RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
CPNE8-201ENST00000331366 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
CPNE8-201ENST00000331366 ZCCHC6Q5VYS8 1495 aaKnown RBP16.39■□□□□ 0.21
CPNE8-201ENST00000331366 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
CPNE8-201ENST00000331366 MYO15BQ96JP2 1530 aa15.98■□□□□ 0.15
CPNE8-201ENST00000331366 ABCC9O60706 1549 aa15.56■□□□□ 0.08
CPNE8-201ENST00000331366 NACADO15069 1562 aa15.28■□□□□ 0.04
CPNE8-201ENST00000331366 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
CPNE8-201ENST00000331366 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
CPNE8-201ENST00000331366 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
CPNE8-201ENST00000331366 BAZ1AQ9NRL2 1556 aaPredicted RBP14.96□□□□□ -0.01
CPNE8-201ENST00000331366 CHIC1Q5VXU3 224 aa14.96□□□□□ -0.02
CPNE8-201ENST00000331366 RSF1Q96T23 1441 aaPredicted RBP14.94□□□□□ -0.02
CPNE8-201ENST00000331366 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
CPNE8-201ENST00000331366 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
CPNE8-201ENST00000331366 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
CPNE8-201ENST00000331366 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
CPNE8-201ENST00000331366 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
CPNE8-201ENST00000331366 MROH2BQ7Z745 1585 aa14.66□□□□□ -0.06
CPNE8-201ENST00000331366 SUPT5HO00267 1087 aaKnown RBP14.64□□□□□ -0.07
CPNE8-201ENST00000331366 HRCP23327 699 aa14.64□□□□□ -0.07
CPNE8-201ENST00000331366 WIZO95785 1651 aa14.62□□□□□ -0.07
CPNE8-201ENST00000331366 SMARCA2P51531 1590 aa14.55□□□□□ -0.08
CPNE8-201ENST00000331366 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
CPNE8-201ENST00000331366 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
CPNE8-201ENST00000331366 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
CPNE8-201ENST00000331366 EEA1Q15075 1411 aa14.41□□□□□ -0.1
CPNE8-201ENST00000331366 KIF21BO75037 1637 aa14.36□□□□□ -0.11
CPNE8-201ENST00000331366 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
CPNE8-201ENST00000331366 BIVM-ERCC5R4GMW8 1640 aa14.31□□□□□ -0.12
CPNE8-201ENST00000331366 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
CPNE8-201ENST00000331366 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
CPNE8-201ENST00000331366 HMGXB3Q12766 1538 aa14.21□□□□□ -0.13
CPNE8-201ENST00000331366 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
CPNE8-201ENST00000331366 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
CPNE8-201ENST00000331366 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
CPNE8-201ENST00000331366 TNIKQ9UKE5 1360 aa14.13□□□□□ -0.15
CPNE8-201ENST00000331366 ERICH3Q5RHP9 1530 aa14.11□□□□□ -0.15
CPNE8-201ENST00000331366 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
CPNE8-201ENST00000331366 SYNJ1O43426 1573 aa14.07□□□□□ -0.16
CPNE8-201ENST00000331366 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
CPNE8-201ENST00000331366 ABCC8Q09428 1581 aa14.04□□□□□ -0.16
CPNE8-201ENST00000331366 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
CPNE8-201ENST00000331366 TRIM41Q8WV44 630 aa14□□□□□ -0.17
CPNE8-201ENST00000331366 LOC105371045A0A1W2PR82 267 aa13.99□□□□□ -0.17
CPNE8-201ENST00000331366 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
CPNE8-201ENST00000331366 CEP164Q9UPV0 1460 aa13.98□□□□□ -0.17
CPNE8-201ENST00000331366 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
CPNE8-201ENST00000331366 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
CPNE8-201ENST00000331366 MAP3K1Q13233 1512 aa13.91□□□□□ -0.18
CPNE8-201ENST00000331366 CUX2O14529 1486 aa13.9□□□□□ -0.18
CPNE8-201ENST00000331366 PRXQ9BXM0 1461 aa13.87□□□□□ -0.19
CPNE8-201ENST00000331366 SOGA1O94964 1423 aa13.82□□□□□ -0.2
CPNE8-201ENST00000331366 CFTRP13569 1480 aa13.8□□□□□ -0.2
CPNE8-201ENST00000331366 VPS8Q8N3P4 1428 aa13.79□□□□□ -0.2
CPNE8-201ENST00000331366 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
CPNE8-201ENST00000331366 CFAP43Q8NDM7 1665 aa13.76□□□□□ -0.21
CPNE8-201ENST00000331366 RUSC2Q8N2Y8 1516 aa13.75□□□□□ -0.21
CPNE8-201ENST00000331366 CUX1P39880 1505 aa13.74□□□□□ -0.21
CPNE8-201ENST00000331366 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.22
CPNE8-201ENST00000331366 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
CPNE8-201ENST00000331366 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
CPNE8-201ENST00000331366 ARAP1Q96P48 1450 aa13.68□□□□□ -0.22
CPNE8-201ENST00000331366 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
CPNE8-201ENST00000331366 RRBP1Q9P2E9 1410 aaKnown RBP13.67□□□□□ -0.22
CPNE8-201ENST00000331366 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
CPNE8-201ENST00000331366 CLIP1P30622 1438 aa13.66□□□□□ -0.22
CPNE8-201ENST00000331366 PELP1Q8IZL8 1130 aaKnown RBP13.66□□□□□ -0.22
CPNE8-201ENST00000331366 CUL7Q14999 1698 aa13.64□□□□□ -0.23
CPNE8-201ENST00000331366 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
CPNE8-201ENST00000331366 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
CPNE8-201ENST00000331366 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
CPNE8-201ENST00000331366 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
CPNE8-201ENST00000331366 EFCAB5A4FU69 1503 aa13.57□□□□□ -0.24
CPNE8-201ENST00000331366 DNMBPQ6XZF7 1577 aa13.54□□□□□ -0.24
CPNE8-201ENST00000331366 TIAM1Q13009 1591 aa13.54□□□□□ -0.24
CPNE8-201ENST00000331366 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPNE8-201ENST00000331366 SAMD9Q5K651 1589 aa13.51□□□□□ -0.25
CPNE8-201ENST00000331366 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
CPNE8-201ENST00000331366 ABCA5Q8WWZ7 1642 aa13.5□□□□□ -0.25
CPNE8-201ENST00000331366 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
CPNE8-201ENST00000331366 ARHGAP35Q9NRY4 1499 aa13.48□□□□□ -0.25
CPNE8-201ENST00000331366 LAMC3Q9Y6N6 1575 aa13.46□□□□□ -0.26
CPNE8-201ENST00000331366 FYCO1Q9BQS8 1478 aa13.4□□□□□ -0.26
CPNE8-201ENST00000331366 LRRIQ1Q96JM4 1722 aa13.4□□□□□ -0.26
CPNE8-201ENST00000331366 ARHGEF11O15085 1522 aa13.4□□□□□ -0.26
CPNE8-201ENST00000331366 MYT1Q01538 1121 aa13.38□□□□□ -0.27
CPNE8-201ENST00000331366 FGD5Q6ZNL6 1462 aa13.37□□□□□ -0.27
CPNE8-201ENST00000331366 CADPSQ9ULU8 1353 aa13.36□□□□□ -0.27
CPNE8-201ENST00000331366 MAPKBP1O60336 1514 aa13.35□□□□□ -0.27
CPNE8-201ENST00000331366 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
CPNE8-201ENST00000331366 GCC2Q8IWJ2 1684 aa13.34□□□□□ -0.27
CPNE8-201ENST00000331366 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.27
CPNE8-201ENST00000331366 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
CPNE8-201ENST00000331366 IGF1RP08069 1367 aa13.31□□□□□ -0.28
CPNE8-201ENST00000331366 SNAPC4Q5SXM2 1469 aa13.31□□□□□ -0.28
CPNE8-201ENST00000331366 SCAF1Q9H7N4 1312 aaKnown RBP13.3□□□□□ -0.28
CPNE8-201ENST00000331366 TARBP1Q13395 1621 aaKnown RBP13.3□□□□□ -0.28
CPNE8-201ENST00000331366 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
CPNE8-201ENST00000331366 FAM9AQ8IZU1 332 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms