RNA–Protein interactions for RNA: ENST00000372520.1

ZSWIM1-201, Transcript of zinc finger SWIM-type containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM1, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1-201ENST00000372520 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
ZSWIM1-201ENST00000372520 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
ZSWIM1-201ENST00000372520 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
ZSWIM1-201ENST00000372520 CCDC180Q9P1Z9 1646 aa21.36■■□□□ 1.01
ZSWIM1-201ENST00000372520 PHF23Q9BUL5 403 aaPredicted RBP20.75■□□□□ 0.91
ZSWIM1-201ENST00000372520 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
ZSWIM1-201ENST00000372520 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
ZSWIM1-201ENST00000372520 ABCC9O60706 1549 aa20.49■□□□□ 0.87
ZSWIM1-201ENST00000372520 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
ZSWIM1-201ENST00000372520 SHROOM4Q9ULL8 1493 aa20.14■□□□□ 0.81
ZSWIM1-201ENST00000372520 MYO15BQ96JP2 1530 aa20■□□□□ 0.79
ZSWIM1-201ENST00000372520 NACADO15069 1562 aa19.96■□□□□ 0.79
ZSWIM1-201ENST00000372520 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
ZSWIM1-201ENST00000372520 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
ZSWIM1-201ENST00000372520 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
ZSWIM1-201ENST00000372520 UNC13AQ9UPW8 1703 aa19.47■□□□□ 0.71
ZSWIM1-201ENST00000372520 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
ZSWIM1-201ENST00000372520 SUPT5HO00267 1087 aaKnown RBP19.33■□□□□ 0.69
ZSWIM1-201ENST00000372520 BICRAQ9NZM4 1560 aa19.29■□□□□ 0.68
ZSWIM1-201ENST00000372520 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
ZSWIM1-201ENST00000372520 PLPPR3Q6T4P5 718 aa19.08■□□□□ 0.65
ZSWIM1-201ENST00000372520 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
ZSWIM1-201ENST00000372520 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.64
ZSWIM1-201ENST00000372520 BAZ1AQ9NRL2 1556 aaPredicted RBP18.94■□□□□ 0.62
ZSWIM1-201ENST00000372520 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
ZSWIM1-201ENST00000372520 WIZO95785 1651 aa18.86■□□□□ 0.61
ZSWIM1-201ENST00000372520 EIF4G1Q04637 1599 aaKnown RBP18.71■□□□□ 0.59
ZSWIM1-201ENST00000372520 ATAD2BQ9ULI0 1458 aa18.64■□□□□ 0.57
ZSWIM1-201ENST00000372520 PEG3Q9GZU2 1588 aa18.62■□□□□ 0.57
ZSWIM1-201ENST00000372520 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
ZSWIM1-201ENST00000372520 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
ZSWIM1-201ENST00000372520 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.55
ZSWIM1-201ENST00000372520 CC2D2AQ9P2K1 1620 aa18.48■□□□□ 0.55
ZSWIM1-201ENST00000372520 CCDC88BA6NC98 1476 aa18.47■□□□□ 0.55
ZSWIM1-201ENST00000372520 NCAPD3P42695 1498 aa18.47■□□□□ 0.55
ZSWIM1-201ENST00000372520 HMGXB3Q12766 1538 aa18.38■□□□□ 0.53
ZSWIM1-201ENST00000372520 FOXD1Q16676 465 aa18.35■□□□□ 0.53
ZSWIM1-201ENST00000372520 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
ZSWIM1-201ENST00000372520 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
ZSWIM1-201ENST00000372520 ADRA2BP18089 450 aa18.18■□□□□ 0.5
ZSWIM1-201ENST00000372520 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
ZSWIM1-201ENST00000372520 ABCC8Q09428 1581 aa18.08■□□□□ 0.48
ZSWIM1-201ENST00000372520 CFTRP13569 1480 aa18.04■□□□□ 0.48
ZSWIM1-201ENST00000372520 CADPSQ9ULU8 1353 aa18.02■□□□□ 0.48
ZSWIM1-201ENST00000372520 NESP48681 1621 aa17.97■□□□□ 0.47
ZSWIM1-201ENST00000372520 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
ZSWIM1-201ENST00000372520 FAM9AQ8IZU1 332 aaPredicted RBP17.88■□□□□ 0.45
ZSWIM1-201ENST00000372520 SYNJ1O43426 1573 aa17.86■□□□□ 0.45
ZSWIM1-201ENST00000372520 PRDM2Q13029 1718 aa17.85■□□□□ 0.45
ZSWIM1-201ENST00000372520 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
ZSWIM1-201ENST00000372520 LAMC3Q9Y6N6 1575 aa17.82■□□□□ 0.44
ZSWIM1-201ENST00000372520 CUX1P39880 1505 aa17.78■□□□□ 0.44
ZSWIM1-201ENST00000372520 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
ZSWIM1-201ENST00000372520 TOP2BQ02880 1626 aa17.75■□□□□ 0.43
ZSWIM1-201ENST00000372520 SOGA1O94964 1423 aa17.74■□□□□ 0.43
ZSWIM1-201ENST00000372520 PDS5BQ9NTI5 1447 aa17.73■□□□□ 0.43
ZSWIM1-201ENST00000372520 EHMT2Q96KQ7 1210 aa17.71■□□□□ 0.43
ZSWIM1-201ENST00000372520 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
ZSWIM1-201ENST00000372520 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
ZSWIM1-201ENST00000372520 RUSC2Q8N2Y8 1516 aa17.7■□□□□ 0.42
ZSWIM1-201ENST00000372520 KIF21AQ7Z4S6 1674 aa17.67■□□□□ 0.42
ZSWIM1-201ENST00000372520 HRCP23327 699 aa17.67■□□□□ 0.42
ZSWIM1-201ENST00000372520 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
ZSWIM1-201ENST00000372520 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
ZSWIM1-201ENST00000372520 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
ZSWIM1-201ENST00000372520 DNMBPQ6XZF7 1577 aa17.59■□□□□ 0.41
ZSWIM1-201ENST00000372520 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
ZSWIM1-201ENST00000372520 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
ZSWIM1-201ENST00000372520 POLA1P09884 1462 aaPredicted RBP17.53■□□□□ 0.4
ZSWIM1-201ENST00000372520 EEA1Q15075 1411 aa17.53■□□□□ 0.4
ZSWIM1-201ENST00000372520 RAD54L2Q9Y4B4 1467 aa17.53■□□□□ 0.4
ZSWIM1-201ENST00000372520 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
ZSWIM1-201ENST00000372520 CUX2O14529 1486 aa17.48■□□□□ 0.39
ZSWIM1-201ENST00000372520 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
ZSWIM1-201ENST00000372520 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
ZSWIM1-201ENST00000372520 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
ZSWIM1-201ENST00000372520 WDR62O43379 1518 aa17.39■□□□□ 0.38
ZSWIM1-201ENST00000372520 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
ZSWIM1-201ENST00000372520 UBTFP17480 764 aaKnown RBP17.39■□□□□ 0.37
ZSWIM1-201ENST00000372520 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
ZSWIM1-201ENST00000372520 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
ZSWIM1-201ENST00000372520 IGF1RP08069 1367 aa17.37■□□□□ 0.37
ZSWIM1-201ENST00000372520 RAPGEF2Q9Y4G8 1499 aa17.36■□□□□ 0.37
ZSWIM1-201ENST00000372520 GOLGA3Q08378 1498 aa17.34■□□□□ 0.37
ZSWIM1-201ENST00000372520 TARBP1Q13395 1621 aaKnown RBP17.34■□□□□ 0.37
ZSWIM1-201ENST00000372520 PRXQ9BXM0 1461 aa17.32■□□□□ 0.36
ZSWIM1-201ENST00000372520 KIF21BO75037 1637 aa17.32■□□□□ 0.36
ZSWIM1-201ENST00000372520 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
ZSWIM1-201ENST00000372520 KCNA4P22459 653 aa17.3■□□□□ 0.36
ZSWIM1-201ENST00000372520 TRIM26Q12899 539 aaPredicted RBP17.3■□□□□ 0.36
ZSWIM1-201ENST00000372520 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
ZSWIM1-201ENST00000372520 AQRO60306 1485 aaKnown RBP eCLIP17.28■□□□□ 0.36
ZSWIM1-201ENST00000372520 CARMIL1Q5VZK9 1371 aa17.27■□□□□ 0.36
ZSWIM1-201ENST00000372520 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
ZSWIM1-201ENST00000372520 ZNF608Q9ULD9 1512 aaPredicted RBP17.27■□□□□ 0.35
ZSWIM1-201ENST00000372520 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
ZSWIM1-201ENST00000372520 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
ZSWIM1-201ENST00000372520 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
ZSWIM1-201ENST00000372520 ERICH3Q5RHP9 1530 aa17.22■□□□□ 0.35
ZSWIM1-201ENST00000372520 CEP162Q5TB80 1403 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms