RNA–Protein interactions for RNA: ENST00000367927.9

VNN3-202, Transcript of vanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VNN3, Length 1,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-202ENST00000367927 NISCHQ9Y2I1 1504 aa16.05■□□□□ 0.16
VNN3-202ENST00000367927 CHIC1Q5VXU3 224 aa15.22■□□□□ 0.03
VNN3-202ENST00000367927 AEBP2Q6ZN18 517 aaPredicted RBP15.08■□□□□ 0
VNN3-202ENST00000367927 CCDC180Q9P1Z9 1646 aa14.01□□□□□ -0.17
VNN3-202ENST00000367927 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
VNN3-202ENST00000367927 ZCCHC6Q5VYS8 1495 aaKnown RBP13.49□□□□□ -0.25
VNN3-202ENST00000367927 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
VNN3-202ENST00000367927 DCAF8L2P0C7V8 631 aa13.24□□□□□ -0.29
VNN3-202ENST00000367927 SHROOM4Q9ULL8 1493 aa13.13□□□□□ -0.31
VNN3-202ENST00000367927 MYO15BQ96JP2 1530 aa13.11□□□□□ -0.31
VNN3-202ENST00000367927 ABCC9O60706 1549 aa13.09□□□□□ -0.31
VNN3-202ENST00000367927 NACADO15069 1562 aa13.01□□□□□ -0.33
VNN3-202ENST00000367927 POTEDQ86YR6 584 aa12.9□□□□□ -0.34
VNN3-202ENST00000367927 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
VNN3-202ENST00000367927 SCRIBQ14160 1630 aa12.85□□□□□ -0.35
VNN3-202ENST00000367927 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.38
VNN3-202ENST00000367927 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
VNN3-202ENST00000367927 PLPPR3Q6T4P5 718 aa12.65□□□□□ -0.38
VNN3-202ENST00000367927 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
VNN3-202ENST00000367927 RSF1Q96T23 1441 aaPredicted RBP12.47□□□□□ -0.41
VNN3-202ENST00000367927 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
VNN3-202ENST00000367927 CECR2Q9BXF3 1484 aa12.42□□□□□ -0.42
VNN3-202ENST00000367927 BAZ1AQ9NRL2 1556 aaPredicted RBP12.42□□□□□ -0.42
VNN3-202ENST00000367927 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
VNN3-202ENST00000367927 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
VNN3-202ENST00000367927 SMARCA4P51532 1647 aa12.34□□□□□ -0.43
VNN3-202ENST00000367927 WIZO95785 1651 aa12.3□□□□□ -0.44
VNN3-202ENST00000367927 EHMT2Q96KQ7 1210 aa12.28□□□□□ -0.44
VNN3-202ENST00000367927 TOP2AP11388 1531 aaKnown RBP12.19□□□□□ -0.46
VNN3-202ENST00000367927 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
VNN3-202ENST00000367927 SMARCA2P51531 1590 aa12.13□□□□□ -0.47
VNN3-202ENST00000367927 KCNA4P22459 653 aa12.09□□□□□ -0.47
VNN3-202ENST00000367927 ATAD2BQ9ULI0 1458 aa12.09□□□□□ -0.47
VNN3-202ENST00000367927 EIF4G1Q04637 1599 aaKnown RBP12.07□□□□□ -0.48
VNN3-202ENST00000367927 BAZ1BQ9UIG0 1483 aaKnown RBP12.05□□□□□ -0.48
VNN3-202ENST00000367927 CCDC88BA6NC98 1476 aa12.04□□□□□ -0.48
VNN3-202ENST00000367927 ADRA2BP18089 450 aa12.04□□□□□ -0.48
VNN3-202ENST00000367927 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
VNN3-202ENST00000367927 NCAPD3P42695 1498 aa11.98□□□□□ -0.49
VNN3-202ENST00000367927 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
VNN3-202ENST00000367927 FOXD1Q16676 465 aa11.95□□□□□ -0.5
VNN3-202ENST00000367927 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
VNN3-202ENST00000367927 ABCC8Q09428 1581 aa11.82□□□□□ -0.52
VNN3-202ENST00000367927 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
VNN3-202ENST00000367927 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.53
VNN3-202ENST00000367927 PPP6R1Q9UPN7 881 aa11.76□□□□□ -0.53
VNN3-202ENST00000367927 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
VNN3-202ENST00000367927 CFTRP13569 1480 aa11.74□□□□□ -0.53
VNN3-202ENST00000367927 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
VNN3-202ENST00000367927 LOC105371045A0A1W2PR82 267 aa11.71□□□□□ -0.54
VNN3-202ENST00000367927 EEA1Q15075 1411 aa11.69□□□□□ -0.54
VNN3-202ENST00000367927 CADPSQ9ULU8 1353 aa11.69□□□□□ -0.54
VNN3-202ENST00000367927 SYNJ1O43426 1573 aa11.68□□□□□ -0.54
VNN3-202ENST00000367927 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
VNN3-202ENST00000367927 BIVM-ERCC5R4GMW8 1640 aa11.65□□□□□ -0.54
VNN3-202ENST00000367927 SOGA1O94964 1423 aa11.6□□□□□ -0.55
VNN3-202ENST00000367927 LAMC3Q9Y6N6 1575 aa11.59□□□□□ -0.55
VNN3-202ENST00000367927 CUX1P39880 1505 aa11.58□□□□□ -0.56
VNN3-202ENST00000367927 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
VNN3-202ENST00000367927 FANCD2Q9BXW9 1451 aa11.56□□□□□ -0.56
VNN3-202ENST00000367927 RUSC2Q8N2Y8 1516 aa11.54□□□□□ -0.56
VNN3-202ENST00000367927 KIF21BO75037 1637 aa11.51□□□□□ -0.57
VNN3-202ENST00000367927 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
VNN3-202ENST00000367927 NESP48681 1621 aa11.51□□□□□ -0.57
VNN3-202ENST00000367927 PDS5BQ9NTI5 1447 aa11.5□□□□□ -0.57
VNN3-202ENST00000367927 CEP164Q9UPV0 1460 aa11.5□□□□□ -0.57
VNN3-202ENST00000367927 DNMBPQ6XZF7 1577 aa11.48□□□□□ -0.57
VNN3-202ENST00000367927 KIF27Q86VH2 1401 aa11.48□□□□□ -0.57
VNN3-202ENST00000367927 TNIKQ9UKE5 1360 aa11.47□□□□□ -0.57
VNN3-202ENST00000367927 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
VNN3-202ENST00000367927 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
VNN3-202ENST00000367927 TOPBP1Q92547 1522 aa11.43□□□□□ -0.58
VNN3-202ENST00000367927 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
VNN3-202ENST00000367927 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
VNN3-202ENST00000367927 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
VNN3-202ENST00000367927 CEP162Q5TB80 1403 aa11.41□□□□□ -0.58
VNN3-202ENST00000367927 CUX2O14529 1486 aa11.4□□□□□ -0.58
VNN3-202ENST00000367927 PRXQ9BXM0 1461 aa11.39□□□□□ -0.59
VNN3-202ENST00000367927 POLA1P09884 1462 aaPredicted RBP11.38□□□□□ -0.59
VNN3-202ENST00000367927 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
VNN3-202ENST00000367927 URB2Q14146 1524 aaKnown RBP11.38□□□□□ -0.59
VNN3-202ENST00000367927 ABCA10Q8WWZ4 1543 aa11.36□□□□□ -0.59
VNN3-202ENST00000367927 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
VNN3-202ENST00000367927 TRIM26Q12899 539 aaPredicted RBP11.33□□□□□ -0.6
VNN3-202ENST00000367927 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.6
VNN3-202ENST00000367927 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
VNN3-202ENST00000367927 IGF1RP08069 1367 aa11.32□□□□□ -0.6
VNN3-202ENST00000367927 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
VNN3-202ENST00000367927 WDR97A6NE52 1622 aa11.32□□□□□ -0.6
VNN3-202ENST00000367927 CLIP1P30622 1438 aa11.32□□□□□ -0.6
VNN3-202ENST00000367927 PCGF6Q9BYE7 350 aa11.31□□□□□ -0.6
VNN3-202ENST00000367927 CARMIL1Q5VZK9 1371 aa11.3□□□□□ -0.6
VNN3-202ENST00000367927 CUL7Q14999 1698 aa11.29□□□□□ -0.6
VNN3-202ENST00000367927 ERCC6Q03468 1493 aa11.27□□□□□ -0.61
VNN3-202ENST00000367927 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
VNN3-202ENST00000367927 WDR62O43379 1518 aa11.25□□□□□ -0.61
VNN3-202ENST00000367927 TARBP1Q13395 1621 aaKnown RBP11.25□□□□□ -0.61
VNN3-202ENST00000367927 GAPVD1Q14C86 1478 aa11.24□□□□□ -0.61
VNN3-202ENST00000367927 ZBTB22O15209 634 aa11.23□□□□□ -0.61
VNN3-202ENST00000367927 VPS8Q8N3P4 1428 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms