RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 NISCHQ9Y2I1 1504 aa9.46□□□□□ -0.9
PTPN22-201ENST00000359785 CCDC180Q9P1Z9 1646 aa8.51□□□□□ -1.05
PTPN22-201ENST00000359785 DCAF1Q9Y4B6 1507 aa8.32□□□□□ -1.08
PTPN22-201ENST00000359785 ZCCHC6Q5VYS8 1495 aaKnown RBP8.21□□□□□ -1.09
PTPN22-201ENST00000359785 MYO15BQ96JP2 1530 aa8.08□□□□□ -1.12
PTPN22-201ENST00000359785 ABCC9O60706 1549 aa7.9□□□□□ -1.15
PTPN22-201ENST00000359785 AEBP2Q6ZN18 517 aaPredicted RBP7.85□□□□□ -1.15
PTPN22-201ENST00000359785 POTEDQ86YR6 584 aa7.84□□□□□ -1.15
PTPN22-201ENST00000359785 EIF4G1Q04637 1599 aaKnown RBP7.81□□□□□ -1.16
PTPN22-201ENST00000359785 PELP1Q8IZL8 1130 aaKnown RBP7.77□□□□□ -1.17
PTPN22-201ENST00000359785 HRCP23327 699 aa7.74□□□□□ -1.17
PTPN22-201ENST00000359785 RB1CC1Q8TDY2 1594 aa7.65□□□□□ -1.18
PTPN22-201ENST00000359785 NACADO15069 1562 aa7.64□□□□□ -1.19
PTPN22-201ENST00000359785 MYT1Q01538 1121 aa7.62□□□□□ -1.19
PTPN22-201ENST00000359785 SHROOM4Q9ULL8 1493 aa7.57□□□□□ -1.2
PTPN22-201ENST00000359785 BAZ1AQ9NRL2 1556 aaPredicted RBP7.54□□□□□ -1.2
PTPN22-201ENST00000359785 CHIC1Q5VXU3 224 aa7.53□□□□□ -1.2
PTPN22-201ENST00000359785 WRNQ14191 1432 aaPredicted RBP eCLIP7.51□□□□□ -1.21
PTPN22-201ENST00000359785 PEG3Q9GZU2 1588 aa7.47□□□□□ -1.21
PTPN22-201ENST00000359785 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.21
PTPN22-201ENST00000359785 TTBK1Q5TCY1 1321 aaPredicted RBP7.39□□□□□ -1.23
PTPN22-201ENST00000359785 KIF21BO75037 1637 aa7.38□□□□□ -1.23
PTPN22-201ENST00000359785 UNC13AQ9UPW8 1703 aa7.37□□□□□ -1.23
PTPN22-201ENST00000359785 RSF1Q96T23 1441 aaPredicted RBP7.35□□□□□ -1.23
PTPN22-201ENST00000359785 PRDM2Q13029 1718 aa7.35□□□□□ -1.23
PTPN22-201ENST00000359785 TOP2AP11388 1531 aaKnown RBP7.34□□□□□ -1.23
PTPN22-201ENST00000359785 EEA1Q15075 1411 aa7.33□□□□□ -1.24
PTPN22-201ENST00000359785 TRIM26Q12899 539 aaPredicted RBP7.31□□□□□ -1.24
PTPN22-201ENST00000359785 CUX2O14529 1486 aa7.29□□□□□ -1.24
PTPN22-201ENST00000359785 CLSPNQ9HAW4 1339 aa7.28□□□□□ -1.24
PTPN22-201ENST00000359785 BIVM-ERCC5R4GMW8 1640 aa7.27□□□□□ -1.25
PTPN22-201ENST00000359785 BAZ1BQ9UIG0 1483 aaKnown RBP7.25□□□□□ -1.25
PTPN22-201ENST00000359785 SMARCA4P51532 1647 aa7.24□□□□□ -1.25
PTPN22-201ENST00000359785 SMARCA2P51531 1590 aa7.24□□□□□ -1.25
PTPN22-201ENST00000359785 ERICH3Q5RHP9 1530 aa7.2□□□□□ -1.26
PTPN22-201ENST00000359785 MAP3K1Q13233 1512 aa7.2□□□□□ -1.26
PTPN22-201ENST00000359785 BICRAQ9NZM4 1560 aa7.2□□□□□ -1.26
PTPN22-201ENST00000359785 WIZO95785 1651 aa7.18□□□□□ -1.26
PTPN22-201ENST00000359785 SYNJ1O43426 1573 aa7.17□□□□□ -1.26
PTPN22-201ENST00000359785 POLR1AO95602 1720 aaPredicted RBP7.15□□□□□ -1.26
PTPN22-201ENST00000359785 MROH2BQ7Z745 1585 aa7.15□□□□□ -1.26
PTPN22-201ENST00000359785 SCRIBQ14160 1630 aa7.14□□□□□ -1.27
PTPN22-201ENST00000359785 TNIKQ9UKE5 1360 aa7.12□□□□□ -1.27
PTPN22-201ENST00000359785 CFAP43Q8NDM7 1665 aa7.12□□□□□ -1.27
PTPN22-201ENST00000359785 GOLGA3Q08378 1498 aa7.12□□□□□ -1.27
PTPN22-201ENST00000359785 SCAF1Q9H7N4 1312 aaKnown RBP7.11□□□□□ -1.27
PTPN22-201ENST00000359785 KIF21AQ7Z4S6 1674 aa7.11□□□□□ -1.27
PTPN22-201ENST00000359785 TOP2BQ02880 1626 aa7.1□□□□□ -1.27
PTPN22-201ENST00000359785 TRIM41Q8WV44 630 aa7.07□□□□□ -1.28
PTPN22-201ENST00000359785 HMGXB3Q12766 1538 aa7.06□□□□□ -1.28
PTPN22-201ENST00000359785 ACIN1Q9UKV3 1341 aaKnown RBP7.06□□□□□ -1.28
PTPN22-201ENST00000359785 ABCA5Q8WWZ7 1642 aa7.03□□□□□ -1.28
PTPN22-201ENST00000359785 CEP164Q9UPV0 1460 aa7.01□□□□□ -1.29
PTPN22-201ENST00000359785 RRBP1Q9P2E9 1410 aaKnown RBP7□□□□□ -1.29
PTPN22-201ENST00000359785 PCGF6Q9BYE7 350 aa7□□□□□ -1.29
PTPN22-201ENST00000359785 CEP162Q5TB80 1403 aa6.98□□□□□ -1.29
PTPN22-201ENST00000359785 THOC2Q8NI27 1593 aaKnown RBP6.97□□□□□ -1.29
PTPN22-201ENST00000359785 CCDC88BA6NC98 1476 aa6.96□□□□□ -1.3
PTPN22-201ENST00000359785 VPS8Q8N3P4 1428 aa6.96□□□□□ -1.3
PTPN22-201ENST00000359785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.96□□□□□ -1.3
PTPN22-201ENST00000359785 WDR97A6NE52 1622 aa6.96□□□□□ -1.3
PTPN22-201ENST00000359785 CECR2Q9BXF3 1484 aa6.95□□□□□ -1.3
PTPN22-201ENST00000359785 PPARGC1BQ86YN6 1023 aaKnown RBP6.94□□□□□ -1.3
PTPN22-201ENST00000359785 PRXQ9BXM0 1461 aa6.94□□□□□ -1.3
PTPN22-201ENST00000359785 GCC2Q8IWJ2 1684 aa6.93□□□□□ -1.3
PTPN22-201ENST00000359785 NCAPD3P42695 1498 aa6.93□□□□□ -1.3
PTPN22-201ENST00000359785 ABCC8Q09428 1581 aa6.91□□□□□ -1.3
PTPN22-201ENST00000359785 AQRO60306 1485 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN22-201ENST00000359785 SUPT5HO00267 1087 aaKnown RBP6.9□□□□□ -1.3
PTPN22-201ENST00000359785 CTTNBP2Q8WZ74 1663 aa6.9□□□□□ -1.31
PTPN22-201ENST00000359785 CC2D2AQ9P2K1 1620 aa6.89□□□□□ -1.31
PTPN22-201ENST00000359785 HECW1Q76N89 1606 aa6.88□□□□□ -1.31
PTPN22-201ENST00000359785 CENPBP07199 599 aaPredicted RBP6.88□□□□□ -1.31
PTPN22-201ENST00000359785 MAPKBP1O60336 1514 aa6.88□□□□□ -1.31
PTPN22-201ENST00000359785 ARAP1Q96P48 1450 aa6.87□□□□□ -1.31
PTPN22-201ENST00000359785 ATAD2BQ9ULI0 1458 aa6.86□□□□□ -1.31
PTPN22-201ENST00000359785 TIAM1Q13009 1591 aa6.86□□□□□ -1.31
PTPN22-201ENST00000359785 EFCAB5A4FU69 1503 aa6.86□□□□□ -1.31
PTPN22-201ENST00000359785 CUL7Q14999 1698 aa6.86□□□□□ -1.31
PTPN22-201ENST00000359785 ARHGEF11O15085 1522 aa6.85□□□□□ -1.31
PTPN22-201ENST00000359785 KDM5BQ9UGL1 1544 aa6.84□□□□□ -1.31
PTPN22-201ENST00000359785 CLIP1P30622 1438 aa6.84□□□□□ -1.32
PTPN22-201ENST00000359785 SAMD9Q5K651 1589 aa6.83□□□□□ -1.32
PTPN22-201ENST00000359785 AKNAQ7Z591 1439 aa6.83□□□□□ -1.32
PTPN22-201ENST00000359785 NEUROD1Q13562 356 aa6.83□□□□□ -1.32
PTPN22-201ENST00000359785 ZMYM4Q5VZL5 1548 aa6.82□□□□□ -1.32
PTPN22-201ENST00000359785 LRRIQ1Q96JM4 1722 aa6.81□□□□□ -1.32
PTPN22-201ENST00000359785 E9PCH4 1651 aa6.8□□□□□ -1.32
PTPN22-201ENST00000359785 ZNF316A6NFI3 1004 aaPredicted RBP6.79□□□□□ -1.32
PTPN22-201ENST00000359785 NCOA2Q15596 1464 aa6.79□□□□□ -1.32
PTPN22-201ENST00000359785 TIMELESSQ9UNS1 1208 aa6.79□□□□□ -1.32
PTPN22-201ENST00000359785 VIRMAQ69YN4 1812 aaKnown RBP6.79□□□□□ -1.32
PTPN22-201ENST00000359785 DHX57Q6P158 1386 aaKnown RBP6.78□□□□□ -1.32
PTPN22-201ENST00000359785 LAMC3Q9Y6N6 1575 aa6.78□□□□□ -1.32
PTPN22-201ENST00000359785 LOC105371045A0A1W2PR82 267 aa6.77□□□□□ -1.33
PTPN22-201ENST00000359785 LAMC1P11047 1609 aa6.77□□□□□ -1.33
PTPN22-201ENST00000359785 MYT1LQ9UL68 1186 aa6.75□□□□□ -1.33
PTPN22-201ENST00000359785 DIEXFQ68CQ4 756 aaKnown RBP6.75□□□□□ -1.33
PTPN22-201ENST00000359785 FYCO1Q9BQS8 1478 aa6.75□□□□□ -1.33
PTPN22-201ENST00000359785 CROCC2H7BZ55 1655 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms