RNA–Protein interactions for RNA: ENST00000369705.3

ME1-201, Transcript of malic enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME1, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME1-201ENST00000369705 NISCHQ9Y2I1 1504 aa23.09■■□□□ 1.29
ME1-201ENST00000369705 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
ME1-201ENST00000369705 DCAF8L2P0C7V8 631 aa19.62■□□□□ 0.73
ME1-201ENST00000369705 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
ME1-201ENST00000369705 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
ME1-201ENST00000369705 ABCC9O60706 1549 aa19.18■□□□□ 0.66
ME1-201ENST00000369705 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
ME1-201ENST00000369705 SUPT5HO00267 1087 aaKnown RBP18.66■□□□□ 0.58
ME1-201ENST00000369705 NACADO15069 1562 aa18.63■□□□□ 0.57
ME1-201ENST00000369705 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
ME1-201ENST00000369705 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
ME1-201ENST00000369705 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
ME1-201ENST00000369705 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
ME1-201ENST00000369705 CECR2Q9BXF3 1484 aa18.07■□□□□ 0.48
ME1-201ENST00000369705 UNC13AQ9UPW8 1703 aa18.05■□□□□ 0.48
ME1-201ENST00000369705 RSF1Q96T23 1441 aaPredicted RBP18.02■□□□□ 0.48
ME1-201ENST00000369705 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
ME1-201ENST00000369705 MROH2BQ7Z745 1585 aa17.91■□□□□ 0.46
ME1-201ENST00000369705 BAZ1AQ9NRL2 1556 aaPredicted RBP17.81■□□□□ 0.44
ME1-201ENST00000369705 WIZO95785 1651 aa17.76■□□□□ 0.43
ME1-201ENST00000369705 SMARCA4P51532 1647 aa17.7■□□□□ 0.42
ME1-201ENST00000369705 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
ME1-201ENST00000369705 PELP1Q8IZL8 1130 aaKnown RBP17.55■□□□□ 0.4
ME1-201ENST00000369705 HRCP23327 699 aa17.49■□□□□ 0.39
ME1-201ENST00000369705 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
ME1-201ENST00000369705 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
ME1-201ENST00000369705 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
ME1-201ENST00000369705 CCDC88BA6NC98 1476 aa17.43■□□□□ 0.38
ME1-201ENST00000369705 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
ME1-201ENST00000369705 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
ME1-201ENST00000369705 PPARGC1BQ86YN6 1023 aaKnown RBP17.42■□□□□ 0.38
ME1-201ENST00000369705 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
ME1-201ENST00000369705 PEG3Q9GZU2 1588 aa17.36■□□□□ 0.37
ME1-201ENST00000369705 FAM9AQ8IZU1 332 aaPredicted RBP17.28■□□□□ 0.36
ME1-201ENST00000369705 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
ME1-201ENST00000369705 CC2D2AQ9P2K1 1620 aa17.19■□□□□ 0.34
ME1-201ENST00000369705 EHMT2Q96KQ7 1210 aa17.19■□□□□ 0.34
ME1-201ENST00000369705 LOC105371045A0A1W2PR82 267 aa17.19■□□□□ 0.34
ME1-201ENST00000369705 HMGXB3Q12766 1538 aa17.15■□□□□ 0.34
ME1-201ENST00000369705 ABCC8Q09428 1581 aa17.14■□□□□ 0.33
ME1-201ENST00000369705 SCAF1Q9H7N4 1312 aaKnown RBP17.03■□□□□ 0.32
ME1-201ENST00000369705 DNAJC5BQ9UF47 199 aa17.03■□□□□ 0.32
ME1-201ENST00000369705 PCGF6Q9BYE7 350 aa17■□□□□ 0.31
ME1-201ENST00000369705 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
ME1-201ENST00000369705 MYT1Q01538 1121 aa16.94■□□□□ 0.3
ME1-201ENST00000369705 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
ME1-201ENST00000369705 CFTRP13569 1480 aa16.92■□□□□ 0.3
ME1-201ENST00000369705 SOGA1O94964 1423 aa16.88■□□□□ 0.29
ME1-201ENST00000369705 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
ME1-201ENST00000369705 NESP48681 1621 aa16.83■□□□□ 0.28
ME1-201ENST00000369705 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
ME1-201ENST00000369705 CSRNP3Q8WYN3 585 aa16.8■□□□□ 0.28
ME1-201ENST00000369705 UBTFP17480 764 aaKnown RBP16.74■□□□□ 0.27
ME1-201ENST00000369705 FANCD2Q9BXW9 1451 aa16.74■□□□□ 0.27
ME1-201ENST00000369705 CUX1P39880 1505 aa16.71■□□□□ 0.27
ME1-201ENST00000369705 TOP2BQ02880 1626 aa16.7■□□□□ 0.26
ME1-201ENST00000369705 EEA1Q15075 1411 aa16.66■□□□□ 0.26
ME1-201ENST00000369705 RANGAP1P46060 587 aaPredicted RBP16.64■□□□□ 0.25
ME1-201ENST00000369705 PDS5BQ9NTI5 1447 aa16.63■□□□□ 0.25
ME1-201ENST00000369705 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
ME1-201ENST00000369705 BIVM-ERCC5R4GMW8 1640 aa16.61■□□□□ 0.25
ME1-201ENST00000369705 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
ME1-201ENST00000369705 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
ME1-201ENST00000369705 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
ME1-201ENST00000369705 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
ME1-201ENST00000369705 CUX2O14529 1486 aa16.54■□□□□ 0.24
ME1-201ENST00000369705 GOLGA3Q08378 1498 aa16.52■□□□□ 0.24
ME1-201ENST00000369705 TOPBP1Q92547 1522 aa16.52■□□□□ 0.23
ME1-201ENST00000369705 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
ME1-201ENST00000369705 URB2Q14146 1524 aaKnown RBP16.49■□□□□ 0.23
ME1-201ENST00000369705 TNIKQ9UKE5 1360 aa16.49■□□□□ 0.23
ME1-201ENST00000369705 RAPGEF2Q9Y4G8 1499 aa16.48■□□□□ 0.23
ME1-201ENST00000369705 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
ME1-201ENST00000369705 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
ME1-201ENST00000369705 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
ME1-201ENST00000369705 KIF21AQ7Z4S6 1674 aa16.45■□□□□ 0.22
ME1-201ENST00000369705 ERCC6Q03468 1493 aa16.45■□□□□ 0.22
ME1-201ENST00000369705 TTBK1Q5TCY1 1321 aaPredicted RBP16.43■□□□□ 0.22
ME1-201ENST00000369705 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
ME1-201ENST00000369705 IGF1RP08069 1367 aa16.42■□□□□ 0.22
ME1-201ENST00000369705 KIF21BO75037 1637 aa16.39■□□□□ 0.21
ME1-201ENST00000369705 PRXQ9BXM0 1461 aa16.37■□□□□ 0.21
ME1-201ENST00000369705 CARMIL1Q5VZK9 1371 aa16.37■□□□□ 0.21
ME1-201ENST00000369705 MRC2Q9UBG0 1479 aa16.35■□□□□ 0.21
ME1-201ENST00000369705 NEUROD1Q13562 356 aa16.35■□□□□ 0.21
ME1-201ENST00000369705 CLIP1P30622 1438 aa16.34■□□□□ 0.21
ME1-201ENST00000369705 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
ME1-201ENST00000369705 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
ME1-201ENST00000369705 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
ME1-201ENST00000369705 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
ME1-201ENST00000369705 ERICH3Q5RHP9 1530 aa16.28■□□□□ 0.2
ME1-201ENST00000369705 GAPVD1Q14C86 1478 aa16.27■□□□□ 0.19
ME1-201ENST00000369705 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
ME1-201ENST00000369705 APLP2Q06481 763 aa16.24■□□□□ 0.19
ME1-201ENST00000369705 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
ME1-201ENST00000369705 BCL11AQ9H165 835 aa16.2■□□□□ 0.18
ME1-201ENST00000369705 WDR62O43379 1518 aa16.18■□□□□ 0.18
ME1-201ENST00000369705 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
ME1-201ENST00000369705 TARBP1Q13395 1621 aaKnown RBP16.18■□□□□ 0.18
ME1-201ENST00000369705 FBLN2P98095 1184 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms