RNA–Protein interactions for RNA: ENST00000340160.7

TSPAN18-201, Transcript of tetraspanin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN18, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-201ENST00000340160 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
TSPAN18-201ENST00000340160 DCAF8L2P0C7V8 631 aa18.29■□□□□ 0.52
TSPAN18-201ENST00000340160 ABCC9O60706 1549 aa17.43■□□□□ 0.38
TSPAN18-201ENST00000340160 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
TSPAN18-201ENST00000340160 SHROOM4Q9ULL8 1493 aa17.14■□□□□ 0.33
TSPAN18-201ENST00000340160 ZCCHC6Q5VYS8 1495 aaKnown RBP16.76■□□□□ 0.27
TSPAN18-201ENST00000340160 SUPT5HO00267 1087 aaKnown RBP16.72■□□□□ 0.27
TSPAN18-201ENST00000340160 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
TSPAN18-201ENST00000340160 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
TSPAN18-201ENST00000340160 NACADO15069 1562 aa16.62■□□□□ 0.25
TSPAN18-201ENST00000340160 DCAF1Q9Y4B6 1507 aa16.46■□□□□ 0.22
TSPAN18-201ENST00000340160 SCRIBQ14160 1630 aa16.39■□□□□ 0.22
TSPAN18-201ENST00000340160 MYO15BQ96JP2 1530 aa16.34■□□□□ 0.21
TSPAN18-201ENST00000340160 BAZ1AQ9NRL2 1556 aaPredicted RBP15.77■□□□□ 0.11
TSPAN18-201ENST00000340160 TRIM41Q8WV44 630 aa15.73■□□□□ 0.11
TSPAN18-201ENST00000340160 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
TSPAN18-201ENST00000340160 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
TSPAN18-201ENST00000340160 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
TSPAN18-201ENST00000340160 SMARCA2P51531 1590 aa15.58■□□□□ 0.09
TSPAN18-201ENST00000340160 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
TSPAN18-201ENST00000340160 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
TSPAN18-201ENST00000340160 EHMT2Q96KQ7 1210 aa15.52■□□□□ 0.08
TSPAN18-201ENST00000340160 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
TSPAN18-201ENST00000340160 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
TSPAN18-201ENST00000340160 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
TSPAN18-201ENST00000340160 SMARCA4P51532 1647 aa15.45■□□□□ 0.06
TSPAN18-201ENST00000340160 UNC13AQ9UPW8 1703 aa15.37■□□□□ 0.05
TSPAN18-201ENST00000340160 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
TSPAN18-201ENST00000340160 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
TSPAN18-201ENST00000340160 CHIC1Q5VXU3 224 aa15.33■□□□□ 0.04
TSPAN18-201ENST00000340160 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
TSPAN18-201ENST00000340160 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
TSPAN18-201ENST00000340160 WIZO95785 1651 aa15.29■□□□□ 0.04
TSPAN18-201ENST00000340160 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
TSPAN18-201ENST00000340160 PDS5BQ9NTI5 1447 aa15.28■□□□□ 0.04
TSPAN18-201ENST00000340160 DNAJC5BQ9UF47 199 aa15.28■□□□□ 0.04
TSPAN18-201ENST00000340160 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
TSPAN18-201ENST00000340160 APLP2Q06481 763 aa15.25■□□□□ 0.03
TSPAN18-201ENST00000340160 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
TSPAN18-201ENST00000340160 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
TSPAN18-201ENST00000340160 FBLN2P98095 1184 aa15.21■□□□□ 0.03
TSPAN18-201ENST00000340160 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
TSPAN18-201ENST00000340160 HRCP23327 699 aa15.19■□□□□ 0.02
TSPAN18-201ENST00000340160 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
TSPAN18-201ENST00000340160 ATP1B4Q9UN42 357 aaPredicted RBP15.11■□□□□ 0.01
TSPAN18-201ENST00000340160 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.016e-7■■■■■ 33.4
TSPAN18-201ENST00000340160 CEP164Q9UPV0 1460 aa15.04■□□□□ -0
TSPAN18-201ENST00000340160 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
TSPAN18-201ENST00000340160 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
TSPAN18-201ENST00000340160 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
TSPAN18-201ENST00000340160 CHMP7Q8WUX9 453 aaPredicted RBP15□□□□□ -0.01
TSPAN18-201ENST00000340160 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
TSPAN18-201ENST00000340160 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
TSPAN18-201ENST00000340160 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
TSPAN18-201ENST00000340160 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
TSPAN18-201ENST00000340160 CFTRP13569 1480 aa14.92□□□□□ -0.02
TSPAN18-201ENST00000340160 KIF27Q86VH2 1401 aa14.91□□□□□ -0.02
TSPAN18-201ENST00000340160 NESP48681 1621 aa14.9□□□□□ -0.02
TSPAN18-201ENST00000340160 SOGA1O94964 1423 aa14.89□□□□□ -0.03
TSPAN18-201ENST00000340160 LOC105371045A0A1W2PR82 267 aa14.88□□□□□ -0.03
TSPAN18-201ENST00000340160 EEA1Q15075 1411 aa14.85□□□□□ -0.03
TSPAN18-201ENST00000340160 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
TSPAN18-201ENST00000340160 CUX2O14529 1486 aa14.83□□□□□ -0.04
TSPAN18-201ENST00000340160 MYT1Q01538 1121 aa14.83□□□□□ -0.04
TSPAN18-201ENST00000340160 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
TSPAN18-201ENST00000340160 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
TSPAN18-201ENST00000340160 P3H3Q8IVL6 736 aa14.74□□□□□ -0.05
TSPAN18-201ENST00000340160 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
TSPAN18-201ENST00000340160 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
TSPAN18-201ENST00000340160 CARMIL1Q5VZK9 1371 aa14.71□□□□□ -0.06
TSPAN18-201ENST00000340160 FGD5Q6ZNL6 1462 aa14.69□□□□□ -0.06
TSPAN18-201ENST00000340160 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
TSPAN18-201ENST00000340160 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
TSPAN18-201ENST00000340160 CDK11AQ9UQ88 783 aaPredicted RBP14.63□□□□□ -0.07
TSPAN18-201ENST00000340160 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
TSPAN18-201ENST00000340160 MYT1LQ9UL68 1186 aa14.62□□□□□ -0.07
TSPAN18-201ENST00000340160 RAD54L2Q9Y4B4 1467 aa14.62□□□□□ -0.07
TSPAN18-201ENST00000340160 GOLGA3Q08378 1498 aa14.61□□□□□ -0.07
TSPAN18-201ENST00000340160 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
TSPAN18-201ENST00000340160 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
TSPAN18-201ENST00000340160 GAPVD1Q14C86 1478 aa14.59□□□□□ -0.07
TSPAN18-201ENST00000340160 ARID3CA6NKF2 412 aa14.57□□□□□ -0.08
TSPAN18-201ENST00000340160 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.08
TSPAN18-201ENST00000340160 POLA1P09884 1462 aaPredicted RBP14.55□□□□□ -0.08
TSPAN18-201ENST00000340160 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
TSPAN18-201ENST00000340160 CUX1P39880 1505 aa14.53□□□□□ -0.08
TSPAN18-201ENST00000340160 GRIN2BQ13224 1484 aa14.52□□□□□ -0.08
TSPAN18-201ENST00000340160 URB2Q14146 1524 aaKnown RBP14.5□□□□□ -0.09
TSPAN18-201ENST00000340160 TRIM26Q12899 539 aaPredicted RBP14.5□□□□□ -0.09
TSPAN18-201ENST00000340160 RAPGEF2Q9Y4G8 1499 aa14.5□□□□□ -0.09
TSPAN18-201ENST00000340160 CARMIL2Q6F5E8 1435 aa14.5□□□□□ -0.09
TSPAN18-201ENST00000340160 CLIP1P30622 1438 aa14.49□□□□□ -0.09
TSPAN18-201ENST00000340160 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
TSPAN18-201ENST00000340160 IGF1RP08069 1367 aa14.47□□□□□ -0.09
TSPAN18-201ENST00000340160 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
TSPAN18-201ENST00000340160 TNIKQ9UKE5 1360 aa14.46□□□□□ -0.09
TSPAN18-201ENST00000340160 JPH4Q96JJ6 628 aa14.46□□□□□ -0.09
TSPAN18-201ENST00000340160 FHAD1B1AJZ9 1412 aa14.45□□□□□ -0.1
TSPAN18-201ENST00000340160 ITGAEP38570 1179 aa14.42□□□□□ -0.1
TSPAN18-201ENST00000340160 PLEKHD1A6NEE1 506 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms