RNA–Protein interactions for RNA: ENST00000368390.7

MUC1-206, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-206ENST00000368390 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
MUC1-206ENST00000368390 CHIC1Q5VXU3 224 aa19.08■□□□□ 0.64
MUC1-206ENST00000368390 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
MUC1-206ENST00000368390 PHF23Q9BUL5 403 aaPredicted RBP16.78■□□□□ 0.28
MUC1-206ENST00000368390 SENP3Q9H4L4 574 aaPredicted RBP16.62■□□□□ 0.25
MUC1-206ENST00000368390 ABCC9O60706 1549 aa16.04■□□□□ 0.16
MUC1-206ENST00000368390 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
MUC1-206ENST00000368390 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
MUC1-206ENST00000368390 FOXD1Q16676 465 aa15.44■□□□□ 0.06
MUC1-206ENST00000368390 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
MUC1-206ENST00000368390 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
MUC1-206ENST00000368390 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
MUC1-206ENST00000368390 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
MUC1-206ENST00000368390 ADRA2BP18089 450 aa14.79□□□□□ -0.04
MUC1-206ENST00000368390 PABPN1Q86U42 306 aaKnown RBP eCLIP14.78□□□□□ -0.04
MUC1-206ENST00000368390 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
MUC1-206ENST00000368390 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
MUC1-206ENST00000368390 PIAS4Q8N2W9 510 aaPredicted RBP14.53□□□□□ -0.08
MUC1-206ENST00000368390 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
MUC1-206ENST00000368390 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
MUC1-206ENST00000368390 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
MUC1-206ENST00000368390 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
MUC1-206ENST00000368390 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
MUC1-206ENST00000368390 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
MUC1-206ENST00000368390 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
MUC1-206ENST00000368390 NACADO15069 1562 aa14.35□□□□□ -0.11
MUC1-206ENST00000368390 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
MUC1-206ENST00000368390 MSH5O43196 834 aa14.26□□□□□ -0.13
MUC1-206ENST00000368390 CUX2O14529 1486 aa14.12□□□□□ -0.15
MUC1-206ENST00000368390 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
MUC1-206ENST00000368390 SCRIBQ14160 1630 aa14.08□□□□□ -0.15
MUC1-206ENST00000368390 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
MUC1-206ENST00000368390 ERCC6Q03468 1493 aa13.89□□□□□ -0.19
MUC1-206ENST00000368390 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
MUC1-206ENST00000368390 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
MUC1-206ENST00000368390 PPP4R3CPQ6ZMV5 832 aa13.61□□□□□ -0.23
MUC1-206ENST00000368390 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
MUC1-206ENST00000368390 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
MUC1-206ENST00000368390 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
MUC1-206ENST00000368390 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
MUC1-206ENST00000368390 WIZO95785 1651 aa13.52□□□□□ -0.25
MUC1-206ENST00000368390 NESP48681 1621 aa13.5□□□□□ -0.25
MUC1-206ENST00000368390 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
MUC1-206ENST00000368390 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
MUC1-206ENST00000368390 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
MUC1-206ENST00000368390 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
MUC1-206ENST00000368390 TRHP20396 242 aaPredicted RBP13.36□□□□□ -0.27
MUC1-206ENST00000368390 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
MUC1-206ENST00000368390 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
MUC1-206ENST00000368390 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
MUC1-206ENST00000368390 ILDR1Q86SU0 546 aaPredicted RBP13.34□□□□□ -0.27
MUC1-206ENST00000368390 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
MUC1-206ENST00000368390 KIF21AQ7Z4S6 1674 aa13.31□□□□□ -0.28
MUC1-206ENST00000368390 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
MUC1-206ENST00000368390 DMRT2Q9Y5R5 561 aa13.27□□□□□ -0.29
MUC1-206ENST00000368390 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
MUC1-206ENST00000368390 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
MUC1-206ENST00000368390 CNKSR2Q8WXI2 1034 aa13.25□□□□□ -0.29
MUC1-206ENST00000368390 KCNA4P22459 653 aa13.23□□□□□ -0.29
MUC1-206ENST00000368390 NCBP3Q53F19 620 aaKnown RBP13.23□□□□□ -0.29
MUC1-206ENST00000368390 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
MUC1-206ENST00000368390 ARHGEF11O15085 1522 aa13.17□□□□□ -0.3
MUC1-206ENST00000368390 CYB5RLQ6IPT4 315 aa13.15□□□□□ -0.3
MUC1-206ENST00000368390 LAMC3Q9Y6N6 1575 aa13.14□□□□□ -0.31
MUC1-206ENST00000368390 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
MUC1-206ENST00000368390 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
MUC1-206ENST00000368390 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.32
MUC1-206ENST00000368390 MRC2Q9UBG0 1479 aa13.08□□□□□ -0.32
MUC1-206ENST00000368390 WDR62O43379 1518 aa13.07□□□□□ -0.32
MUC1-206ENST00000368390 NPM3O75607 178 aaKnown RBP13.05□□□□□ -0.32
MUC1-206ENST00000368390 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
MUC1-206ENST00000368390 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
MUC1-206ENST00000368390 ARAP1Q96P48 1450 aa12.98□□□□□ -0.33
MUC1-206ENST00000368390 HOXD11P31277 338 aaPredicted RBP12.98□□□□□ -0.33
MUC1-206ENST00000368390 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
MUC1-206ENST00000368390 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
MUC1-206ENST00000368390 CFTRP13569 1480 aa12.89□□□□□ -0.35
MUC1-206ENST00000368390 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
MUC1-206ENST00000368390 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
MUC1-206ENST00000368390 EEA1Q15075 1411 aa12.85□□□□□ -0.35
MUC1-206ENST00000368390 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
MUC1-206ENST00000368390 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
MUC1-206ENST00000368390 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
MUC1-206ENST00000368390 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
MUC1-206ENST00000368390 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
MUC1-206ENST00000368390 SOGA1O94964 1423 aa12.8□□□□□ -0.36
MUC1-206ENST00000368390 RUSC2Q8N2Y8 1516 aa12.76□□□□□ -0.37
MUC1-206ENST00000368390 CHD1O14646 1710 aa12.75□□□□□ -0.37
MUC1-206ENST00000368390 CUX1P39880 1505 aa12.75□□□□□ -0.37
MUC1-206ENST00000368390 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
MUC1-206ENST00000368390 ZNF608Q9ULD9 1512 aaPredicted RBP12.73□□□□□ -0.37
MUC1-206ENST00000368390 FANCD2Q9BXW9 1451 aa12.72□□□□□ -0.37
MUC1-206ENST00000368390 URB2Q14146 1524 aaKnown RBP12.71□□□□□ -0.38
MUC1-206ENST00000368390 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
MUC1-206ENST00000368390 KIF21BO75037 1637 aa12.66□□□□□ -0.38
MUC1-206ENST00000368390 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
MUC1-206ENST00000368390 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
MUC1-206ENST00000368390 DCAF8L1A6NGE4 600 aa12.66□□□□□ -0.38
MUC1-206ENST00000368390 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
MUC1-206ENST00000368390 FBLN2P98095 1184 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms