RNA–Protein interactions for RNA: ENST00000396417.2

SEPT3-201, Transcript of septin 3, humanhuman

TSL 1 (best)

Gene SEPT3, Length 1,896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPT3-201ENST00000396417 NISCHQ9Y2I1 1504 aa18.76■□□□□ 0.59
SEPT3-201ENST00000396417 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
SEPT3-201ENST00000396417 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
SEPT3-201ENST00000396417 MYT1Q01538 1121 aa15.86■□□□□ 0.13
SEPT3-201ENST00000396417 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
SEPT3-201ENST00000396417 HRCP23327 699 aa15.71■□□□□ 0.11
SEPT3-201ENST00000396417 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
SEPT3-201ENST00000396417 ABCC9O60706 1549 aa15.5■□□□□ 0.07
SEPT3-201ENST00000396417 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
SEPT3-201ENST00000396417 DCAF8L2P0C7V8 631 aa15.36■□□□□ 0.05
SEPT3-201ENST00000396417 NACADO15069 1562 aa15.25■□□□□ 0.03
SEPT3-201ENST00000396417 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
SEPT3-201ENST00000396417 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
SEPT3-201ENST00000396417 RB1CC1Q8TDY2 1594 aa15.11■□□□□ 0.01
SEPT3-201ENST00000396417 TTBK1Q5TCY1 1321 aaPredicted RBP15.11■□□□□ 0.01
SEPT3-201ENST00000396417 PPARGC1BQ86YN6 1023 aaKnown RBP15.06■□□□□ 0
SEPT3-201ENST00000396417 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
SEPT3-201ENST00000396417 SCRIBQ14160 1630 aa15.03■□□□□ -0
SEPT3-201ENST00000396417 PCGF6Q9BYE7 350 aa14.93□□□□□ -0.02
SEPT3-201ENST00000396417 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
SEPT3-201ENST00000396417 ZEB1P37275 1124 aaPredicted RBP14.76□□□□□ -0.05
SEPT3-201ENST00000396417 SUPT5HO00267 1087 aaKnown RBP14.65□□□□□ -0.06
SEPT3-201ENST00000396417 BICRAQ9NZM4 1560 aa14.64□□□□□ -0.07
SEPT3-201ENST00000396417 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
SEPT3-201ENST00000396417 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
SEPT3-201ENST00000396417 TRIM26Q12899 539 aaPredicted RBP14.54□□□□□ -0.08
SEPT3-201ENST00000396417 PABPN1Q86U42 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEPT3-201ENST00000396417 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
SEPT3-201ENST00000396417 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
SEPT3-201ENST00000396417 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
SEPT3-201ENST00000396417 CHIC1Q5VXU3 224 aa14.46□□□□□ -0.1
SEPT3-201ENST00000396417 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
SEPT3-201ENST00000396417 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
SEPT3-201ENST00000396417 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
SEPT3-201ENST00000396417 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
SEPT3-201ENST00000396417 WIZO95785 1651 aa14.38□□□□□ -0.11
SEPT3-201ENST00000396417 BCL11AQ9H165 835 aa14.36□□□□□ -0.11
SEPT3-201ENST00000396417 PEG3Q9GZU2 1588 aa14.28□□□□□ -0.12
SEPT3-201ENST00000396417 TOP2AP11388 1531 aaKnown RBP14.25□□□□□ -0.13
SEPT3-201ENST00000396417 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
SEPT3-201ENST00000396417 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
SEPT3-201ENST00000396417 PRKCSHP14314 528 aaPredicted RBP14.19□□□□□ -0.14
SEPT3-201ENST00000396417 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
SEPT3-201ENST00000396417 FAM9AQ8IZU1 332 aaPredicted RBP14.17□□□□□ -0.14
SEPT3-201ENST00000396417 ERICH6Q7L0X2 663 aa14.16□□□□□ -0.14
SEPT3-201ENST00000396417 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
SEPT3-201ENST00000396417 ANP32EQ9BTT0 268 aa14.12□□□□□ -0.15
SEPT3-201ENST00000396417 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
SEPT3-201ENST00000396417 HMGXB3Q12766 1538 aa14.07□□□□□ -0.16
SEPT3-201ENST00000396417 CCDC88BA6NC98 1476 aa14.06□□□□□ -0.16
SEPT3-201ENST00000396417 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
SEPT3-201ENST00000396417 DIEXFQ68CQ4 756 aaKnown RBP14.04□□□□□ -0.16
SEPT3-201ENST00000396417 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
SEPT3-201ENST00000396417 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
SEPT3-201ENST00000396417 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
SEPT3-201ENST00000396417 APLP2Q06481 763 aa13.96□□□□□ -0.17
SEPT3-201ENST00000396417 TRIM41Q8WV44 630 aa13.84□□□□□ -0.19
SEPT3-201ENST00000396417 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
SEPT3-201ENST00000396417 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
SEPT3-201ENST00000396417 ABCC8Q09428 1581 aa13.77□□□□□ -0.2
SEPT3-201ENST00000396417 TSHZ2Q9NRE2 1034 aa13.74□□□□□ -0.21
SEPT3-201ENST00000396417 CFTRP13569 1480 aa13.74□□□□□ -0.21
SEPT3-201ENST00000396417 CCER1Q8TC90 406 aaPredicted RBP13.72□□□□□ -0.21
SEPT3-201ENST00000396417 ZNF316A6NFI3 1004 aaPredicted RBP13.71□□□□□ -0.21
SEPT3-201ENST00000396417 WRNQ14191 1432 aaPredicted RBP eCLIP13.69□□□□□ -0.22
SEPT3-201ENST00000396417 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
SEPT3-201ENST00000396417 SUPT16HQ9Y5B9 1047 aaKnown RBP13.65□□□□□ -0.22
SEPT3-201ENST00000396417 SYNJ1O43426 1573 aa13.65□□□□□ -0.22
SEPT3-201ENST00000396417 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
SEPT3-201ENST00000396417 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
SEPT3-201ENST00000396417 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
SEPT3-201ENST00000396417 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
SEPT3-201ENST00000396417 LAMC3Q9Y6N6 1575 aa13.6□□□□□ -0.23
SEPT3-201ENST00000396417 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
SEPT3-201ENST00000396417 MIER1Q8N108 512 aa13.56□□□□□ -0.24
SEPT3-201ENST00000396417 CUX1P39880 1505 aa13.54□□□□□ -0.24
SEPT3-201ENST00000396417 EEA1Q15075 1411 aa13.54□□□□□ -0.24
SEPT3-201ENST00000396417 NESP48681 1621 aa13.53□□□□□ -0.24
SEPT3-201ENST00000396417 FANCD2Q9BXW9 1451 aa13.53□□□□□ -0.24
SEPT3-201ENST00000396417 SOGA1O94964 1423 aa13.49□□□□□ -0.25
SEPT3-201ENST00000396417 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
SEPT3-201ENST00000396417 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
SEPT3-201ENST00000396417 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
SEPT3-201ENST00000396417 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
SEPT3-201ENST00000396417 KIF21AQ7Z4S6 1674 aa13.43□□□□□ -0.26
SEPT3-201ENST00000396417 ERICH6BQ5W0A0 696 aa13.4□□□□□ -0.26
SEPT3-201ENST00000396417 TOPBP1Q92547 1522 aa13.39□□□□□ -0.27
SEPT3-201ENST00000396417 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
SEPT3-201ENST00000396417 KIF21BO75037 1637 aa13.38□□□□□ -0.27
SEPT3-201ENST00000396417 RBM19Q9Y4C8 960 aaKnown RBP13.37□□□□□ -0.27
SEPT3-201ENST00000396417 URB2Q14146 1524 aaKnown RBP13.36□□□□□ -0.27
SEPT3-201ENST00000396417 UBE2Q2Q8WVN8 375 aa13.35□□□□□ -0.27
SEPT3-201ENST00000396417 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
SEPT3-201ENST00000396417 GOLGA3Q08378 1498 aa13.33□□□□□ -0.28
SEPT3-201ENST00000396417 POLA1P09884 1462 aaPredicted RBP13.33□□□□□ -0.28
SEPT3-201ENST00000396417 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
SEPT3-201ENST00000396417 FANCIQ9NVI1 1328 aa13.31□□□□□ -0.28
SEPT3-201ENST00000396417 ERCC6Q03468 1493 aa13.31□□□□□ -0.28
SEPT3-201ENST00000396417 WDR97A6NE52 1622 aa13.3□□□□□ -0.28
SEPT3-201ENST00000396417 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms