RNA–Protein interactions for RNA: ENST00000355632.8

ZNF397-203, Transcript of zinc finger protein 397, humanhuman

TSL 5 BASIC

Gene ZNF397, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-203ENST00000355632 NISCHQ9Y2I1 1504 aa22.74■■□□□ 1.23
ZNF397-203ENST00000355632 ABCC9O60706 1549 aa19.82■□□□□ 0.76
ZNF397-203ENST00000355632 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
ZNF397-203ENST00000355632 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.65
ZNF397-203ENST00000355632 DCAF8L2P0C7V8 631 aa18.82■□□□□ 0.6
ZNF397-203ENST00000355632 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
ZNF397-203ENST00000355632 SHROOM4Q9ULL8 1493 aa18.76■□□□□ 0.59
ZNF397-203ENST00000355632 DCAF1Q9Y4B6 1507 aa18.75■□□□□ 0.59
ZNF397-203ENST00000355632 NACADO15069 1562 aa18.65■□□□□ 0.58
ZNF397-203ENST00000355632 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
ZNF397-203ENST00000355632 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
ZNF397-203ENST00000355632 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
ZNF397-203ENST00000355632 UNC13AQ9UPW8 1703 aa18.3■□□□□ 0.52
ZNF397-203ENST00000355632 SCRIBQ14160 1630 aa18.25■□□□□ 0.51
ZNF397-203ENST00000355632 BICRAQ9NZM4 1560 aa18.19■□□□□ 0.5
ZNF397-203ENST00000355632 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
ZNF397-203ENST00000355632 CECR2Q9BXF3 1484 aa17.86■□□□□ 0.45
ZNF397-203ENST00000355632 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
ZNF397-203ENST00000355632 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
ZNF397-203ENST00000355632 RSF1Q96T23 1441 aaPredicted RBP17.72■□□□□ 0.43
ZNF397-203ENST00000355632 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
ZNF397-203ENST00000355632 BAZ1AQ9NRL2 1556 aaPredicted RBP17.54■□□□□ 0.4
ZNF397-203ENST00000355632 WIZO95785 1651 aa17.49■□□□□ 0.39
ZNF397-203ENST00000355632 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
ZNF397-203ENST00000355632 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
ZNF397-203ENST00000355632 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
ZNF397-203ENST00000355632 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
ZNF397-203ENST00000355632 PEG3Q9GZU2 1588 aa17.21■□□□□ 0.35
ZNF397-203ENST00000355632 DNAJC5Q9H3Z4 198 aa17.18■□□□□ 0.34
ZNF397-203ENST00000355632 ERCC6Q03468 1493 aa17.16■□□□□ 0.34
ZNF397-203ENST00000355632 ATAD2BQ9ULI0 1458 aa17.15■□□□□ 0.34
ZNF397-203ENST00000355632 SMARCA2P51531 1590 aa17.13■□□□□ 0.33
ZNF397-203ENST00000355632 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
ZNF397-203ENST00000355632 CUX2O14529 1486 aa17.09■□□□□ 0.33
ZNF397-203ENST00000355632 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
ZNF397-203ENST00000355632 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
ZNF397-203ENST00000355632 NESP48681 1621 aa16.97■□□□□ 0.31
ZNF397-203ENST00000355632 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
ZNF397-203ENST00000355632 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
ZNF397-203ENST00000355632 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
ZNF397-203ENST00000355632 PDS5BQ9NTI5 1447 aa16.81■□□□□ 0.28
ZNF397-203ENST00000355632 THOC2Q8NI27 1593 aaKnown RBP16.77■□□□□ 0.27
ZNF397-203ENST00000355632 LOC105371045A0A1W2PR82 267 aa16.76■□□□□ 0.27
ZNF397-203ENST00000355632 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
ZNF397-203ENST00000355632 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
ZNF397-203ENST00000355632 KIF21AQ7Z4S6 1674 aa16.72■□□□□ 0.27
ZNF397-203ENST00000355632 WRNQ14191 1432 aaPredicted RBP eCLIP16.67■□□□□ 0.26
ZNF397-203ENST00000355632 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
ZNF397-203ENST00000355632 CFTRP13569 1480 aa16.62■□□□□ 0.25
ZNF397-203ENST00000355632 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
ZNF397-203ENST00000355632 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
ZNF397-203ENST00000355632 WDR62O43379 1518 aa16.55■□□□□ 0.24
ZNF397-203ENST00000355632 SOGA1O94964 1423 aa16.55■□□□□ 0.24
ZNF397-203ENST00000355632 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
ZNF397-203ENST00000355632 FANCD2Q9BXW9 1451 aa16.53■□□□□ 0.24
ZNF397-203ENST00000355632 PRDM2Q13029 1718 aa16.52■□□□□ 0.24
ZNF397-203ENST00000355632 TOP2BQ02880 1626 aa16.51■□□□□ 0.23
ZNF397-203ENST00000355632 RUSC2Q8N2Y8 1516 aa16.49■□□□□ 0.23
ZNF397-203ENST00000355632 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
ZNF397-203ENST00000355632 EEA1Q15075 1411 aa16.45■□□□□ 0.22
ZNF397-203ENST00000355632 CUX1P39880 1505 aa16.45■□□□□ 0.22
ZNF397-203ENST00000355632 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
ZNF397-203ENST00000355632 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
ZNF397-203ENST00000355632 URB2Q14146 1524 aaKnown RBP16.36■□□□□ 0.21
ZNF397-203ENST00000355632 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
ZNF397-203ENST00000355632 KIF21BO75037 1637 aa16.26■□□□□ 0.19
ZNF397-203ENST00000355632 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
ZNF397-203ENST00000355632 TNIKQ9UKE5 1360 aa16.24■□□□□ 0.19
ZNF397-203ENST00000355632 UBTFP17480 764 aaKnown RBP16.24■□□□□ 0.19
ZNF397-203ENST00000355632 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
ZNF397-203ENST00000355632 DNMBPQ6XZF7 1577 aa16.22■□□□□ 0.19
ZNF397-203ENST00000355632 KIF27Q86VH2 1401 aa16.22■□□□□ 0.19
ZNF397-203ENST00000355632 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
ZNF397-203ENST00000355632 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
ZNF397-203ENST00000355632 TOPBP1Q92547 1522 aa16.2■□□□□ 0.18
ZNF397-203ENST00000355632 ZNF608Q9ULD9 1512 aaPredicted RBP16.18■□□□□ 0.18
ZNF397-203ENST00000355632 PRXQ9BXM0 1461 aa16.15■□□□□ 0.18
ZNF397-203ENST00000355632 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
ZNF397-203ENST00000355632 PCGF6Q9BYE7 350 aa16.14■□□□□ 0.17
ZNF397-203ENST00000355632 ERICH3Q5RHP9 1530 aa16.12■□□□□ 0.17
ZNF397-203ENST00000355632 RAD54L2Q9Y4B4 1467 aa16.12■□□□□ 0.17
ZNF397-203ENST00000355632 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
ZNF397-203ENST00000355632 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
ZNF397-203ENST00000355632 FBLN2P98095 1184 aa16.07■□□□□ 0.16
ZNF397-203ENST00000355632 IGF1RP08069 1367 aa16.07■□□□□ 0.16
ZNF397-203ENST00000355632 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
ZNF397-203ENST00000355632 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
ZNF397-203ENST00000355632 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
ZNF397-203ENST00000355632 AQRO60306 1485 aaKnown RBP eCLIP16.06■□□□□ 0.168e-7■■■■■ 28.7
ZNF397-203ENST00000355632 CLIP1P30622 1438 aa16.04■□□□□ 0.16
ZNF397-203ENST00000355632 TRIM26Q12899 539 aaPredicted RBP16.04■□□□□ 0.16
ZNF397-203ENST00000355632 ARHGEF11O15085 1522 aa16.03■□□□□ 0.16
ZNF397-203ENST00000355632 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
ZNF397-203ENST00000355632 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
ZNF397-203ENST00000355632 CYB5RLQ6IPT4 315 aa16■□□□□ 0.15
ZNF397-203ENST00000355632 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
ZNF397-203ENST00000355632 CARMIL1Q5VZK9 1371 aa15.99■□□□□ 0.15
ZNF397-203ENST00000355632 PPARGC1BQ86YN6 1023 aaKnown RBP15.99■□□□□ 0.15
ZNF397-203ENST00000355632 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
ZNF397-203ENST00000355632 CHD1O14646 1710 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms