSR1-203ENST00000398985 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
KSR1-203ENST00000398985 EEA1Q15075 1411 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms