RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
SFR1-202ENST00000369729 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
SFR1-202ENST00000369729 NISCHQ9Y2I1 1504 aa20.38■□□□□ 0.85
SFR1-202ENST00000369729 SENP3Q9H4L4 574 aaPredicted RBP19.49■□□□□ 0.71
SFR1-202ENST00000369729 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
SFR1-202ENST00000369729 FOXD1Q16676 465 aa18.31■□□□□ 0.52
SFR1-202ENST00000369729 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
SFR1-202ENST00000369729 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
SFR1-202ENST00000369729 MSH5O43196 834 aa17.14■□□□□ 0.33
SFR1-202ENST00000369729 ABCC9O60706 1549 aa17.13■□□□□ 0.33
SFR1-202ENST00000369729 ZCCHC6Q5VYS8 1495 aaKnown RBP17.06■□□□□ 0.32
SFR1-202ENST00000369729 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
SFR1-202ENST00000369729 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.3
SFR1-202ENST00000369729 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
SFR1-202ENST00000369729 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
SFR1-202ENST00000369729 PLPPR3Q6T4P5 718 aa16.91■□□□□ 0.3
SFR1-202ENST00000369729 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
SFR1-202ENST00000369729 ADRA2BP18089 450 aa16.84■□□□□ 0.29
SFR1-202ENST00000369729 NACADO15069 1562 aa16.81■□□□□ 0.28
SFR1-202ENST00000369729 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
SFR1-202ENST00000369729 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
SFR1-202ENST00000369729 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
SFR1-202ENST00000369729 UNC13AQ9UPW8 1703 aa16.2■□□□□ 0.18
SFR1-202ENST00000369729 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
SFR1-202ENST00000369729 BICRAQ9NZM4 1560 aa16.08■□□□□ 0.16
SFR1-202ENST00000369729 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
SFR1-202ENST00000369729 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
SFR1-202ENST00000369729 SMARCA4P51532 1647 aa15.71■□□□□ 0.11
SFR1-202ENST00000369729 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
SFR1-202ENST00000369729 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
SFR1-202ENST00000369729 EIF4G1Q04637 1599 aaKnown RBP15.68■□□□□ 0.1
SFR1-202ENST00000369729 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
SFR1-202ENST00000369729 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
SFR1-202ENST00000369729 SMARCA2P51531 1590 aa15.59■□□□□ 0.09
SFR1-202ENST00000369729 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
SFR1-202ENST00000369729 ATAD2BQ9ULI0 1458 aa15.54■□□□□ 0.08
SFR1-202ENST00000369729 WIZO95785 1651 aa15.52■□□□□ 0.08
SFR1-202ENST00000369729 CC2D2AQ9P2K1 1620 aa15.5■□□□□ 0.07
SFR1-202ENST00000369729 NCAPD3P42695 1498 aa15.48■□□□□ 0.07
SFR1-202ENST00000369729 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
SFR1-202ENST00000369729 DMRT2Q9Y5R5 561 aa15.45■□□□□ 0.06
SFR1-202ENST00000369729 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
SFR1-202ENST00000369729 TOP2AP11388 1531 aaKnown RBP15.43■□□□□ 0.06
SFR1-202ENST00000369729 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.03
SFR1-202ENST00000369729 SCAF1Q9H7N4 1312 aaKnown RBP15.25■□□□□ 0.03
SFR1-202ENST00000369729 CCDC88BA6NC98 1476 aa15.24■□□□□ 0.03
SFR1-202ENST00000369729 CADPSQ9ULU8 1353 aa15.08■□□□□ 0
SFR1-202ENST00000369729 CFTRP13569 1480 aa15.05■□□□□ 0
SFR1-202ENST00000369729 LAMC3Q9Y6N6 1575 aa15.02□□□□□ -0.01
SFR1-202ENST00000369729 PDS5BQ9NTI5 1447 aa14.95□□□□□ -0.02
SFR1-202ENST00000369729 CACNB1Q02641 598 aaPredicted RBP14.95□□□□□ -0.02
SFR1-202ENST00000369729 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
SFR1-202ENST00000369729 NESP48681 1621 aa14.9□□□□□ -0.02
SFR1-202ENST00000369729 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
SFR1-202ENST00000369729 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
SFR1-202ENST00000369729 CEP164Q9UPV0 1460 aa14.84□□□□□ -0.03
SFR1-202ENST00000369729 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
SFR1-202ENST00000369729 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.04
SFR1-202ENST00000369729 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
SFR1-202ENST00000369729 DCAF8L1A6NGE4 600 aa14.82□□□□□ -0.04
SFR1-202ENST00000369729 ABCC8Q09428 1581 aa14.8□□□□□ -0.04
SFR1-202ENST00000369729 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
SFR1-202ENST00000369729 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
SFR1-202ENST00000369729 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
SFR1-202ENST00000369729 TOP2BQ02880 1626 aa14.71□□□□□ -0.06
SFR1-202ENST00000369729 DNMBPQ6XZF7 1577 aa14.71□□□□□ -0.06
SFR1-202ENST00000369729 CUX1P39880 1505 aa14.69□□□□□ -0.06
SFR1-202ENST00000369729 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
SFR1-202ENST00000369729 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
SFR1-202ENST00000369729 TOPBP1Q92547 1522 aa14.67□□□□□ -0.06
SFR1-202ENST00000369729 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
SFR1-202ENST00000369729 URB2Q14146 1524 aaKnown RBP14.66□□□□□ -0.06
SFR1-202ENST00000369729 WDR62O43379 1518 aa14.62□□□□□ -0.07
SFR1-202ENST00000369729 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
SFR1-202ENST00000369729 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
SFR1-202ENST00000369729 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
SFR1-202ENST00000369729 POLA1P09884 1462 aaPredicted RBP14.58□□□□□ -0.08
SFR1-202ENST00000369729 SOGA1O94964 1423 aa14.57□□□□□ -0.08
SFR1-202ENST00000369729 EEA1Q15075 1411 aa14.56□□□□□ -0.08
SFR1-202ENST00000369729 RNF216Q9NWF9 866 aaPredicted RBP14.54□□□□□ -0.08
SFR1-202ENST00000369729 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
SFR1-202ENST00000369729 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
SFR1-202ENST00000369729 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
SFR1-202ENST00000369729 CUX2O14529 1486 aa14.49□□□□□ -0.09
SFR1-202ENST00000369729 RAD54L2Q9Y4B4 1467 aa14.49□□□□□ -0.09
SFR1-202ENST00000369729 FAM9AQ8IZU1 332 aaPredicted RBP14.46□□□□□ -0.09
SFR1-202ENST00000369729 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
SFR1-202ENST00000369729 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
SFR1-202ENST00000369729 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
SFR1-202ENST00000369729 TDRD9Q8NDG6 1382 aaKnown RBP14.4□□□□□ -0.1
SFR1-202ENST00000369729 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
SFR1-202ENST00000369729 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
SFR1-202ENST00000369729 RUSC2Q8N2Y8 1516 aa14.38□□□□□ -0.11
SFR1-202ENST00000369729 ABCA5Q8WWZ7 1642 aa14.36□□□□□ -0.11
SFR1-202ENST00000369729 ERICH3Q5RHP9 1530 aa14.36□□□□□ -0.11
SFR1-202ENST00000369729 GRIN2BQ13224 1484 aa14.35□□□□□ -0.11
SFR1-202ENST00000369729 IGF1RP08069 1367 aa14.35□□□□□ -0.11
SFR1-202ENST00000369729 AQRO60306 1485 aaKnown RBP eCLIP14.35□□□□□ -0.11
SFR1-202ENST00000369729 ZNF608Q9ULD9 1512 aaPredicted RBP14.34□□□□□ -0.11
SFR1-202ENST00000369729 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms