RNA–Protein interactions for RNA: ENST00000395375.3

ZNF273-201, Transcript of zinc finger protein 273, humanhuman

TSL 1 (best)

Gene ZNF273, Length 3,757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF273-201ENST00000395375 NISCHQ9Y2I1 1504 aa13.87□□□□□ -0.19
ZNF273-201ENST00000395375 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
ZNF273-201ENST00000395375 CCDC180Q9P1Z9 1646 aa11.86□□□□□ -0.51
ZNF273-201ENST00000395375 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
ZNF273-201ENST00000395375 ZCCHC6Q5VYS8 1495 aaKnown RBP11.61□□□□□ -0.55
ZNF273-201ENST00000395375 ABCC9O60706 1549 aa11.57□□□□□ -0.56
ZNF273-201ENST00000395375 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.58
ZNF273-201ENST00000395375 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
ZNF273-201ENST00000395375 SCRIBQ14160 1630 aa11.19□□□□□ -0.62
ZNF273-201ENST00000395375 NACADO15069 1562 aa11.17□□□□□ -0.62
ZNF273-201ENST00000395375 MYO15BQ96JP2 1530 aa11.12□□□□□ -0.63
ZNF273-201ENST00000395375 RB1CC1Q8TDY2 1594 aa11.11□□□□□ -0.63
ZNF273-201ENST00000395375 PABPN1Q86U42 306 aaKnown RBP eCLIP11.07□□□□□ -0.64
ZNF273-201ENST00000395375 CECR2Q9BXF3 1484 aa10.87□□□□□ -0.67
ZNF273-201ENST00000395375 RSF1Q96T23 1441 aaPredicted RBP10.86□□□□□ -0.67
ZNF273-201ENST00000395375 CHIC1Q5VXU3 224 aa10.78□□□□□ -0.68
ZNF273-201ENST00000395375 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
ZNF273-201ENST00000395375 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.69
ZNF273-201ENST00000395375 TRIM41Q8WV44 630 aa10.69□□□□□ -0.7
ZNF273-201ENST00000395375 UNC13AQ9UPW8 1703 aa10.67□□□□□ -0.7
ZNF273-201ENST00000395375 BICRAQ9NZM4 1560 aa10.66□□□□□ -0.7
ZNF273-201ENST00000395375 WIZO95785 1651 aa10.64□□□□□ -0.71
ZNF273-201ENST00000395375 FAM9AQ8IZU1 332 aaPredicted RBP10.63□□□□□ -0.71
ZNF273-201ENST00000395375 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
ZNF273-201ENST00000395375 SMARCA4P51532 1647 aa10.6□□□□□ -0.71
ZNF273-201ENST00000395375 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
ZNF273-201ENST00000395375 LOC105371045A0A1W2PR82 267 aa10.5□□□□□ -0.73
ZNF273-201ENST00000395375 TOP2AP11388 1531 aaKnown RBP10.5□□□□□ -0.73
ZNF273-201ENST00000395375 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
ZNF273-201ENST00000395375 CCDC88BA6NC98 1476 aa10.5□□□□□ -0.73
ZNF273-201ENST00000395375 SMARCA2P51531 1590 aa10.46□□□□□ -0.73
ZNF273-201ENST00000395375 EIF4G1Q04637 1599 aaKnown RBP10.44□□□□□ -0.74
ZNF273-201ENST00000395375 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
ZNF273-201ENST00000395375 PEG3Q9GZU2 1588 aa10.34□□□□□ -0.75
ZNF273-201ENST00000395375 ABCC8Q09428 1581 aa10.33□□□□□ -0.76
ZNF273-201ENST00000395375 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
ZNF273-201ENST00000395375 WRNQ14191 1432 aaPredicted RBP eCLIP10.3□□□□□ -0.76
ZNF273-201ENST00000395375 CC2D2AQ9P2K1 1620 aa10.28□□□□□ -0.76
ZNF273-201ENST00000395375 HMGXB3Q12766 1538 aa10.26□□□□□ -0.77
ZNF273-201ENST00000395375 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
ZNF273-201ENST00000395375 CSRNP3Q8WYN3 585 aa10.24□□□□□ -0.77
ZNF273-201ENST00000395375 CADPSQ9ULU8 1353 aa10.21□□□□□ -0.77
ZNF273-201ENST00000395375 SOGA1O94964 1423 aa10.21□□□□□ -0.77
ZNF273-201ENST00000395375 DNAJC5BQ9UF47 199 aa10.21□□□□□ -0.77
ZNF273-201ENST00000395375 PCGF6Q9BYE7 350 aa10.19□□□□□ -0.78
ZNF273-201ENST00000395375 CFTRP13569 1480 aa10.16□□□□□ -0.78
ZNF273-201ENST00000395375 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
ZNF273-201ENST00000395375 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
ZNF273-201ENST00000395375 RUSC2Q8N2Y8 1516 aa10.13□□□□□ -0.79
ZNF273-201ENST00000395375 EEA1Q15075 1411 aa10.11□□□□□ -0.79
ZNF273-201ENST00000395375 SYNJ1O43426 1573 aa10.11□□□□□ -0.79
ZNF273-201ENST00000395375 NESP48681 1621 aa10.11□□□□□ -0.79
ZNF273-201ENST00000395375 FANCD2Q9BXW9 1451 aa10.09□□□□□ -0.79
ZNF273-201ENST00000395375 APLP2Q06481 763 aa10.06□□□□□ -0.8
ZNF273-201ENST00000395375 PDS5BQ9NTI5 1447 aa10.06□□□□□ -0.8
ZNF273-201ENST00000395375 KIF27Q86VH2 1401 aa10.05□□□□□ -0.8
ZNF273-201ENST00000395375 CUX1P39880 1505 aa10.04□□□□□ -0.8
ZNF273-201ENST00000395375 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
ZNF273-201ENST00000395375 CUX2O14529 1486 aa10.03□□□□□ -0.8
ZNF273-201ENST00000395375 TRIM26Q12899 539 aaPredicted RBP10.03□□□□□ -0.8
ZNF273-201ENST00000395375 CEP164Q9UPV0 1460 aa10.02□□□□□ -0.8
ZNF273-201ENST00000395375 TOP2BQ02880 1626 aa10.02□□□□□ -0.81
ZNF273-201ENST00000395375 TNIKQ9UKE5 1360 aa10.01□□□□□ -0.81
ZNF273-201ENST00000395375 CEP162Q5TB80 1403 aa10.01□□□□□ -0.81
ZNF273-201ENST00000395375 FGD5Q6ZNL6 1462 aa9.99□□□□□ -0.81
ZNF273-201ENST00000395375 ATP1B4Q9UN42 357 aaPredicted RBP9.98□□□□□ -0.81
ZNF273-201ENST00000395375 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
ZNF273-201ENST00000395375 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
ZNF273-201ENST00000395375 RAD54L2Q9Y4B4 1467 aa9.96□□□□□ -0.82
ZNF273-201ENST00000395375 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
ZNF273-201ENST00000395375 CLIP1P30622 1438 aa9.95□□□□□ -0.82
ZNF273-201ENST00000395375 LAMC3Q9Y6N6 1575 aa9.95□□□□□ -0.82
ZNF273-201ENST00000395375 CARMIL1Q5VZK9 1371 aa9.94□□□□□ -0.82
ZNF273-201ENST00000395375 TOPBP1Q92547 1522 aa9.93□□□□□ -0.82
ZNF273-201ENST00000395375 P3H3Q8IVL6 736 aa9.93□□□□□ -0.82
ZNF273-201ENST00000395375 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
ZNF273-201ENST00000395375 IGF1RP08069 1367 aa9.92□□□□□ -0.82
ZNF273-201ENST00000395375 POLA1P09884 1462 aaPredicted RBP9.91□□□□□ -0.82
ZNF273-201ENST00000395375 FBLN2P98095 1184 aa9.91□□□□□ -0.82
ZNF273-201ENST00000395375 DNMBPQ6XZF7 1577 aa9.89□□□□□ -0.83
ZNF273-201ENST00000395375 URB2Q14146 1524 aaKnown RBP9.89□□□□□ -0.83
ZNF273-201ENST00000395375 PRXQ9BXM0 1461 aa9.86□□□□□ -0.83
ZNF273-201ENST00000395375 KIF21BO75037 1637 aa9.86□□□□□ -0.83
ZNF273-201ENST00000395375 MRC2Q9UBG0 1479 aa9.84□□□□□ -0.83
ZNF273-201ENST00000395375 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
ZNF273-201ENST00000395375 GAPVD1Q14C86 1478 aa9.82□□□□□ -0.84
ZNF273-201ENST00000395375 AQRO60306 1485 aaKnown RBP eCLIP9.82□□□□□ -0.847e-7■■■■■ 32.1
ZNF273-201ENST00000395375 ABCA10Q8WWZ4 1543 aa9.82□□□□□ -0.84
ZNF273-201ENST00000395375 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
ZNF273-201ENST00000395375 CHMP7Q8WUX9 453 aaPredicted RBP9.8□□□□□ -0.84
ZNF273-201ENST00000395375 ERICH3Q5RHP9 1530 aa9.8□□□□□ -0.84
ZNF273-201ENST00000395375 HRCP23327 699 aa9.8□□□□□ -0.84
ZNF273-201ENST00000395375 KIF21AQ7Z4S6 1674 aa9.8□□□□□ -0.84
ZNF273-201ENST00000395375 VPS8Q8N3P4 1428 aa9.8□□□□□ -0.84
ZNF273-201ENST00000395375 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
ZNF273-201ENST00000395375 ITGAEP38570 1179 aa9.77□□□□□ -0.85
ZNF273-201ENST00000395375 ARID3CA6NKF2 412 aa9.76□□□□□ -0.85
ZNF273-201ENST00000395375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.75□□□□□ -0.85
ZNF273-201ENST00000395375 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
ZNF273-201ENST00000395375 ZNF608Q9ULD9 1512 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms