RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 NISCHQ9Y2I1 1504 aa23.44■■□□□ 1.34
IDH3A-201ENST00000299518 SHROOM4Q9ULL8 1493 aa20.36■□□□□ 0.85
IDH3A-201ENST00000299518 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
IDH3A-201ENST00000299518 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
IDH3A-201ENST00000299518 CCDC180Q9P1Z9 1646 aa19.78■□□□□ 0.76
IDH3A-201ENST00000299518 ZCCHC6Q5VYS8 1495 aaKnown RBP19.76■□□□□ 0.75
IDH3A-201ENST00000299518 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
IDH3A-201ENST00000299518 MYO15BQ96JP2 1530 aa18.99■□□□□ 0.63
IDH3A-201ENST00000299518 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
IDH3A-201ENST00000299518 ABCC9O60706 1549 aa18.94■□□□□ 0.62
IDH3A-201ENST00000299518 SCRIBQ14160 1630 aa18.9■□□□□ 0.62
IDH3A-201ENST00000299518 LOC105371045A0A1W2PR82 267 aa18.68■□□□□ 0.58
IDH3A-201ENST00000299518 RSF1Q96T23 1441 aaPredicted RBP18.58■□□□□ 0.57
IDH3A-201ENST00000299518 CECR2Q9BXF3 1484 aa18.52■□□□□ 0.55
IDH3A-201ENST00000299518 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
IDH3A-201ENST00000299518 FAM9AQ8IZU1 332 aaPredicted RBP18.43■□□□□ 0.54
IDH3A-201ENST00000299518 RB1CC1Q8TDY2 1594 aa18.43■□□□□ 0.54
IDH3A-201ENST00000299518 PCGF6Q9BYE7 350 aa18.42■□□□□ 0.54
IDH3A-201ENST00000299518 NACADO15069 1562 aa18.39■□□□□ 0.53
IDH3A-201ENST00000299518 MROH2BQ7Z745 1585 aa18.35■□□□□ 0.53
IDH3A-201ENST00000299518 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
IDH3A-201ENST00000299518 WIZO95785 1651 aa18.26■□□□□ 0.51
IDH3A-201ENST00000299518 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
IDH3A-201ENST00000299518 PPARGC1BQ86YN6 1023 aaKnown RBP18.1■□□□□ 0.49
IDH3A-201ENST00000299518 HRCP23327 699 aa18.08■□□□□ 0.49
IDH3A-201ENST00000299518 UNC13AQ9UPW8 1703 aa18.06■□□□□ 0.48
IDH3A-201ENST00000299518 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
IDH3A-201ENST00000299518 SMARCA4P51532 1647 aa17.88■□□□□ 0.45
IDH3A-201ENST00000299518 ABCC8Q09428 1581 aa17.88■□□□□ 0.45
IDH3A-201ENST00000299518 CCDC88BA6NC98 1476 aa17.85■□□□□ 0.45
IDH3A-201ENST00000299518 TRIM26Q12899 539 aaPredicted RBP17.85■□□□□ 0.45
IDH3A-201ENST00000299518 BICRAQ9NZM4 1560 aa17.83■□□□□ 0.44
IDH3A-201ENST00000299518 TTBK1Q5TCY1 1321 aaPredicted RBP17.79■□□□□ 0.44
IDH3A-201ENST00000299518 TOP2AP11388 1531 aaKnown RBP17.77■□□□□ 0.44
IDH3A-201ENST00000299518 SMARCA2P51531 1590 aa17.76■□□□□ 0.43
IDH3A-201ENST00000299518 EIF4G1Q04637 1599 aaKnown RBP17.75■□□□□ 0.43
IDH3A-201ENST00000299518 SOGA1O94964 1423 aa17.68■□□□□ 0.42
IDH3A-201ENST00000299518 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
IDH3A-201ENST00000299518 UBTFP17480 764 aaKnown RBP17.53■□□□□ 0.4
IDH3A-201ENST00000299518 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
IDH3A-201ENST00000299518 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
IDH3A-201ENST00000299518 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
IDH3A-201ENST00000299518 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
IDH3A-201ENST00000299518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
IDH3A-201ENST00000299518 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
IDH3A-201ENST00000299518 CEP162Q5TB80 1403 aa17.41■□□□□ 0.38
IDH3A-201ENST00000299518 SYNJ1O43426 1573 aa17.4■□□□□ 0.38
IDH3A-201ENST00000299518 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.37
IDH3A-201ENST00000299518 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
IDH3A-201ENST00000299518 CCER1Q8TC90 406 aaPredicted RBP17.26■□□□□ 0.35
IDH3A-201ENST00000299518 GOLGA3Q08378 1498 aa17.21■□□□□ 0.35
IDH3A-201ENST00000299518 RAPGEF2Q9Y4G8 1499 aa17.2■□□□□ 0.34
IDH3A-201ENST00000299518 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
IDH3A-201ENST00000299518 EEA1Q15075 1411 aa17.17■□□□□ 0.34
IDH3A-201ENST00000299518 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
IDH3A-201ENST00000299518 CLIP1P30622 1438 aa17.11■□□□□ 0.33
IDH3A-201ENST00000299518 CEP164Q9UPV0 1460 aa17.11■□□□□ 0.33
IDH3A-201ENST00000299518 NCAPD3P42695 1498 aa17.1■□□□□ 0.33
IDH3A-201ENST00000299518 TOP2BQ02880 1626 aa17.06■□□□□ 0.32
IDH3A-201ENST00000299518 CUX1P39880 1505 aa17.06■□□□□ 0.32
IDH3A-201ENST00000299518 KIF21BO75037 1637 aa17.02■□□□□ 0.31
IDH3A-201ENST00000299518 HMGXB3Q12766 1538 aa17■□□□□ 0.31
IDH3A-201ENST00000299518 CFTRP13569 1480 aa16.96■□□□□ 0.31
IDH3A-201ENST00000299518 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
IDH3A-201ENST00000299518 APLP2Q06481 763 aa16.96■□□□□ 0.31
IDH3A-201ENST00000299518 BIVM-ERCC5R4GMW8 1640 aa16.95■□□□□ 0.3
IDH3A-201ENST00000299518 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
IDH3A-201ENST00000299518 KANK4Q5T7N3 995 aaPredicted RBP16.94■□□□□ 0.3
IDH3A-201ENST00000299518 CC2D2AQ9P2K1 1620 aa16.9■□□□□ 0.3
IDH3A-201ENST00000299518 PRXQ9BXM0 1461 aa16.89■□□□□ 0.29
IDH3A-201ENST00000299518 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
IDH3A-201ENST00000299518 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
IDH3A-201ENST00000299518 P3H3Q8IVL6 736 aa16.85■□□□□ 0.29
IDH3A-201ENST00000299518 CUX2O14529 1486 aa16.85■□□□□ 0.29
IDH3A-201ENST00000299518 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
IDH3A-201ENST00000299518 NESP48681 1621 aa16.85■□□□□ 0.29
IDH3A-201ENST00000299518 ITGAEP38570 1179 aa16.83■□□□□ 0.28
IDH3A-201ENST00000299518 IGF1RP08069 1367 aa16.79■□□□□ 0.28
IDH3A-201ENST00000299518 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
IDH3A-201ENST00000299518 DIEXFQ68CQ4 756 aaKnown RBP16.78■□□□□ 0.28
IDH3A-201ENST00000299518 ATP1B4Q9UN42 357 aaPredicted RBP16.77■□□□□ 0.27
IDH3A-201ENST00000299518 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
IDH3A-201ENST00000299518 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
IDH3A-201ENST00000299518 ARHGAP35Q9NRY4 1499 aa16.74■□□□□ 0.27
IDH3A-201ENST00000299518 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
IDH3A-201ENST00000299518 CARMIL1Q5VZK9 1371 aa16.71■□□□□ 0.27
IDH3A-201ENST00000299518 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
IDH3A-201ENST00000299518 PRDM2Q13029 1718 aa16.66■□□□□ 0.26
IDH3A-201ENST00000299518 ZNF316A6NFI3 1004 aaPredicted RBP16.63■□□□□ 0.25
IDH3A-201ENST00000299518 NEUROD1Q13562 356 aa16.62■□□□□ 0.25
IDH3A-201ENST00000299518 YTHDC1Q96MU7 727 aaKnown RBP16.61■□□□□ 0.25
IDH3A-201ENST00000299518 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
IDH3A-201ENST00000299518 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
IDH3A-201ENST00000299518 TOPBP1Q92547 1522 aa16.58■□□□□ 0.25
IDH3A-201ENST00000299518 FHOD3Q2V2M9 1422 aa16.56■□□□□ 0.24
IDH3A-201ENST00000299518 DHX57Q6P158 1386 aaKnown RBP16.54■□□□□ 0.24
IDH3A-201ENST00000299518 FAM50AQ14320 339 aaKnown RBP16.54■□□□□ 0.24
IDH3A-201ENST00000299518 MIER1Q8N108 512 aa16.54■□□□□ 0.24
IDH3A-201ENST00000299518 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
IDH3A-201ENST00000299518 CCNB3Q8WWL7 1395 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms