RNA–Protein interactions for RNA: ENST00000373535.6

FGD2-202, Transcript of FYVE, RhoGEF and PH domain containing 2, humanhuman

TSL 5

Gene FGD2, Length 2,197 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD2-202ENST00000373535 NISCHQ9Y2I1 1504 aa37.59■■■■□ 3.61
FGD2-202ENST00000373535 CCDC180Q9P1Z9 1646 aa32.19■■■□□ 2.74
FGD2-202ENST00000373535 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
FGD2-202ENST00000373535 SHROOM4Q9ULL8 1493 aa31.55■■■□□ 2.64
FGD2-202ENST00000373535 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
FGD2-202ENST00000373535 SUPT5HO00267 1087 aaKnown RBP30.91■■■□□ 2.54
FGD2-202ENST00000373535 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
FGD2-202ENST00000373535 ABCC9O60706 1549 aa30.47■■■□□ 2.47
FGD2-202ENST00000373535 MYO15BQ96JP2 1530 aa30.24■■■□□ 2.43
FGD2-202ENST00000373535 CHIC1Q5VXU3 224 aa30.13■■■□□ 2.41
FGD2-202ENST00000373535 SCRIBQ14160 1630 aa29.86■■■□□ 2.37
FGD2-202ENST00000373535 NACADO15069 1562 aa29.77■■■□□ 2.36
FGD2-202ENST00000373535 RSF1Q96T23 1441 aaPredicted RBP29.62■■■□□ 2.33
FGD2-202ENST00000373535 RB1CC1Q8TDY2 1594 aa29.51■■■□□ 2.31
FGD2-202ENST00000373535 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
FGD2-202ENST00000373535 MROH2BQ7Z745 1585 aa29.12■■■□□ 2.25
FGD2-202ENST00000373535 LOC105371045A0A1W2PR82 267 aa29.08■■■□□ 2.25
FGD2-202ENST00000373535 TRIM41Q8WV44 630 aa28.95■■■□□ 2.22
FGD2-202ENST00000373535 WIZO95785 1651 aa28.94■■■□□ 2.22
FGD2-202ENST00000373535 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
FGD2-202ENST00000373535 HRCP23327 699 aa28.89■■■□□ 2.22
FGD2-202ENST00000373535 PCGF6Q9BYE7 350 aa28.86■■■□□ 2.21
FGD2-202ENST00000373535 UNC13AQ9UPW8 1703 aa28.84■■■□□ 2.21
FGD2-202ENST00000373535 PABPN1Q86U42 306 aaKnown RBP eCLIP28.72■■■□□ 2.19
FGD2-202ENST00000373535 SMARCA4P51532 1647 aa28.65■■■□□ 2.18
FGD2-202ENST00000373535 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
FGD2-202ENST00000373535 TOP2AP11388 1531 aaKnown RBP28.61■■■□□ 2.17
FGD2-202ENST00000373535 EIF4G1Q04637 1599 aaKnown RBP28.57■■■□□ 2.16
FGD2-202ENST00000373535 TRIM26Q12899 539 aaPredicted RBP28.56■■■□□ 2.16
FGD2-202ENST00000373535 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
FGD2-202ENST00000373535 CCDC88BA6NC98 1476 aa28.41■■■□□ 2.14
FGD2-202ENST00000373535 SMARCA2P51531 1590 aa28.4■■■□□ 2.14
FGD2-202ENST00000373535 PEG3Q9GZU2 1588 aa28.23■■■□□ 2.11
FGD2-202ENST00000373535 ABCC8Q09428 1581 aa28.16■■■□□ 2.1
FGD2-202ENST00000373535 EHMT2Q96KQ7 1210 aa28.1■■■□□ 2.09
FGD2-202ENST00000373535 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
FGD2-202ENST00000373535 ZEB1P37275 1124 aaPredicted RBP27.97■■■□□ 2.07
FGD2-202ENST00000373535 EEA1Q15075 1411 aa27.97■■■□□ 2.07
FGD2-202ENST00000373535 ATAD2BQ9ULI0 1458 aa27.95■■■□□ 2.06
FGD2-202ENST00000373535 SOGA1O94964 1423 aa27.88■■■□□ 2.05
FGD2-202ENST00000373535 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
FGD2-202ENST00000373535 WRNQ14191 1432 aaPredicted RBP eCLIP27.83■■■□□ 2.05
FGD2-202ENST00000373535 CSRNP3Q8WYN3 585 aa27.8■■■□□ 2.04
FGD2-202ENST00000373535 TNIKQ9UKE5 1360 aa27.8■■■□□ 2.04
FGD2-202ENST00000373535 CEP162Q5TB80 1403 aa27.73■■■□□ 2.03
FGD2-202ENST00000373535 RUSC2Q8N2Y8 1516 aa27.72■■■□□ 2.03
FGD2-202ENST00000373535 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
FGD2-202ENST00000373535 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
FGD2-202ENST00000373535 UBTFP17480 764 aaKnown RBP27.56■■■□□ 2
FGD2-202ENST00000373535 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
FGD2-202ENST00000373535 KIF21BO75037 1637 aa27.53■■■□□ 2
FGD2-202ENST00000373535 NCAPD3P42695 1498 aa27.52■■■□□ 2
FGD2-202ENST00000373535 HMGXB3Q12766 1538 aa27.51■■■□□ 2
FGD2-202ENST00000373535 CC2D2AQ9P2K1 1620 aa27.51■■■□□ 2
FGD2-202ENST00000373535 TOP2BQ02880 1626 aa27.45■■□□□ 1.98
FGD2-202ENST00000373535 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
FGD2-202ENST00000373535 DNAJC5BQ9UF47 199 aa27.33■■□□□ 1.97
FGD2-202ENST00000373535 CLIP1P30622 1438 aa27.27■■□□□ 1.96
FGD2-202ENST00000373535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.26■■□□□ 1.96
FGD2-202ENST00000373535 CCER1Q8TC90 406 aaPredicted RBP27.26■■□□□ 1.96
FGD2-202ENST00000373535 RAPGEF2Q9Y4G8 1499 aa27.24■■□□□ 1.95
FGD2-202ENST00000373535 CFTRP13569 1480 aa27.21■■□□□ 1.95
FGD2-202ENST00000373535 TTBK1Q5TCY1 1321 aaPredicted RBP27.18■■□□□ 1.94
FGD2-202ENST00000373535 VPS8Q8N3P4 1428 aa27.17■■□□□ 1.94
FGD2-202ENST00000373535 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
FGD2-202ENST00000373535 CUX1P39880 1505 aa27.14■■□□□ 1.94
FGD2-202ENST00000373535 PRXQ9BXM0 1461 aa27.11■■□□□ 1.93
FGD2-202ENST00000373535 PRDM2Q13029 1718 aa27.06■■□□□ 1.92
FGD2-202ENST00000373535 KIF27Q86VH2 1401 aa27.03■■□□□ 1.92
FGD2-202ENST00000373535 APLP2Q06481 763 aa26.99■■□□□ 1.91
FGD2-202ENST00000373535 CADPSQ9ULU8 1353 aa26.91■■□□□ 1.9
FGD2-202ENST00000373535 ARAP1Q96P48 1450 aa26.86■■□□□ 1.89
FGD2-202ENST00000373535 RANGAP1P46060 587 aaPredicted RBP26.84■■□□□ 1.89
FGD2-202ENST00000373535 HNRNPUL2Q1KMD3 747 aaKnown RBP26.77■■□□□ 1.88
FGD2-202ENST00000373535 CUX2O14529 1486 aa26.73■■□□□ 1.87
FGD2-202ENST00000373535 IGF1RP08069 1367 aa26.72■■□□□ 1.87
FGD2-202ENST00000373535 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
FGD2-202ENST00000373535 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
FGD2-202ENST00000373535 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
FGD2-202ENST00000373535 FANCD2Q9BXW9 1451 aa26.61■■□□□ 1.85
FGD2-202ENST00000373535 NESP48681 1621 aa26.61■■□□□ 1.85
FGD2-202ENST00000373535 CARMIL1Q5VZK9 1371 aa26.6■■□□□ 1.85
FGD2-202ENST00000373535 ZNF316A6NFI3 1004 aaPredicted RBP26.58■■□□□ 1.85
FGD2-202ENST00000373535 KANK4Q5T7N3 995 aaPredicted RBP26.58■■□□□ 1.85
FGD2-202ENST00000373535 RRBP1Q9P2E9 1410 aaKnown RBP26.55■■□□□ 1.84
FGD2-202ENST00000373535 DNMBPQ6XZF7 1577 aa26.53■■□□□ 1.84
FGD2-202ENST00000373535 LAMC3Q9Y6N6 1575 aa26.51■■□□□ 1.83
FGD2-202ENST00000373535 CLSPNQ9HAW4 1339 aa26.5■■□□□ 1.83
FGD2-202ENST00000373535 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
FGD2-202ENST00000373535 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.82
FGD2-202ENST00000373535 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
FGD2-202ENST00000373535 POLA1P09884 1462 aaPredicted RBP26.4■■□□□ 1.82
FGD2-202ENST00000373535 CCNB3Q8WWL7 1395 aa26.39■■□□□ 1.82
FGD2-202ENST00000373535 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
FGD2-202ENST00000373535 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
FGD2-202ENST00000373535 DHX57Q6P158 1386 aaKnown RBP26.37■■□□□ 1.81
FGD2-202ENST00000373535 SCAF1Q9H7N4 1312 aaKnown RBP26.37■■□□□ 1.81
FGD2-202ENST00000373535 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
FGD2-202ENST00000373535 FHAD1B1AJZ9 1412 aa26.35■■□□□ 1.81
FGD2-202ENST00000373535 CUL7Q14999 1698 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms