RNA–Protein interactions for RNA: ENST00000393496.5

KALRN-205, Transcript of kalirin RhoGEF kinase, humanhuman

TSL 2

Gene KALRN, Length 3,190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KALRN-205ENST00000393496 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
KALRN-205ENST00000393496 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
KALRN-205ENST00000393496 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
KALRN-205ENST00000393496 ZCCHC6Q5VYS8 1495 aaKnown RBP20.42■□□□□ 0.86
KALRN-205ENST00000393496 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
KALRN-205ENST00000393496 SUPT5HO00267 1087 aaKnown RBP19.91■□□□□ 0.78
KALRN-205ENST00000393496 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
KALRN-205ENST00000393496 ABCC9O60706 1549 aa19.58■□□□□ 0.72
KALRN-205ENST00000393496 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
KALRN-205ENST00000393496 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
KALRN-205ENST00000393496 HRCP23327 699 aa19.25■□□□□ 0.67
KALRN-205ENST00000393496 PCGF6Q9BYE7 350 aa19.24■□□□□ 0.67
KALRN-205ENST00000393496 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
KALRN-205ENST00000393496 NACADO15069 1562 aa19.21■□□□□ 0.67
KALRN-205ENST00000393496 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
KALRN-205ENST00000393496 RSF1Q96T23 1441 aaPredicted RBP19.07■□□□□ 0.64
KALRN-205ENST00000393496 CECR2Q9BXF3 1484 aa19■□□□□ 0.63
KALRN-205ENST00000393496 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
KALRN-205ENST00000393496 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
KALRN-205ENST00000393496 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
KALRN-205ENST00000393496 WIZO95785 1651 aa18.76■□□□□ 0.59
KALRN-205ENST00000393496 LOC105371045A0A1W2PR82 267 aa18.72■□□□□ 0.59
KALRN-205ENST00000393496 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
KALRN-205ENST00000393496 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
KALRN-205ENST00000393496 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.57
KALRN-205ENST00000393496 SMARCA4P51532 1647 aa18.52■□□□□ 0.56
KALRN-205ENST00000393496 TRIM41Q8WV44 630 aa18.5■□□□□ 0.55
KALRN-205ENST00000393496 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
KALRN-205ENST00000393496 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
KALRN-205ENST00000393496 TOP2AP11388 1531 aaKnown RBP18.38■□□□□ 0.53
KALRN-205ENST00000393496 TRIM26Q12899 539 aaPredicted RBP18.36■□□□□ 0.53
KALRN-205ENST00000393496 CCDC88BA6NC98 1476 aa18.35■□□□□ 0.53
KALRN-205ENST00000393496 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.53
KALRN-205ENST00000393496 SMARCA2P51531 1590 aa18.31■□□□□ 0.52
KALRN-205ENST00000393496 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
KALRN-205ENST00000393496 ABCC8Q09428 1581 aa18.23■□□□□ 0.51
KALRN-205ENST00000393496 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
KALRN-205ENST00000393496 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
KALRN-205ENST00000393496 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
KALRN-205ENST00000393496 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
KALRN-205ENST00000393496 BAZ1BQ9UIG0 1483 aaKnown RBP18.04■□□□□ 0.48
KALRN-205ENST00000393496 SOGA1O94964 1423 aa17.99■□□□□ 0.47
KALRN-205ENST00000393496 RUSC2Q8N2Y8 1516 aa17.95■□□□□ 0.46
KALRN-205ENST00000393496 TTBK1Q5TCY1 1321 aaPredicted RBP17.91■□□□□ 0.46
KALRN-205ENST00000393496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
KALRN-205ENST00000393496 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.45
KALRN-205ENST00000393496 SYNJ1O43426 1573 aa17.87■□□□□ 0.45
KALRN-205ENST00000393496 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
KALRN-205ENST00000393496 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
KALRN-205ENST00000393496 NCAPD3P42695 1498 aa17.81■□□□□ 0.44
KALRN-205ENST00000393496 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
KALRN-205ENST00000393496 GTF3C3Q9Y5Q9 886 aa17.8■□□□□ 0.44
KALRN-205ENST00000393496 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
KALRN-205ENST00000393496 CSRNP3Q8WYN3 585 aa17.77■□□□□ 0.44
KALRN-205ENST00000393496 HMGXB3Q12766 1538 aa17.76■□□□□ 0.43
KALRN-205ENST00000393496 YTHDC1Q96MU7 727 aaKnown RBP17.69■□□□□ 0.42
KALRN-205ENST00000393496 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
KALRN-205ENST00000393496 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
KALRN-205ENST00000393496 DIEXFQ68CQ4 756 aaKnown RBP17.67■□□□□ 0.42
KALRN-205ENST00000393496 EEA1Q15075 1411 aa17.66■□□□□ 0.42
KALRN-205ENST00000393496 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
KALRN-205ENST00000393496 TNIKQ9UKE5 1360 aa17.63■□□□□ 0.41
KALRN-205ENST00000393496 TOP2BQ02880 1626 aa17.62■□□□□ 0.41
KALRN-205ENST00000393496 CC2D2AQ9P2K1 1620 aa17.61■□□□□ 0.41
KALRN-205ENST00000393496 CFTRP13569 1480 aa17.6■□□□□ 0.41
KALRN-205ENST00000393496 GOLGA3Q08378 1498 aa17.59■□□□□ 0.41
KALRN-205ENST00000393496 CUX1P39880 1505 aa17.58■□□□□ 0.4
KALRN-205ENST00000393496 BIVM-ERCC5R4GMW8 1640 aa17.56■□□□□ 0.4
KALRN-205ENST00000393496 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
KALRN-205ENST00000393496 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
KALRN-205ENST00000393496 CEP164Q9UPV0 1460 aa17.52■□□□□ 0.4
KALRN-205ENST00000393496 KIF21BO75037 1637 aa17.5■□□□□ 0.39
KALRN-205ENST00000393496 CADPSQ9ULU8 1353 aa17.46■□□□□ 0.39
KALRN-205ENST00000393496 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
KALRN-205ENST00000393496 CLIP1P30622 1438 aa17.4■□□□□ 0.38
KALRN-205ENST00000393496 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
KALRN-205ENST00000393496 NESP48681 1621 aa17.38■□□□□ 0.37
KALRN-205ENST00000393496 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
KALRN-205ENST00000393496 MYT1Q01538 1121 aa17.35■□□□□ 0.37
KALRN-205ENST00000393496 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
KALRN-205ENST00000393496 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
KALRN-205ENST00000393496 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
KALRN-205ENST00000393496 CUX2O14529 1486 aa17.29■□□□□ 0.36
KALRN-205ENST00000393496 VPS8Q8N3P4 1428 aa17.27■□□□□ 0.36
KALRN-205ENST00000393496 ERICH3Q5RHP9 1530 aa17.27■□□□□ 0.35
KALRN-205ENST00000393496 ZNF316A6NFI3 1004 aaPredicted RBP17.26■□□□□ 0.35
KALRN-205ENST00000393496 MIER1Q8N108 512 aa17.25■□□□□ 0.35
KALRN-205ENST00000393496 IGF1RP08069 1367 aa17.24■□□□□ 0.35
KALRN-205ENST00000393496 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
KALRN-205ENST00000393496 RAD54L2Q9Y4B4 1467 aa17.21■□□□□ 0.35
KALRN-205ENST00000393496 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
KALRN-205ENST00000393496 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
KALRN-205ENST00000393496 POLA1P09884 1462 aaPredicted RBP17.15■□□□□ 0.34
KALRN-205ENST00000393496 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
KALRN-205ENST00000393496 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
KALRN-205ENST00000393496 KANK4Q5T7N3 995 aaPredicted RBP17.12■□□□□ 0.33
KALRN-205ENST00000393496 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
KALRN-205ENST00000393496 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
KALRN-205ENST00000393496 APLP2Q06481 763 aa17.11■□□□□ 0.33
KALRN-205ENST00000393496 LAMC3Q9Y6N6 1575 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms