RNA–Protein interactions for RNA: ENST00000357491.10

ZNF43-202, Transcript of zinc finger protein 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF43, Length 5,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-202ENST00000357491 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
ZNF43-202ENST00000357491 DCAF8L2P0C7V8 631 aa18.03■□□□□ 0.48
ZNF43-202ENST00000357491 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
ZNF43-202ENST00000357491 ABCC9O60706 1549 aa16.96■□□□□ 0.31
ZNF43-202ENST00000357491 RB1CC1Q8TDY2 1594 aa16.89■□□□□ 0.29
ZNF43-202ENST00000357491 NACADO15069 1562 aa16.87■□□□□ 0.29
ZNF43-202ENST00000357491 ZCCHC6Q5VYS8 1495 aaKnown RBP16.79■□□□□ 0.28
ZNF43-202ENST00000357491 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
ZNF43-202ENST00000357491 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
ZNF43-202ENST00000357491 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
ZNF43-202ENST00000357491 MYO15BQ96JP2 1530 aa16.68■□□□□ 0.26
ZNF43-202ENST00000357491 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
ZNF43-202ENST00000357491 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
ZNF43-202ENST00000357491 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
ZNF43-202ENST00000357491 APLP2Q06481 763 aa16.06■□□□□ 0.16
ZNF43-202ENST00000357491 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
ZNF43-202ENST00000357491 BAZ1AQ9NRL2 1556 aaPredicted RBP15.97■□□□□ 0.15
ZNF43-202ENST00000357491 SMARCA2P51531 1590 aa15.87■□□□□ 0.13
ZNF43-202ENST00000357491 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.11
ZNF43-202ENST00000357491 UBTFP17480 764 aaKnown RBP15.57■□□□□ 0.08
ZNF43-202ENST00000357491 RSF1Q96T23 1441 aaPredicted RBP15.54■□□□□ 0.08
ZNF43-202ENST00000357491 EEA1Q15075 1411 aa15.5■□□□□ 0.07
ZNF43-202ENST00000357491 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
ZNF43-202ENST00000357491 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
ZNF43-202ENST00000357491 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
ZNF43-202ENST00000357491 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
ZNF43-202ENST00000357491 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
ZNF43-202ENST00000357491 CECR2Q9BXF3 1484 aa15.36■□□□□ 0.05
ZNF43-202ENST00000357491 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
ZNF43-202ENST00000357491 ATAD2BQ9ULI0 1458 aa15.33■□□□□ 0.04
ZNF43-202ENST00000357491 HMGXB3Q12766 1538 aa15.32■□□□□ 0.04
ZNF43-202ENST00000357491 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
ZNF43-202ENST00000357491 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
ZNF43-202ENST00000357491 MROH2BQ7Z745 1585 aa15.24■□□□□ 0.03
ZNF43-202ENST00000357491 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
ZNF43-202ENST00000357491 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
ZNF43-202ENST00000357491 CDK11AQ9UQ88 783 aaPredicted RBP15.22■□□□□ 0.03
ZNF43-202ENST00000357491 WRNQ14191 1432 aaPredicted RBP eCLIP15.21■□□□□ 0.035e-6■■■■■ 29.2
ZNF43-202ENST00000357491 CADPSQ9ULU8 1353 aa15.21■□□□□ 0.03
ZNF43-202ENST00000357491 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.02
ZNF43-202ENST00000357491 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
ZNF43-202ENST00000357491 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
ZNF43-202ENST00000357491 CEP164Q9UPV0 1460 aa15.15■□□□□ 0.02
ZNF43-202ENST00000357491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.13■□□□□ 0.01
ZNF43-202ENST00000357491 HNRNPUL2Q1KMD3 747 aaKnown RBP15.13■□□□□ 0.01
ZNF43-202ENST00000357491 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
ZNF43-202ENST00000357491 CCDC88BA6NC98 1476 aa15.11■□□□□ 0.01
ZNF43-202ENST00000357491 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
ZNF43-202ENST00000357491 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
ZNF43-202ENST00000357491 CHMP7Q8WUX9 453 aaPredicted RBP15.07■□□□□ 0
ZNF43-202ENST00000357491 FBLN2P98095 1184 aa15.05■□□□□ -0
ZNF43-202ENST00000357491 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
ZNF43-202ENST00000357491 CC2D2AQ9P2K1 1620 aa15.05■□□□□ -0
ZNF43-202ENST00000357491 WIZO95785 1651 aa15.03■□□□□ -0
ZNF43-202ENST00000357491 GOLGA3Q08378 1498 aa15.02■□□□□ -0
ZNF43-202ENST00000357491 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
ZNF43-202ENST00000357491 LAMC3Q9Y6N6 1575 aa14.99□□□□□ -0.01
ZNF43-202ENST00000357491 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
ZNF43-202ENST00000357491 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
ZNF43-202ENST00000357491 MYT1LQ9UL68 1186 aa14.94□□□□□ -0.02
ZNF43-202ENST00000357491 SOGA1O94964 1423 aa14.91□□□□□ -0.02
ZNF43-202ENST00000357491 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
ZNF43-202ENST00000357491 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
ZNF43-202ENST00000357491 CFTRP13569 1480 aa14.87□□□□□ -0.03
ZNF43-202ENST00000357491 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
ZNF43-202ENST00000357491 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
ZNF43-202ENST00000357491 CUX2O14529 1486 aa14.84□□□□□ -0.03
ZNF43-202ENST00000357491 IFT140Q96RY7 1462 aa14.83□□□□□ -0.03
ZNF43-202ENST00000357491 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
ZNF43-202ENST00000357491 CARMIL1Q5VZK9 1371 aa14.79□□□□□ -0.04
ZNF43-202ENST00000357491 TTBK1Q5TCY1 1321 aaPredicted RBP14.75□□□□□ -0.05
ZNF43-202ENST00000357491 DNMBPQ6XZF7 1577 aa14.74□□□□□ -0.05
ZNF43-202ENST00000357491 CLIP1P30622 1438 aa14.73□□□□□ -0.05
ZNF43-202ENST00000357491 RAPGEF2Q9Y4G8 1499 aa14.72□□□□□ -0.05
ZNF43-202ENST00000357491 CCER1Q8TC90 406 aaPredicted RBP14.69□□□□□ -0.06
ZNF43-202ENST00000357491 PLEKHD1A6NEE1 506 aa14.68□□□□□ -0.06
ZNF43-202ENST00000357491 FMN1Q68DA7 1419 aa14.68□□□□□ -0.06
ZNF43-202ENST00000357491 GRIN2BQ13224 1484 aa14.66□□□□□ -0.06
ZNF43-202ENST00000357491 ESF1Q9H501 851 aaKnown RBP14.66□□□□□ -0.06
ZNF43-202ENST00000357491 WDR97A6NE52 1622 aa14.65□□□□□ -0.06
ZNF43-202ENST00000357491 MTUS2Q5JR59 1369 aa14.64□□□□□ -0.07
ZNF43-202ENST00000357491 GAPVD1Q14C86 1478 aa14.63□□□□□ -0.07
ZNF43-202ENST00000357491 FAM50AQ14320 339 aaKnown RBP14.61□□□□□ -0.07
ZNF43-202ENST00000357491 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
ZNF43-202ENST00000357491 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
ZNF43-202ENST00000357491 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
ZNF43-202ENST00000357491 ERICH3Q5RHP9 1530 aa14.56□□□□□ -0.08
ZNF43-202ENST00000357491 TOPBP1Q92547 1522 aa14.56□□□□□ -0.08
ZNF43-202ENST00000357491 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
ZNF43-202ENST00000357491 TSPY4P0CV99 314 aa14.55□□□□□ -0.08
ZNF43-202ENST00000357491 TSPY10P0CW01 314 aa14.55□□□□□ -0.08
ZNF43-202ENST00000357491 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
ZNF43-202ENST00000357491 LOC105371045A0A1W2PR82 267 aa14.54□□□□□ -0.08
ZNF43-202ENST00000357491 CUL7Q14999 1698 aa14.54□□□□□ -0.08
ZNF43-202ENST00000357491 PRDM2Q13029 1718 aa14.53□□□□□ -0.08
ZNF43-202ENST00000357491 PCGF6Q9BYE7 350 aa14.52□□□□□ -0.08
ZNF43-202ENST00000357491 MAGI1Q96QZ7 1491 aaPredicted RBP14.5□□□□□ -0.09
ZNF43-202ENST00000357491 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
ZNF43-202ENST00000357491 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
ZNF43-202ENST00000357491 EFCAB5A4FU69 1503 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms