RNA–Protein interactions for RNA: ENST00000377447.7

CBWD1-204, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CBWD1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-204ENST00000377447 NISCHQ9Y2I1 1504 aa21.16■□□□□ 0.98
CBWD1-204ENST00000377447 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
CBWD1-204ENST00000377447 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
CBWD1-204ENST00000377447 ABCC9O60706 1549 aa17.84■□□□□ 0.45
CBWD1-204ENST00000377447 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.44
CBWD1-204ENST00000377447 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
CBWD1-204ENST00000377447 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
CBWD1-204ENST00000377447 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
CBWD1-204ENST00000377447 NACADO15069 1562 aa17.22■□□□□ 0.35
CBWD1-204ENST00000377447 MYO15BQ96JP2 1530 aa17.17■□□□□ 0.34
CBWD1-204ENST00000377447 RB1CC1Q8TDY2 1594 aa17.17■□□□□ 0.34
CBWD1-204ENST00000377447 SCRIBQ14160 1630 aa16.98■□□□□ 0.31
CBWD1-204ENST00000377447 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
CBWD1-204ENST00000377447 CHIC1Q5VXU3 224 aa16.81■□□□□ 0.28
CBWD1-204ENST00000377447 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
CBWD1-204ENST00000377447 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
CBWD1-204ENST00000377447 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
CBWD1-204ENST00000377447 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
CBWD1-204ENST00000377447 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
CBWD1-204ENST00000377447 WIZO95785 1651 aa16.36■□□□□ 0.21
CBWD1-204ENST00000377447 LOC105371045A0A1W2PR82 267 aa16.36■□□□□ 0.21
CBWD1-204ENST00000377447 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
CBWD1-204ENST00000377447 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
CBWD1-204ENST00000377447 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
CBWD1-204ENST00000377447 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
CBWD1-204ENST00000377447 SMARCA4P51532 1647 aa16.19■□□□□ 0.18
CBWD1-204ENST00000377447 EHMT2Q96KQ7 1210 aa16.12■□□□□ 0.17
CBWD1-204ENST00000377447 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
CBWD1-204ENST00000377447 PCGF6Q9BYE7 350 aa16.1■□□□□ 0.17
CBWD1-204ENST00000377447 CC2D2AQ9P2K1 1620 aa16.07■□□□□ 0.16
CBWD1-204ENST00000377447 TOP2AP11388 1531 aaKnown RBP16.06■□□□□ 0.16
CBWD1-204ENST00000377447 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
CBWD1-204ENST00000377447 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.15
CBWD1-204ENST00000377447 SMARCA2P51531 1590 aa15.97■□□□□ 0.15
CBWD1-204ENST00000377447 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
CBWD1-204ENST00000377447 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
CBWD1-204ENST00000377447 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
CBWD1-204ENST00000377447 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
CBWD1-204ENST00000377447 HRCP23327 699 aa15.84■□□□□ 0.13
CBWD1-204ENST00000377447 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
CBWD1-204ENST00000377447 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
CBWD1-204ENST00000377447 SOGA1O94964 1423 aa15.71■□□□□ 0.11
CBWD1-204ENST00000377447 PPARGC1BQ86YN6 1023 aaKnown RBP15.68■□□□□ 0.1
CBWD1-204ENST00000377447 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
CBWD1-204ENST00000377447 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
CBWD1-204ENST00000377447 CSRNP3Q8WYN3 585 aa15.62■□□□□ 0.09
CBWD1-204ENST00000377447 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
CBWD1-204ENST00000377447 SYNJ1O43426 1573 aa15.59■□□□□ 0.09
CBWD1-204ENST00000377447 NESP48681 1621 aa15.56■□□□□ 0.08
CBWD1-204ENST00000377447 EEA1Q15075 1411 aa15.55■□□□□ 0.08
CBWD1-204ENST00000377447 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
CBWD1-204ENST00000377447 TTBK1Q5TCY1 1321 aaPredicted RBP15.52■□□□□ 0.07
CBWD1-204ENST00000377447 CEP162Q5TB80 1403 aa15.52■□□□□ 0.07
CBWD1-204ENST00000377447 CFTRP13569 1480 aa15.5■□□□□ 0.07
CBWD1-204ENST00000377447 TNIKQ9UKE5 1360 aa15.48■□□□□ 0.07
CBWD1-204ENST00000377447 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
CBWD1-204ENST00000377447 LAMC3Q9Y6N6 1575 aa15.41■□□□□ 0.06
CBWD1-204ENST00000377447 RANGAP1P46060 587 aaPredicted RBP15.41■□□□□ 0.06
CBWD1-204ENST00000377447 TOP2BQ02880 1626 aa15.41■□□□□ 0.06
CBWD1-204ENST00000377447 CEP164Q9UPV0 1460 aa15.4■□□□□ 0.06
CBWD1-204ENST00000377447 FANCD2Q9BXW9 1451 aa15.36■□□□□ 0.05
CBWD1-204ENST00000377447 PDS5BQ9NTI5 1447 aa15.36■□□□□ 0.05
CBWD1-204ENST00000377447 RAPGEF2Q9Y4G8 1499 aa15.34■□□□□ 0.05
CBWD1-204ENST00000377447 KIF21BO75037 1637 aa15.34■□□□□ 0.05
CBWD1-204ENST00000377447 BIVM-ERCC5R4GMW8 1640 aa15.34■□□□□ 0.05
CBWD1-204ENST00000377447 CUX1P39880 1505 aa15.32■□□□□ 0.04
CBWD1-204ENST00000377447 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
CBWD1-204ENST00000377447 ERCC6Q03468 1493 aa15.3■□□□□ 0.04
CBWD1-204ENST00000377447 CLIP1P30622 1438 aa15.29■□□□□ 0.04
CBWD1-204ENST00000377447 PRDM2Q13029 1718 aa15.29■□□□□ 0.04
CBWD1-204ENST00000377447 KIF21AQ7Z4S6 1674 aa15.29■□□□□ 0.04
CBWD1-204ENST00000377447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
CBWD1-204ENST00000377447 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
CBWD1-204ENST00000377447 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
CBWD1-204ENST00000377447 APLP2Q06481 763 aa15.2■□□□□ 0.02
CBWD1-204ENST00000377447 URB2Q14146 1524 aaKnown RBP15.19■□□□□ 0.02
CBWD1-204ENST00000377447 PRXQ9BXM0 1461 aa15.18■□□□□ 0.02
CBWD1-204ENST00000377447 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
CBWD1-204ENST00000377447 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
CBWD1-204ENST00000377447 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
CBWD1-204ENST00000377447 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
CBWD1-204ENST00000377447 CUX2O14529 1486 aa15.14■□□□□ 0.01
CBWD1-204ENST00000377447 FGD5Q6ZNL6 1462 aa15.12■□□□□ 0.01
CBWD1-204ENST00000377447 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
CBWD1-204ENST00000377447 THOC2Q8NI27 1593 aaKnown RBP15.1■□□□□ 0.01
CBWD1-204ENST00000377447 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
CBWD1-204ENST00000377447 WDR62O43379 1518 aa15.07■□□□□ 0
CBWD1-204ENST00000377447 POLA1P09884 1462 aaPredicted RBP15.06■□□□□ 0
CBWD1-204ENST00000377447 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
CBWD1-204ENST00000377447 IGF1RP08069 1367 aa15.06■□□□□ 0
CBWD1-204ENST00000377447 ARAP1Q96P48 1450 aa15.03■□□□□ -0
CBWD1-204ENST00000377447 CARMIL1Q5VZK9 1371 aa15.02□□□□□ -0.01
CBWD1-204ENST00000377447 KANK4Q5T7N3 995 aaPredicted RBP14.98□□□□□ -0.01
CBWD1-204ENST00000377447 TDRD9Q8NDG6 1382 aaKnown RBP14.97□□□□□ -0.01
CBWD1-204ENST00000377447 ARHGAP35Q9NRY4 1499 aa14.97□□□□□ -0.01
CBWD1-204ENST00000377447 ZNF608Q9ULD9 1512 aaPredicted RBP14.93□□□□□ -0.02
CBWD1-204ENST00000377447 P3H3Q8IVL6 736 aa14.93□□□□□ -0.02
CBWD1-204ENST00000377447 TARBP1Q13395 1621 aaKnown RBP14.92□□□□□ -0.02
CBWD1-204ENST00000377447 IFT140Q96RY7 1462 aa14.92□□□□□ -0.02
CBWD1-204ENST00000377447 AQRO60306 1485 aaKnown RBP eCLIP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms