RNA–Protein interactions for RNA: ENST00000337352.10

FGD3-201, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGD3, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-201ENST00000337352 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
FGD3-201ENST00000337352 CCDC180Q9P1Z9 1646 aa17.9■□□□□ 0.46
FGD3-201ENST00000337352 SHROOM4Q9ULL8 1493 aa17.71■□□□□ 0.43
FGD3-201ENST00000337352 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
FGD3-201ENST00000337352 DCAF8L2P0C7V8 631 aa17.52■□□□□ 0.4
FGD3-201ENST00000337352 SUPT5HO00267 1087 aaKnown RBP17.36■□□□□ 0.37
FGD3-201ENST00000337352 DCAF1Q9Y4B6 1507 aa17.11■□□□□ 0.33
FGD3-201ENST00000337352 ABCC9O60706 1549 aa16.87■□□□□ 0.29
FGD3-201ENST00000337352 SCRIBQ14160 1630 aa16.79■□□□□ 0.28
FGD3-201ENST00000337352 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
FGD3-201ENST00000337352 NACADO15069 1562 aa16.61■□□□□ 0.25
FGD3-201ENST00000337352 CHIC1Q5VXU3 224 aa16.58■□□□□ 0.25
FGD3-201ENST00000337352 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
FGD3-201ENST00000337352 PPARGC1BQ86YN6 1023 aaKnown RBP16.47■□□□□ 0.23
FGD3-201ENST00000337352 LOC105371045A0A1W2PR82 267 aa16.47■□□□□ 0.23
FGD3-201ENST00000337352 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
FGD3-201ENST00000337352 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
FGD3-201ENST00000337352 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
FGD3-201ENST00000337352 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
FGD3-201ENST00000337352 HRCP23327 699 aa16.32■□□□□ 0.2
FGD3-201ENST00000337352 MROH2BQ7Z745 1585 aa16.25■□□□□ 0.19
FGD3-201ENST00000337352 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
FGD3-201ENST00000337352 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
FGD3-201ENST00000337352 WIZO95785 1651 aa16.17■□□□□ 0.18
FGD3-201ENST00000337352 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
FGD3-201ENST00000337352 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.17
FGD3-201ENST00000337352 TRIM41Q8WV44 630 aa16.06■□□□□ 0.16
FGD3-201ENST00000337352 SMARCA4P51532 1647 aa15.99■□□□□ 0.15
FGD3-201ENST00000337352 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
FGD3-201ENST00000337352 TOP2AP11388 1531 aaKnown RBP15.89■□□□□ 0.13
FGD3-201ENST00000337352 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
FGD3-201ENST00000337352 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
FGD3-201ENST00000337352 SMARCA2P51531 1590 aa15.8■□□□□ 0.12
FGD3-201ENST00000337352 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
FGD3-201ENST00000337352 EIF4G1Q04637 1599 aaKnown RBP15.78■□□□□ 0.12
FGD3-201ENST00000337352 ABCC8Q09428 1581 aa15.72■□□□□ 0.11
FGD3-201ENST00000337352 PEG3Q9GZU2 1588 aa15.65■□□□□ 0.1
FGD3-201ENST00000337352 ATAD2BQ9ULI0 1458 aa15.63■□□□□ 0.09
FGD3-201ENST00000337352 BAZ1BQ9UIG0 1483 aaKnown RBP15.61■□□□□ 0.09
FGD3-201ENST00000337352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.55■□□□□ 0.08
FGD3-201ENST00000337352 SOGA1O94964 1423 aa15.5■□□□□ 0.07
FGD3-201ENST00000337352 WRNQ14191 1432 aaPredicted RBP eCLIP15.47■□□□□ 0.07
FGD3-201ENST00000337352 RUSC2Q8N2Y8 1516 aa15.44■□□□□ 0.06
FGD3-201ENST00000337352 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
FGD3-201ENST00000337352 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
FGD3-201ENST00000337352 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
FGD3-201ENST00000337352 CCER1Q8TC90 406 aaPredicted RBP15.37■□□□□ 0.05
FGD3-201ENST00000337352 UBTFP17480 764 aaKnown RBP15.36■□□□□ 0.05
FGD3-201ENST00000337352 NCAPD3P42695 1498 aa15.35■□□□□ 0.05
FGD3-201ENST00000337352 EEA1Q15075 1411 aa15.35■□□□□ 0.05
FGD3-201ENST00000337352 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
FGD3-201ENST00000337352 HMGXB3Q12766 1538 aa15.34■□□□□ 0.05
FGD3-201ENST00000337352 RANGAP1P46060 587 aaPredicted RBP15.34■□□□□ 0.05
FGD3-201ENST00000337352 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
FGD3-201ENST00000337352 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
FGD3-201ENST00000337352 TNIKQ9UKE5 1360 aa15.27■□□□□ 0.04
FGD3-201ENST00000337352 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
FGD3-201ENST00000337352 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
FGD3-201ENST00000337352 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
FGD3-201ENST00000337352 BIVM-ERCC5R4GMW8 1640 aa15.17■□□□□ 0.02
FGD3-201ENST00000337352 CFTRP13569 1480 aa15.16■□□□□ 0.02
FGD3-201ENST00000337352 CC2D2AQ9P2K1 1620 aa15.16■□□□□ 0.02
FGD3-201ENST00000337352 KIF21BO75037 1637 aa15.16■□□□□ 0.02
FGD3-201ENST00000337352 CUX1P39880 1505 aa15.14■□□□□ 0.01
FGD3-201ENST00000337352 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
FGD3-201ENST00000337352 YTHDC1Q96MU7 727 aaKnown RBP15.14■□□□□ 0.01
FGD3-201ENST00000337352 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
FGD3-201ENST00000337352 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
FGD3-201ENST00000337352 CLIP1P30622 1438 aa15.09■□□□□ 0.01
FGD3-201ENST00000337352 DIEXFQ68CQ4 756 aaKnown RBP15.08■□□□□ 0
FGD3-201ENST00000337352 PRDM2Q13029 1718 aa15.07■□□□□ 0
FGD3-201ENST00000337352 CADPSQ9ULU8 1353 aa15.07■□□□□ 0
FGD3-201ENST00000337352 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
FGD3-201ENST00000337352 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
FGD3-201ENST00000337352 PRXQ9BXM0 1461 aa14.98□□□□□ -0.01
FGD3-201ENST00000337352 ACIN1Q9UKV3 1341 aaKnown RBP14.98□□□□□ -0.01
FGD3-201ENST00000337352 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
FGD3-201ENST00000337352 ERICH3Q5RHP9 1530 aa14.96□□□□□ -0.01
FGD3-201ENST00000337352 APLP2Q06481 763 aa14.96□□□□□ -0.01
FGD3-201ENST00000337352 CUX2O14529 1486 aa14.95□□□□□ -0.02
FGD3-201ENST00000337352 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
FGD3-201ENST00000337352 NESP48681 1621 aa14.94□□□□□ -0.02
FGD3-201ENST00000337352 FGD5Q6ZNL6 1462 aa14.93□□□□□ -0.02
FGD3-201ENST00000337352 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
FGD3-201ENST00000337352 IGF1RP08069 1367 aa14.86□□□□□ -0.03
FGD3-201ENST00000337352 ARAP1Q96P48 1450 aa14.85□□□□□ -0.03
FGD3-201ENST00000337352 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
FGD3-201ENST00000337352 MIER1Q8N108 512 aa14.83□□□□□ -0.04
FGD3-201ENST00000337352 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
FGD3-201ENST00000337352 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
FGD3-201ENST00000337352 CARMIL1Q5VZK9 1371 aa14.81□□□□□ -0.04
FGD3-201ENST00000337352 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
FGD3-201ENST00000337352 ZNF316A6NFI3 1004 aaPredicted RBP14.79□□□□□ -0.04
FGD3-201ENST00000337352 ITGAEP38570 1179 aa14.79□□□□□ -0.04
FGD3-201ENST00000337352 POLA1P09884 1462 aaPredicted RBP14.78□□□□□ -0.04
FGD3-201ENST00000337352 ARHGAP35Q9NRY4 1499 aa14.77□□□□□ -0.04
FGD3-201ENST00000337352 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.05
FGD3-201ENST00000337352 MYT1Q01538 1121 aa14.76□□□□□ -0.05
FGD3-201ENST00000337352 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
FGD3-201ENST00000337352 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms