RNA–Protein interactions for RNA: ENST00000381570.7

RNF6-202, Transcript of ring finger protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-202ENST00000381570 NISCHQ9Y2I1 1504 aa12.97□□□□□ -0.33
RNF6-202ENST00000381570 AEBP2Q6ZN18 517 aaPredicted RBP11.64□□□□□ -0.55
RNF6-202ENST00000381570 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
RNF6-202ENST00000381570 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
RNF6-202ENST00000381570 SHROOM4Q9ULL8 1493 aa11.14□□□□□ -0.63
RNF6-202ENST00000381570 CCDC180Q9P1Z9 1646 aa11.06□□□□□ -0.64
RNF6-202ENST00000381570 ZCCHC6Q5VYS8 1495 aaKnown RBP10.88□□□□□ -0.67
RNF6-202ENST00000381570 SUPT5HO00267 1087 aaKnown RBP10.83□□□□□ -0.68
RNF6-202ENST00000381570 ABCC9O60706 1549 aa10.73□□□□□ -0.69
RNF6-202ENST00000381570 DCAF1Q9Y4B6 1507 aa10.52□□□□□ -0.72
RNF6-202ENST00000381570 SCRIBQ14160 1630 aa10.5□□□□□ -0.73
RNF6-202ENST00000381570 PHF23Q9BUL5 403 aaPredicted RBP10.36□□□□□ -0.75
RNF6-202ENST00000381570 NACADO15069 1562 aa10.35□□□□□ -0.75
RNF6-202ENST00000381570 MYO15BQ96JP2 1530 aa10.3□□□□□ -0.76
RNF6-202ENST00000381570 RB1CC1Q8TDY2 1594 aa10.29□□□□□ -0.76
RNF6-202ENST00000381570 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
RNF6-202ENST00000381570 CECR2Q9BXF3 1484 aa10.2□□□□□ -0.78
RNF6-202ENST00000381570 RSF1Q96T23 1441 aaPredicted RBP10.19□□□□□ -0.78
RNF6-202ENST00000381570 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
RNF6-202ENST00000381570 EHMT2Q96KQ7 1210 aa10.08□□□□□ -0.8
RNF6-202ENST00000381570 FAM9AQ8IZU1 332 aaPredicted RBP10.06□□□□□ -0.8
RNF6-202ENST00000381570 TRIM41Q8WV44 630 aa10.05□□□□□ -0.8
RNF6-202ENST00000381570 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
RNF6-202ENST00000381570 WIZO95785 1651 aa10.03□□□□□ -0.8
RNF6-202ENST00000381570 LOC105371045A0A1W2PR82 267 aa10.01□□□□□ -0.81
RNF6-202ENST00000381570 BAZ1AQ9NRL2 1556 aaPredicted RBP9.99□□□□□ -0.81
RNF6-202ENST00000381570 BICRAQ9NZM4 1560 aa9.94□□□□□ -0.82
RNF6-202ENST00000381570 SMARCA4P51532 1647 aa9.92□□□□□ -0.82
RNF6-202ENST00000381570 CCDC88BA6NC98 1476 aa9.84□□□□□ -0.83
RNF6-202ENST00000381570 TOP2AP11388 1531 aaKnown RBP9.83□□□□□ -0.84
RNF6-202ENST00000381570 BAZ1BQ9UIG0 1483 aaKnown RBP9.78□□□□□ -0.84
RNF6-202ENST00000381570 SMARCA2P51531 1590 aa9.77□□□□□ -0.84
RNF6-202ENST00000381570 PCGF6Q9BYE7 350 aa9.77□□□□□ -0.85
RNF6-202ENST00000381570 ABCC8Q09428 1581 aa9.77□□□□□ -0.85
RNF6-202ENST00000381570 ATAD2BQ9ULI0 1458 aa9.77□□□□□ -0.85
RNF6-202ENST00000381570 EIF4G1Q04637 1599 aaKnown RBP9.69□□□□□ -0.86
RNF6-202ENST00000381570 PPARGC1BQ86YN6 1023 aaKnown RBP9.69□□□□□ -0.86
RNF6-202ENST00000381570 SENP3Q9H4L4 574 aaPredicted RBP9.68□□□□□ -0.86
RNF6-202ENST00000381570 UBTFP17480 764 aaKnown RBP9.67□□□□□ -0.86
RNF6-202ENST00000381570 RANGAP1P46060 587 aaPredicted RBP9.67□□□□□ -0.86
RNF6-202ENST00000381570 TTBK1Q5TCY1 1321 aaPredicted RBP9.67□□□□□ -0.86
RNF6-202ENST00000381570 PEG3Q9GZU2 1588 aa9.65□□□□□ -0.87
RNF6-202ENST00000381570 WRNQ14191 1432 aaPredicted RBP eCLIP9.63□□□□□ -0.87
RNF6-202ENST00000381570 SOGA1O94964 1423 aa9.63□□□□□ -0.87
RNF6-202ENST00000381570 CSRNP3Q8WYN3 585 aa9.6□□□□□ -0.87
RNF6-202ENST00000381570 NCAPD3P42695 1498 aa9.59□□□□□ -0.87
RNF6-202ENST00000381570 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
RNF6-202ENST00000381570 PLPPR3Q6T4P5 718 aa9.59□□□□□ -0.87
RNF6-202ENST00000381570 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
RNF6-202ENST00000381570 CC2D2AQ9P2K1 1620 aa9.54□□□□□ -0.88
RNF6-202ENST00000381570 SYNJ1O43426 1573 aa9.53□□□□□ -0.88
RNF6-202ENST00000381570 HMGXB3Q12766 1538 aa9.53□□□□□ -0.88
RNF6-202ENST00000381570 DNAJC5BQ9UF47 199 aa9.49□□□□□ -0.89
RNF6-202ENST00000381570 EEA1Q15075 1411 aa9.46□□□□□ -0.89
RNF6-202ENST00000381570 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.9
RNF6-202ENST00000381570 CEP162Q5TB80 1403 aa9.46□□□□□ -0.9
RNF6-202ENST00000381570 HRCP23327 699 aa9.45□□□□□ -0.9
RNF6-202ENST00000381570 CFTRP13569 1480 aa9.44□□□□□ -0.9
RNF6-202ENST00000381570 GOLGA3Q08378 1498 aa9.44□□□□□ -0.9
RNF6-202ENST00000381570 NESP48681 1621 aa9.42□□□□□ -0.9
RNF6-202ENST00000381570 TNIKQ9UKE5 1360 aa9.42□□□□□ -0.9
RNF6-202ENST00000381570 APLP2Q06481 763 aa9.41□□□□□ -0.9
RNF6-202ENST00000381570 CUX1P39880 1505 aa9.41□□□□□ -0.9
RNF6-202ENST00000381570 CEP164Q9UPV0 1460 aa9.4□□□□□ -0.9
RNF6-202ENST00000381570 TOP2BQ02880 1626 aa9.4□□□□□ -0.9
RNF6-202ENST00000381570 RAPGEF2Q9Y4G8 1499 aa9.39□□□□□ -0.91
RNF6-202ENST00000381570 KIF27Q86VH2 1401 aa9.38□□□□□ -0.91
RNF6-202ENST00000381570 FANCD2Q9BXW9 1451 aa9.38□□□□□ -0.91
RNF6-202ENST00000381570 CUX2O14529 1486 aa9.37□□□□□ -0.91
RNF6-202ENST00000381570 CLIP1P30622 1438 aa9.37□□□□□ -0.91
RNF6-202ENST00000381570 ATP1B4Q9UN42 357 aaPredicted RBP9.35□□□□□ -0.91
RNF6-202ENST00000381570 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
RNF6-202ENST00000381570 FGD5Q6ZNL6 1462 aa9.33□□□□□ -0.92
RNF6-202ENST00000381570 P3H3Q8IVL6 736 aa9.33□□□□□ -0.92
RNF6-202ENST00000381570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.32□□□□□ -0.92
RNF6-202ENST00000381570 RAD54L2Q9Y4B4 1467 aa9.31□□□□□ -0.92
RNF6-202ENST00000381570 HNRNPUL2Q1KMD3 747 aaKnown RBP9.3□□□□□ -0.92
RNF6-202ENST00000381570 CCER1Q8TC90 406 aaPredicted RBP9.3□□□□□ -0.92
RNF6-202ENST00000381570 KIF21BO75037 1637 aa9.3□□□□□ -0.92
RNF6-202ENST00000381570 CARMIL1Q5VZK9 1371 aa9.27□□□□□ -0.93
RNF6-202ENST00000381570 TDRD9Q8NDG6 1382 aaKnown RBP9.27□□□□□ -0.93
RNF6-202ENST00000381570 PDS5BQ9NTI5 1447 aa9.27□□□□□ -0.93
RNF6-202ENST00000381570 IGF1RP08069 1367 aa9.26□□□□□ -0.93
RNF6-202ENST00000381570 PRDM2Q13029 1718 aa9.26□□□□□ -0.93
RNF6-202ENST00000381570 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
RNF6-202ENST00000381570 PRXQ9BXM0 1461 aa9.25□□□□□ -0.93
RNF6-202ENST00000381570 POLA1P09884 1462 aaPredicted RBP9.24□□□□□ -0.93
RNF6-202ENST00000381570 VPS8Q8N3P4 1428 aa9.23□□□□□ -0.93
RNF6-202ENST00000381570 ITGAEP38570 1179 aa9.23□□□□□ -0.93
RNF6-202ENST00000381570 LAMC3Q9Y6N6 1575 aa9.22□□□□□ -0.93
RNF6-202ENST00000381570 DNMBPQ6XZF7 1577 aa9.22□□□□□ -0.93
RNF6-202ENST00000381570 URB2Q14146 1524 aaKnown RBP9.22□□□□□ -0.93
RNF6-202ENST00000381570 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.94
RNF6-202ENST00000381570 ERICH3Q5RHP9 1530 aa9.2□□□□□ -0.94
RNF6-202ENST00000381570 ERCC6Q03468 1493 aa9.19□□□□□ -0.94
RNF6-202ENST00000381570 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
RNF6-202ENST00000381570 KIF21AQ7Z4S6 1674 aa9.18□□□□□ -0.94
RNF6-202ENST00000381570 ARAP1Q96P48 1450 aa9.17□□□□□ -0.94
RNF6-202ENST00000381570 FBLN2P98095 1184 aa9.17□□□□□ -0.94
RNF6-202ENST00000381570 ARID3CA6NKF2 412 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms