RNA–Protein interactions for RNA: ENST00000367981.7

NR1I3-203, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-203ENST00000367981 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
NR1I3-203ENST00000367981 CHIC1Q5VXU3 224 aa19.03■□□□□ 0.64
NR1I3-203ENST00000367981 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
NR1I3-203ENST00000367981 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
NR1I3-203ENST00000367981 SENP3Q9H4L4 574 aaPredicted RBP16.21■□□□□ 0.19
NR1I3-203ENST00000367981 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
NR1I3-203ENST00000367981 ABCC9O60706 1549 aa15.53■□□□□ 0.08
NR1I3-203ENST00000367981 PLPPR3Q6T4P5 718 aa15.53■□□□□ 0.08
NR1I3-203ENST00000367981 FOXD1Q16676 465 aa15.11■□□□□ 0.01
NR1I3-203ENST00000367981 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
NR1I3-203ENST00000367981 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
NR1I3-203ENST00000367981 NACADO15069 1562 aa14.82□□□□□ -0.04
NR1I3-203ENST00000367981 ADRA2BP18089 450 aa14.8□□□□□ -0.04
NR1I3-203ENST00000367981 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
NR1I3-203ENST00000367981 MYO15BQ96JP2 1530 aa14.75□□□□□ -0.05
NR1I3-203ENST00000367981 ZCCHC6Q5VYS8 1495 aaKnown RBP14.74□□□□□ -0.05
NR1I3-203ENST00000367981 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
NR1I3-203ENST00000367981 DCAF1Q9Y4B6 1507 aa14.69□□□□□ -0.06
NR1I3-203ENST00000367981 PABPN1Q86U42 306 aaKnown RBP eCLIP14.37□□□□□ -0.11
NR1I3-203ENST00000367981 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
NR1I3-203ENST00000367981 SCRIBQ14160 1630 aa14.32□□□□□ -0.12
NR1I3-203ENST00000367981 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-203ENST00000367981 SHROOM4Q9ULL8 1493 aa14.29□□□□□ -0.12
NR1I3-203ENST00000367981 BICRAQ9NZM4 1560 aa14.27□□□□□ -0.12
NR1I3-203ENST00000367981 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
NR1I3-203ENST00000367981 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
NR1I3-203ENST00000367981 EIF4G1Q04637 1599 aaKnown RBP14□□□□□ -0.17
NR1I3-203ENST00000367981 DNAJC5Q9H3Z4 198 aa13.87□□□□□ -0.19
NR1I3-203ENST00000367981 KCNA4P22459 653 aa13.81□□□□□ -0.2
NR1I3-203ENST00000367981 PPP4R3CPQ6ZMV5 832 aa13.77□□□□□ -0.21
NR1I3-203ENST00000367981 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.21
NR1I3-203ENST00000367981 MSH5O43196 834 aa13.71□□□□□ -0.21
NR1I3-203ENST00000367981 SMARCA4P51532 1647 aa13.71□□□□□ -0.22
NR1I3-203ENST00000367981 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
NR1I3-203ENST00000367981 CUX2O14529 1486 aa13.66□□□□□ -0.22
NR1I3-203ENST00000367981 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
NR1I3-203ENST00000367981 ATAD2BQ9ULI0 1458 aa13.64□□□□□ -0.23
NR1I3-203ENST00000367981 MROH2BQ7Z745 1585 aa13.59□□□□□ -0.23
NR1I3-203ENST00000367981 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
NR1I3-203ENST00000367981 PEG3Q9GZU2 1588 aa13.58□□□□□ -0.23
NR1I3-203ENST00000367981 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
NR1I3-203ENST00000367981 ERCC6Q03468 1493 aa13.52□□□□□ -0.25
NR1I3-203ENST00000367981 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
NR1I3-203ENST00000367981 WIZO95785 1651 aa13.45□□□□□ -0.26
NR1I3-203ENST00000367981 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
NR1I3-203ENST00000367981 TOP2AP11388 1531 aaKnown RBP13.38□□□□□ -0.27
NR1I3-203ENST00000367981 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
NR1I3-203ENST00000367981 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
NR1I3-203ENST00000367981 NPM3O75607 178 aaKnown RBP13.32□□□□□ -0.28
NR1I3-203ENST00000367981 LAMC3Q9Y6N6 1575 aa13.29□□□□□ -0.28
NR1I3-203ENST00000367981 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
NR1I3-203ENST00000367981 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
NR1I3-203ENST00000367981 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
NR1I3-203ENST00000367981 CNKSR2Q8WXI2 1034 aa13.27□□□□□ -0.29
NR1I3-203ENST00000367981 THOC2Q8NI27 1593 aaKnown RBP13.24□□□□□ -0.29
NR1I3-203ENST00000367981 NESP48681 1621 aa13.23□□□□□ -0.29
NR1I3-203ENST00000367981 CCDC88BA6NC98 1476 aa13.2□□□□□ -0.3
NR1I3-203ENST00000367981 CFTRP13569 1480 aa13.18□□□□□ -0.3
NR1I3-203ENST00000367981 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
NR1I3-203ENST00000367981 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
NR1I3-203ENST00000367981 FANCD2Q9BXW9 1451 aa13.11□□□□□ -0.31
NR1I3-203ENST00000367981 CEP164Q9UPV0 1460 aa13.11□□□□□ -0.31
NR1I3-203ENST00000367981 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
NR1I3-203ENST00000367981 MRC2Q9UBG0 1479 aa13.07□□□□□ -0.32
NR1I3-203ENST00000367981 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
NR1I3-203ENST00000367981 TRIM41Q8WV44 630 aa13.05□□□□□ -0.32
NR1I3-203ENST00000367981 WDR62O43379 1518 aa13.04□□□□□ -0.32
NR1I3-203ENST00000367981 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
NR1I3-203ENST00000367981 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
NR1I3-203ENST00000367981 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
NR1I3-203ENST00000367981 OSCARQ8IYS5 282 aa12.94□□□□□ -0.34
NR1I3-203ENST00000367981 URB2Q14146 1524 aaKnown RBP12.91□□□□□ -0.34
NR1I3-203ENST00000367981 DNMBPQ6XZF7 1577 aa12.89□□□□□ -0.35
NR1I3-203ENST00000367981 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
NR1I3-203ENST00000367981 CSRNP3Q8WYN3 585 aa12.86□□□□□ -0.35
NR1I3-203ENST00000367981 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
NR1I3-203ENST00000367981 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
NR1I3-203ENST00000367981 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
NR1I3-203ENST00000367981 SOGA1O94964 1423 aa12.78□□□□□ -0.36
NR1I3-203ENST00000367981 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.37
NR1I3-203ENST00000367981 CUX1P39880 1505 aa12.77□□□□□ -0.37
NR1I3-203ENST00000367981 ZBTB22O15209 634 aa12.76□□□□□ -0.37
NR1I3-203ENST00000367981 FGD5Q6ZNL6 1462 aa12.75□□□□□ -0.37
NR1I3-203ENST00000367981 RIMBP3CA6NJZ7 1639 aa12.73□□□□□ -0.37
NR1I3-203ENST00000367981 RIMBP3BA6NNM3 1639 aa12.73□□□□□ -0.37
NR1I3-203ENST00000367981 RIMBP3Q9UFD9 1639 aa12.73□□□□□ -0.37
NR1I3-203ENST00000367981 WDR97A6NE52 1622 aa12.71□□□□□ -0.37
NR1I3-203ENST00000367981 TOP2BQ02880 1626 aa12.71□□□□□ -0.37
NR1I3-203ENST00000367981 ARHGEF11O15085 1522 aa12.69□□□□□ -0.38
NR1I3-203ENST00000367981 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
NR1I3-203ENST00000367981 TARBP1Q13395 1621 aaKnown RBP12.69□□□□□ -0.38
NR1I3-203ENST00000367981 BIVM-ERCC5R4GMW8 1640 aa12.69□□□□□ -0.38
NR1I3-203ENST00000367981 ZNF608Q9ULD9 1512 aaPredicted RBP12.67□□□□□ -0.38
NR1I3-203ENST00000367981 TDRD9Q8NDG6 1382 aaKnown RBP12.67□□□□□ -0.38
NR1I3-203ENST00000367981 SYNJ1O43426 1573 aa12.65□□□□□ -0.38
NR1I3-203ENST00000367981 EIF4G3O43432 1585 aaKnown RBP12.65□□□□□ -0.38
NR1I3-203ENST00000367981 ABCA10Q8WWZ4 1543 aa12.65□□□□□ -0.38
NR1I3-203ENST00000367981 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
NR1I3-203ENST00000367981 GRIN2BQ13224 1484 aa12.63□□□□□ -0.39
NR1I3-203ENST00000367981 GAPVD1Q14C86 1478 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms