RNA–Protein interactions for RNA: ENST00000378764.6

OPTN-206, Transcript of optineurin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OPTN, Length 2,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-206ENST00000378764 NISCHQ9Y2I1 1504 aa22.91■■□□□ 1.26
OPTN-206ENST00000378764 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
OPTN-206ENST00000378764 ABCC9O60706 1549 aa19.59■□□□□ 0.73
OPTN-206ENST00000378764 CHIC1Q5VXU3 224 aa19.44■□□□□ 0.7
OPTN-206ENST00000378764 SHROOM4Q9ULL8 1493 aa19.38■□□□□ 0.69
OPTN-206ENST00000378764 ZCCHC6Q5VYS8 1495 aaKnown RBP19.32■□□□□ 0.68
OPTN-206ENST00000378764 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.65
OPTN-206ENST00000378764 NACADO15069 1562 aa19.1■□□□□ 0.65
OPTN-206ENST00000378764 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
OPTN-206ENST00000378764 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
OPTN-206ENST00000378764 SLC24A1O60721 1099 aa19.05■□□□□ 0.64
OPTN-206ENST00000378764 SUPT5HO00267 1087 aaKnown RBP18.85■□□□□ 0.61
OPTN-206ENST00000378764 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
OPTN-206ENST00000378764 AEBP2Q6ZN18 517 aaPredicted RBP18.56■□□□□ 0.56
OPTN-206ENST00000378764 UNC13AQ9UPW8 1703 aa18.55■□□□□ 0.56
OPTN-206ENST00000378764 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
OPTN-206ENST00000378764 BICRAQ9NZM4 1560 aa18.4■□□□□ 0.54
OPTN-206ENST00000378764 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
OPTN-206ENST00000378764 DNAJC5BQ9UF47 199 aa18.09■□□□□ 0.49
OPTN-206ENST00000378764 RSF1Q96T23 1441 aaPredicted RBP18.04■□□□□ 0.48
OPTN-206ENST00000378764 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.487e-9■□□□□ 10
OPTN-206ENST00000378764 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
OPTN-206ENST00000378764 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
OPTN-206ENST00000378764 CECR2Q9BXF3 1484 aa17.93■□□□□ 0.46
OPTN-206ENST00000378764 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
OPTN-206ENST00000378764 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
OPTN-206ENST00000378764 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
OPTN-206ENST00000378764 WIZO95785 1651 aa17.73■□□□□ 0.43
OPTN-206ENST00000378764 LOC105371045A0A1W2PR82 267 aa17.69■□□□□ 0.42
OPTN-206ENST00000378764 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
OPTN-206ENST00000378764 RTN4Q9NQC3 1192 aaKnown RBP17.59■□□□□ 0.41
OPTN-206ENST00000378764 TRIM41Q8WV44 630 aa17.56■□□□□ 0.4
OPTN-206ENST00000378764 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
OPTN-206ENST00000378764 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
OPTN-206ENST00000378764 HMGXB3Q12766 1538 aa17.5■□□□□ 0.39
OPTN-206ENST00000378764 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
OPTN-206ENST00000378764 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
OPTN-206ENST00000378764 FAM9AQ8IZU1 332 aaPredicted RBP17.44■□□□□ 0.38
OPTN-206ENST00000378764 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
OPTN-206ENST00000378764 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
OPTN-206ENST00000378764 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
OPTN-206ENST00000378764 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
OPTN-206ENST00000378764 CUX2O14529 1486 aa17.33■□□□□ 0.36
OPTN-206ENST00000378764 ABCC8Q09428 1581 aa17.23■□□□□ 0.35
OPTN-206ENST00000378764 KCNA4P22459 653 aa17.2■□□□□ 0.34
OPTN-206ENST00000378764 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
OPTN-206ENST00000378764 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
OPTN-206ENST00000378764 BAZ1BQ9UIG0 1483 aaKnown RBP17.18■□□□□ 0.34
OPTN-206ENST00000378764 HRCP23327 699 aa17.15■□□□□ 0.34
OPTN-206ENST00000378764 TRIM26Q12899 539 aaPredicted RBP17.06■□□□□ 0.32
OPTN-206ENST00000378764 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
OPTN-206ENST00000378764 SOGA1O94964 1423 aa17.02■□□□□ 0.31
OPTN-206ENST00000378764 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
OPTN-206ENST00000378764 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
OPTN-206ENST00000378764 RUSC2Q8N2Y8 1516 aa16.97■□□□□ 0.31
OPTN-206ENST00000378764 WRNQ14191 1432 aaPredicted RBP eCLIP16.93■□□□□ 0.3
OPTN-206ENST00000378764 PPARGC1BQ86YN6 1023 aaKnown RBP16.92■□□□□ 0.3
OPTN-206ENST00000378764 NCBP3Q53F19 620 aaKnown RBP16.91■□□□□ 0.3
OPTN-206ENST00000378764 SYNJ1O43426 1573 aa16.89■□□□□ 0.29
OPTN-206ENST00000378764 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
OPTN-206ENST00000378764 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
OPTN-206ENST00000378764 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
OPTN-206ENST00000378764 PRKCSHP14314 528 aaPredicted RBP16.84■□□□□ 0.29
OPTN-206ENST00000378764 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
OPTN-206ENST00000378764 WDR62O43379 1518 aa16.83■□□□□ 0.29
OPTN-206ENST00000378764 KIF21AQ7Z4S6 1674 aa16.83■□□□□ 0.28
OPTN-206ENST00000378764 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
OPTN-206ENST00000378764 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
OPTN-206ENST00000378764 NESP48681 1621 aa16.8■□□□□ 0.28
OPTN-206ENST00000378764 EEA1Q15075 1411 aa16.8■□□□□ 0.28
OPTN-206ENST00000378764 CEP162Q5TB80 1403 aa16.77■□□□□ 0.27
OPTN-206ENST00000378764 UBTFP17480 764 aaKnown RBP16.76■□□□□ 0.27
OPTN-206ENST00000378764 TNIKQ9UKE5 1360 aa16.75■□□□□ 0.27
OPTN-206ENST00000378764 CFTRP13569 1480 aa16.74■□□□□ 0.27
OPTN-206ENST00000378764 CEP164Q9UPV0 1460 aa16.71■□□□□ 0.27
OPTN-206ENST00000378764 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
OPTN-206ENST00000378764 TOP2BQ02880 1626 aa16.69■□□□□ 0.26
OPTN-206ENST00000378764 TTBK1Q5TCY1 1321 aaPredicted RBP16.68■□□□□ 0.26
OPTN-206ENST00000378764 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
OPTN-206ENST00000378764 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
OPTN-206ENST00000378764 KIF21BO75037 1637 aa16.62■□□□□ 0.25
OPTN-206ENST00000378764 CUX1P39880 1505 aa16.61■□□□□ 0.25
OPTN-206ENST00000378764 RAPGEF2Q9Y4G8 1499 aa16.6■□□□□ 0.25
OPTN-206ENST00000378764 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
OPTN-206ENST00000378764 WDR97A6NE52 1622 aa16.53■□□□□ 0.24
OPTN-206ENST00000378764 CLIP1P30622 1438 aa16.51■□□□□ 0.23
OPTN-206ENST00000378764 ZEB1P37275 1124 aaPredicted RBP16.5■□□□□ 0.23
OPTN-206ENST00000378764 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
OPTN-206ENST00000378764 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
OPTN-206ENST00000378764 PRXQ9BXM0 1461 aa16.45■□□□□ 0.22
OPTN-206ENST00000378764 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
OPTN-206ENST00000378764 DNMBPQ6XZF7 1577 aa16.43■□□□□ 0.22
OPTN-206ENST00000378764 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
OPTN-206ENST00000378764 VPS8Q8N3P4 1428 aa16.4■□□□□ 0.22
OPTN-206ENST00000378764 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
OPTN-206ENST00000378764 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
OPTN-206ENST00000378764 TOPBP1Q92547 1522 aa16.35■□□□□ 0.21
OPTN-206ENST00000378764 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
OPTN-206ENST00000378764 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
OPTN-206ENST00000378764 IGF1RP08069 1367 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms