RNA–Protein interactions for RNA: ENST00000342757.2

LINC00319-201, long intergenic non-protein coding RNA 319, humanhuman

TSL 2

Gene LINC00319, Length 3,004 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00319-201ENST00000342757 NISCHQ9Y2I1 1504 aa30.84■■■□□ 2.53
LINC00319-201ENST00000342757 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
LINC00319-201ENST00000342757 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
LINC00319-201ENST00000342757 DCAF8L2P0C7V8 631 aa25.64■■□□□ 1.69
LINC00319-201ENST00000342757 SHROOM4Q9ULL8 1493 aa25.58■■□□□ 1.68
LINC00319-201ENST00000342757 ABCC9O60706 1549 aa25.48■■□□□ 1.67
LINC00319-201ENST00000342757 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
LINC00319-201ENST00000342757 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
LINC00319-201ENST00000342757 MYO15BQ96JP2 1530 aa25.04■■□□□ 1.6
LINC00319-201ENST00000342757 NACADO15069 1562 aa24.96■■□□□ 1.59
LINC00319-201ENST00000342757 HRCP23327 699 aa24.92■■□□□ 1.58
LINC00319-201ENST00000342757 SCRIBQ14160 1630 aa24.84■■□□□ 1.57
LINC00319-201ENST00000342757 PCGF6Q9BYE7 350 aa24.8■■□□□ 1.56
LINC00319-201ENST00000342757 RB1CC1Q8TDY2 1594 aa24.77■■□□□ 1.56
LINC00319-201ENST00000342757 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
LINC00319-201ENST00000342757 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.53
LINC00319-201ENST00000342757 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
LINC00319-201ENST00000342757 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
LINC00319-201ENST00000342757 PABPN1Q86U42 306 aaKnown RBP eCLIP24.06■■□□□ 1.44
LINC00319-201ENST00000342757 BICRAQ9NZM4 1560 aa24.06■■□□□ 1.44
LINC00319-201ENST00000342757 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
LINC00319-201ENST00000342757 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
LINC00319-201ENST00000342757 MROH2BQ7Z745 1585 aa23.89■■□□□ 1.41
LINC00319-201ENST00000342757 TRIM26Q12899 539 aaPredicted RBP23.83■■□□□ 1.41
LINC00319-201ENST00000342757 BAZ1AQ9NRL2 1556 aaPredicted RBP23.81■■□□□ 1.4
LINC00319-201ENST00000342757 WIZO95785 1651 aa23.73■■□□□ 1.39
LINC00319-201ENST00000342757 SMARCA4P51532 1647 aa23.72■■□□□ 1.39
LINC00319-201ENST00000342757 EHMT2Q96KQ7 1210 aa23.64■■□□□ 1.38
LINC00319-201ENST00000342757 FAM9AQ8IZU1 332 aaPredicted RBP23.55■■□□□ 1.36
LINC00319-201ENST00000342757 SCAF1Q9H7N4 1312 aaKnown RBP23.53■■□□□ 1.36
LINC00319-201ENST00000342757 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
LINC00319-201ENST00000342757 ZEB1P37275 1124 aaPredicted RBP23.4■■□□□ 1.34
LINC00319-201ENST00000342757 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
LINC00319-201ENST00000342757 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
LINC00319-201ENST00000342757 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
LINC00319-201ENST00000342757 TRIM41Q8WV44 630 aa23.34■■□□□ 1.33
LINC00319-201ENST00000342757 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
LINC00319-201ENST00000342757 SMARCA2P51531 1590 aa23.26■■□□□ 1.31
LINC00319-201ENST00000342757 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
LINC00319-201ENST00000342757 CCDC88BA6NC98 1476 aa23.19■■□□□ 1.3
LINC00319-201ENST00000342757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.1■■□□□ 1.29
LINC00319-201ENST00000342757 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
LINC00319-201ENST00000342757 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
LINC00319-201ENST00000342757 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
LINC00319-201ENST00000342757 CC2D2AQ9P2K1 1620 aa23.01■■□□□ 1.27
LINC00319-201ENST00000342757 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
LINC00319-201ENST00000342757 CCER1Q8TC90 406 aaPredicted RBP22.97■■□□□ 1.27
LINC00319-201ENST00000342757 ACIN1Q9UKV3 1341 aaKnown RBP22.96■■□□□ 1.27
LINC00319-201ENST00000342757 GTF3C3Q9Y5Q9 886 aa22.88■■□□□ 1.25
LINC00319-201ENST00000342757 ABCC8Q09428 1581 aa22.81■■□□□ 1.24
LINC00319-201ENST00000342757 DIEXFQ68CQ4 756 aaKnown RBP22.79■■□□□ 1.24
LINC00319-201ENST00000342757 CENPBP07199 599 aaPredicted RBP22.67■■□□□ 1.22
LINC00319-201ENST00000342757 YTHDC1Q96MU7 727 aaKnown RBP22.63■■□□□ 1.21
LINC00319-201ENST00000342757 WRNQ14191 1432 aaPredicted RBP eCLIP22.57■■□□□ 1.2
LINC00319-201ENST00000342757 CFTRP13569 1480 aa22.57■■□□□ 1.2
LINC00319-201ENST00000342757 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
LINC00319-201ENST00000342757 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
LINC00319-201ENST00000342757 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
LINC00319-201ENST00000342757 PRDM2Q13029 1718 aa22.47■■□□□ 1.19
LINC00319-201ENST00000342757 NESP48681 1621 aa22.39■■□□□ 1.17
LINC00319-201ENST00000342757 SOGA1O94964 1423 aa22.36■■□□□ 1.17
LINC00319-201ENST00000342757 TOP2BQ02880 1626 aa22.36■■□□□ 1.17
LINC00319-201ENST00000342757 ZNF316A6NFI3 1004 aaPredicted RBP22.35■■□□□ 1.17
LINC00319-201ENST00000342757 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.16
LINC00319-201ENST00000342757 CUX1P39880 1505 aa22.32■■□□□ 1.16
LINC00319-201ENST00000342757 MIER1Q8N108 512 aa22.29■■□□□ 1.16
LINC00319-201ENST00000342757 FANCD2Q9BXW9 1451 aa22.29■■□□□ 1.16
LINC00319-201ENST00000342757 RUSC2Q8N2Y8 1516 aa22.29■■□□□ 1.16
LINC00319-201ENST00000342757 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.16
LINC00319-201ENST00000342757 UBTFP17480 764 aaKnown RBP22.25■■□□□ 1.15
LINC00319-201ENST00000342757 MYT1Q01538 1121 aa22.25■■□□□ 1.15
LINC00319-201ENST00000342757 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
LINC00319-201ENST00000342757 CEP162Q5TB80 1403 aa22.22■■□□□ 1.15
LINC00319-201ENST00000342757 EEA1Q15075 1411 aa22.19■■□□□ 1.14
LINC00319-201ENST00000342757 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
LINC00319-201ENST00000342757 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
LINC00319-201ENST00000342757 PDS5BQ9NTI5 1447 aa22.1■■□□□ 1.13
LINC00319-201ENST00000342757 KIF21AQ7Z4S6 1674 aa22.1■■□□□ 1.13
LINC00319-201ENST00000342757 FGD5Q6ZNL6 1462 aa22.08■■□□□ 1.13
LINC00319-201ENST00000342757 DNMBPQ6XZF7 1577 aa22.07■■□□□ 1.12
LINC00319-201ENST00000342757 TOPBP1Q92547 1522 aa22.05■■□□□ 1.12
LINC00319-201ENST00000342757 RANGAP1P46060 587 aaPredicted RBP22.04■■□□□ 1.12
LINC00319-201ENST00000342757 URB2Q14146 1524 aaKnown RBP22.01■■□□□ 1.11
LINC00319-201ENST00000342757 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
LINC00319-201ENST00000342757 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
LINC00319-201ENST00000342757 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
LINC00319-201ENST00000342757 CUX2O14529 1486 aa21.96■■□□□ 1.11
LINC00319-201ENST00000342757 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
LINC00319-201ENST00000342757 KIF21BO75037 1637 aa21.95■■□□□ 1.1
LINC00319-201ENST00000342757 RAD54L2Q9Y4B4 1467 aa21.93■■□□□ 1.1
LINC00319-201ENST00000342757 RAPGEF2Q9Y4G8 1499 aa21.9■■□□□ 1.1
LINC00319-201ENST00000342757 MRC2Q9UBG0 1479 aa21.84■■□□□ 1.09
LINC00319-201ENST00000342757 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
LINC00319-201ENST00000342757 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
LINC00319-201ENST00000342757 ABCA10Q8WWZ4 1543 aa21.82■■□□□ 1.08
LINC00319-201ENST00000342757 APLP2Q06481 763 aa21.78■■□□□ 1.08
LINC00319-201ENST00000342757 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
LINC00319-201ENST00000342757 WDR97A6NE52 1622 aa21.78■■□□□ 1.08
LINC00319-201ENST00000342757 IGF1RP08069 1367 aa21.77■■□□□ 1.07
LINC00319-201ENST00000342757 SUPT16HQ9Y5B9 1047 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms