RNA–Protein interactions for RNA: ENST00000355654.6

TMEM18-202, Transcript of transmembrane protein 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM18, Length 2,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM18-202ENST00000355654 AEBP2Q6ZN18 517 aaPredicted RBP25.63■■□□□ 1.69
TMEM18-202ENST00000355654 NISCHQ9Y2I1 1504 aa25.33■■□□□ 1.65
TMEM18-202ENST00000355654 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
TMEM18-202ENST00000355654 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
TMEM18-202ENST00000355654 CCDC180Q9P1Z9 1646 aa21.62■■□□□ 1.05
TMEM18-202ENST00000355654 PHF23Q9BUL5 403 aaPredicted RBP21.55■■□□□ 1.04
TMEM18-202ENST00000355654 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
TMEM18-202ENST00000355654 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
TMEM18-202ENST00000355654 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
TMEM18-202ENST00000355654 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
TMEM18-202ENST00000355654 DCAF1Q9Y4B6 1507 aa20.74■□□□□ 0.91
TMEM18-202ENST00000355654 FOXD1Q16676 465 aa20.32■□□□□ 0.84
TMEM18-202ENST00000355654 SCRIBQ14160 1630 aa20.3■□□□□ 0.84
TMEM18-202ENST00000355654 ABCC9O60706 1549 aa20.29■□□□□ 0.84
TMEM18-202ENST00000355654 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
TMEM18-202ENST00000355654 NACADO15069 1562 aa20.04■□□□□ 0.8
TMEM18-202ENST00000355654 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
TMEM18-202ENST00000355654 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
TMEM18-202ENST00000355654 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
TMEM18-202ENST00000355654 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
TMEM18-202ENST00000355654 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
TMEM18-202ENST00000355654 PLPPR3Q6T4P5 718 aa19.65■□□□□ 0.74
TMEM18-202ENST00000355654 WIZO95785 1651 aa19.6■□□□□ 0.73
TMEM18-202ENST00000355654 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
TMEM18-202ENST00000355654 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
TMEM18-202ENST00000355654 BAZ1AQ9NRL2 1556 aaPredicted RBP19.46■□□□□ 0.71
TMEM18-202ENST00000355654 PCGF6Q9BYE7 350 aa19.39■□□□□ 0.69
TMEM18-202ENST00000355654 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
TMEM18-202ENST00000355654 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
TMEM18-202ENST00000355654 SMARCA4P51532 1647 aa19.35■□□□□ 0.69
TMEM18-202ENST00000355654 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
TMEM18-202ENST00000355654 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
TMEM18-202ENST00000355654 TOP2AP11388 1531 aaKnown RBP19.26■□□□□ 0.67
TMEM18-202ENST00000355654 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
TMEM18-202ENST00000355654 CCDC88BA6NC98 1476 aa19.18■□□□□ 0.66
TMEM18-202ENST00000355654 HRCP23327 699 aa19.18■□□□□ 0.66
TMEM18-202ENST00000355654 PPP6R1Q9UPN7 881 aa19.18■□□□□ 0.66
TMEM18-202ENST00000355654 SMARCA2P51531 1590 aa19.16■□□□□ 0.66
TMEM18-202ENST00000355654 ADRA2BP18089 450 aa19.13■□□□□ 0.65
TMEM18-202ENST00000355654 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
TMEM18-202ENST00000355654 PIAS4Q8N2W9 510 aaPredicted RBP19.05■□□□□ 0.64
TMEM18-202ENST00000355654 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.64
TMEM18-202ENST00000355654 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
TMEM18-202ENST00000355654 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
TMEM18-202ENST00000355654 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
TMEM18-202ENST00000355654 MSH5O43196 834 aa18.89■□□□□ 0.61
TMEM18-202ENST00000355654 SOGA1O94964 1423 aa18.86■□□□□ 0.61
TMEM18-202ENST00000355654 BAZ1BQ9UIG0 1483 aaKnown RBP18.85■□□□□ 0.61
TMEM18-202ENST00000355654 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
TMEM18-202ENST00000355654 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
TMEM18-202ENST00000355654 SYNJ1O43426 1573 aa18.71■□□□□ 0.59
TMEM18-202ENST00000355654 CSRNP3Q8WYN3 585 aa18.68■□□□□ 0.58
TMEM18-202ENST00000355654 CEP162Q5TB80 1403 aa18.65■□□□□ 0.58
TMEM18-202ENST00000355654 EEA1Q15075 1411 aa18.63■□□□□ 0.57
TMEM18-202ENST00000355654 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
TMEM18-202ENST00000355654 TNIKQ9UKE5 1360 aa18.59■□□□□ 0.57
TMEM18-202ENST00000355654 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.57
TMEM18-202ENST00000355654 NCAPD3P42695 1498 aa18.55■□□□□ 0.56
TMEM18-202ENST00000355654 GOLGA3Q08378 1498 aa18.54■□□□□ 0.56
TMEM18-202ENST00000355654 HMGXB3Q12766 1538 aa18.54■□□□□ 0.56
TMEM18-202ENST00000355654 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
TMEM18-202ENST00000355654 CEP164Q9UPV0 1460 aa18.46■□□□□ 0.54
TMEM18-202ENST00000355654 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
TMEM18-202ENST00000355654 KIF21BO75037 1637 aa18.43■□□□□ 0.54
TMEM18-202ENST00000355654 RAPGEF2Q9Y4G8 1499 aa18.41■□□□□ 0.54
TMEM18-202ENST00000355654 BIVM-ERCC5R4GMW8 1640 aa18.39■□□□□ 0.54
TMEM18-202ENST00000355654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
TMEM18-202ENST00000355654 RANGAP1P46060 587 aaPredicted RBP18.38■□□□□ 0.53
TMEM18-202ENST00000355654 CUX1P39880 1505 aa18.36■□□□□ 0.53
TMEM18-202ENST00000355654 CFTRP13569 1480 aa18.36■□□□□ 0.53
TMEM18-202ENST00000355654 CLIP1P30622 1438 aa18.34■□□□□ 0.53
TMEM18-202ENST00000355654 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
TMEM18-202ENST00000355654 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
TMEM18-202ENST00000355654 VPS8Q8N3P4 1428 aa18.22■□□□□ 0.51
TMEM18-202ENST00000355654 PRXQ9BXM0 1461 aa18.22■□□□□ 0.51
TMEM18-202ENST00000355654 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
TMEM18-202ENST00000355654 PRDM2Q13029 1718 aa18.19■□□□□ 0.5
TMEM18-202ENST00000355654 KIF27Q86VH2 1401 aa18.19■□□□□ 0.5
TMEM18-202ENST00000355654 ERICH3Q5RHP9 1530 aa18.17■□□□□ 0.5
TMEM18-202ENST00000355654 POTEDQ86YR6 584 aa18.14■□□□□ 0.49
TMEM18-202ENST00000355654 APLP2Q06481 763 aa18.11■□□□□ 0.49
TMEM18-202ENST00000355654 CUX2O14529 1486 aa18.09■□□□□ 0.49
TMEM18-202ENST00000355654 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
TMEM18-202ENST00000355654 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
TMEM18-202ENST00000355654 FGD5Q6ZNL6 1462 aa18.07■□□□□ 0.48
TMEM18-202ENST00000355654 FANCD2Q9BXW9 1451 aa18.04■□□□□ 0.48
TMEM18-202ENST00000355654 NESP48681 1621 aa18.03■□□□□ 0.48
TMEM18-202ENST00000355654 IGF1RP08069 1367 aa18.02■□□□□ 0.48
TMEM18-202ENST00000355654 KANK4Q5T7N3 995 aaPredicted RBP17.97■□□□□ 0.47
TMEM18-202ENST00000355654 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
TMEM18-202ENST00000355654 CARMIL1Q5VZK9 1371 aa17.94■□□□□ 0.46
TMEM18-202ENST00000355654 RAD54L2Q9Y4B4 1467 aa17.94■□□□□ 0.46
TMEM18-202ENST00000355654 DNAJC5BQ9UF47 199 aa17.93■□□□□ 0.46
TMEM18-202ENST00000355654 DNMBPQ6XZF7 1577 aa17.9■□□□□ 0.46
TMEM18-202ENST00000355654 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
TMEM18-202ENST00000355654 POLA1P09884 1462 aaPredicted RBP17.89■□□□□ 0.45
TMEM18-202ENST00000355654 ABCA10Q8WWZ4 1543 aa17.82■□□□□ 0.44
TMEM18-202ENST00000355654 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
TMEM18-202ENST00000355654 P3H3Q8IVL6 736 aa17.8■□□□□ 0.44
TMEM18-202ENST00000355654 LAMC3Q9Y6N6 1575 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms