RNA–Protein interactions for RNA: ENST00000298815.12

ARHGAP42-201, Transcript of Rho GTPase activating protein 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ARHGAP42, Length 4,752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-201ENST00000298815 NISCHQ9Y2I1 1504 aa9.89□□□□□ -0.83
ARHGAP42-201ENST00000298815 CCDC180Q9P1Z9 1646 aa8.86□□□□□ -0.99
ARHGAP42-201ENST00000298815 ABCC9O60706 1549 aa8.77□□□□□ -1.01
ARHGAP42-201ENST00000298815 DCAF8L2P0C7V8 631 aa8.74□□□□□ -1.01
ARHGAP42-201ENST00000298815 RB1CC1Q8TDY2 1594 aa8.54□□□□□ -1.04
ARHGAP42-201ENST00000298815 NACADO15069 1562 aa8.47□□□□□ -1.05
ARHGAP42-201ENST00000298815 MYO15BQ96JP2 1530 aa8.34□□□□□ -1.08
ARHGAP42-201ENST00000298815 SHROOM4Q9ULL8 1493 aa8.29□□□□□ -1.08
ARHGAP42-201ENST00000298815 DCAF1Q9Y4B6 1507 aa8.23□□□□□ -1.09
ARHGAP42-201ENST00000298815 PABPN1Q86U42 306 aaKnown RBP eCLIP8.21□□□□□ -1.1
ARHGAP42-201ENST00000298815 ZCCHC6Q5VYS8 1495 aaKnown RBP8.18□□□□□ -1.1
ARHGAP42-201ENST00000298815 SCRIBQ14160 1630 aa8.06□□□□□ -1.12
ARHGAP42-201ENST00000298815 CECR2Q9BXF3 1484 aa7.97□□□□□ -1.13
ARHGAP42-201ENST00000298815 ERCC6Q03468 1493 aa7.87□□□□□ -1.15
ARHGAP42-201ENST00000298815 SMARCA2P51531 1590 aa7.87□□□□□ -1.15
ARHGAP42-201ENST00000298815 EIF4G1Q04637 1599 aaKnown RBP7.85□□□□□ -1.15
ARHGAP42-201ENST00000298815 BICRAQ9NZM4 1560 aa7.84□□□□□ -1.15
ARHGAP42-201ENST00000298815 DNAJC5BQ9UF47 199 aa7.83□□□□□ -1.16
ARHGAP42-201ENST00000298815 CC2D2AQ9P2K1 1620 aa7.82□□□□□ -1.16
ARHGAP42-201ENST00000298815 BAZ1AQ9NRL2 1556 aaPredicted RBP7.81□□□□□ -1.16
ARHGAP42-201ENST00000298815 BAZ1BQ9UIG0 1483 aaKnown RBP7.8□□□□□ -1.16
ARHGAP42-201ENST00000298815 FAM9AQ8IZU1 332 aaPredicted RBP7.79□□□□□ -1.16
ARHGAP42-201ENST00000298815 PDS5BQ9NTI5 1447 aa7.76□□□□□ -1.17
ARHGAP42-201ENST00000298815 UNC13AQ9UPW8 1703 aa7.76□□□□□ -1.17
ARHGAP42-201ENST00000298815 NCAPD3P42695 1498 aa7.73□□□□□ -1.17
ARHGAP42-201ENST00000298815 CUX2O14529 1486 aa7.73□□□□□ -1.17
ARHGAP42-201ENST00000298815 HMGXB3Q12766 1538 aa7.7□□□□□ -1.18
ARHGAP42-201ENST00000298815 ATAD2BQ9ULI0 1458 aa7.68□□□□□ -1.18
ARHGAP42-201ENST00000298815 SMARCA4P51532 1647 aa7.66□□□□□ -1.18
ARHGAP42-201ENST00000298815 CADPSQ9ULU8 1353 aa7.6□□□□□ -1.19
ARHGAP42-201ENST00000298815 LAMC3Q9Y6N6 1575 aa7.6□□□□□ -1.19
ARHGAP42-201ENST00000298815 ABCC8Q09428 1581 aa7.59□□□□□ -1.19
ARHGAP42-201ENST00000298815 CEP164Q9UPV0 1460 aa7.57□□□□□ -1.2
ARHGAP42-201ENST00000298815 SUPT5HO00267 1087 aaKnown RBP7.56□□□□□ -1.2
ARHGAP42-201ENST00000298815 DNAJC5Q9H3Z4 198 aa7.55□□□□□ -1.2
ARHGAP42-201ENST00000298815 MRC2Q9UBG0 1479 aa7.54□□□□□ -1.2
ARHGAP42-201ENST00000298815 PEG3Q9GZU2 1588 aa7.52□□□□□ -1.21
ARHGAP42-201ENST00000298815 TOP2AP11388 1531 aaKnown RBP7.51□□□□□ -1.21
ARHGAP42-201ENST00000298815 MROH2BQ7Z745 1585 aa7.49□□□□□ -1.21
ARHGAP42-201ENST00000298815 OSCARQ8IYS5 282 aa7.49□□□□□ -1.21
ARHGAP42-201ENST00000298815 FANCD2Q9BXW9 1451 aa7.48□□□□□ -1.21
ARHGAP42-201ENST00000298815 RSF1Q96T23 1441 aaPredicted RBP7.48□□□□□ -1.21
ARHGAP42-201ENST00000298815 FBLN2P98095 1184 aa7.47□□□□□ -1.21
ARHGAP42-201ENST00000298815 NPM1P06748 294 aaKnown RBP eCLIP7.44□□□□□ -1.22
ARHGAP42-201ENST00000298815 CHMP7Q8WUX9 453 aaPredicted RBP7.44□□□□□ -1.22
ARHGAP42-201ENST00000298815 IFT140Q96RY7 1462 aa7.43□□□□□ -1.22
ARHGAP42-201ENST00000298815 CFTRP13569 1480 aa7.41□□□□□ -1.22
ARHGAP42-201ENST00000298815 TRIM41Q8WV44 630 aa7.38□□□□□ -1.23
ARHGAP42-201ENST00000298815 NESP48681 1621 aa7.37□□□□□ -1.23
ARHGAP42-201ENST00000298815 WIZO95785 1651 aa7.37□□□□□ -1.23
ARHGAP42-201ENST00000298815 WDR62O43379 1518 aa7.35□□□□□ -1.23
ARHGAP42-201ENST00000298815 CCDC88BA6NC98 1476 aa7.35□□□□□ -1.23
ARHGAP42-201ENST00000298815 SOGA1O94964 1423 aa7.34□□□□□ -1.23
ARHGAP42-201ENST00000298815 WRNQ14191 1432 aaPredicted RBP eCLIP7.34□□□□□ -1.23
ARHGAP42-201ENST00000298815 TRHP20396 242 aaPredicted RBP7.32□□□□□ -1.24
ARHGAP42-201ENST00000298815 DNMBPQ6XZF7 1577 aa7.31□□□□□ -1.24
ARHGAP42-201ENST00000298815 WDR97A6NE52 1622 aa7.3□□□□□ -1.24
ARHGAP42-201ENST00000298815 THOC2Q8NI27 1593 aaKnown RBP7.3□□□□□ -1.24
ARHGAP42-201ENST00000298815 GRIN2BQ13224 1484 aa7.28□□□□□ -1.24
ARHGAP42-201ENST00000298815 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
ARHGAP42-201ENST00000298815 KIF21AQ7Z4S6 1674 aa7.26□□□□□ -1.25
ARHGAP42-201ENST00000298815 SYNJ1O43426 1573 aa7.25□□□□□ -1.25
ARHGAP42-201ENST00000298815 MAGI1Q96QZ7 1491 aaPredicted RBP7.25□□□□□ -1.25
ARHGAP42-201ENST00000298815 KIF27Q86VH2 1401 aa7.25□□□□□ -1.25
ARHGAP42-201ENST00000298815 AEBP2Q6ZN18 517 aaPredicted RBP7.24□□□□□ -1.25
ARHGAP42-201ENST00000298815 CARMIL2Q6F5E8 1435 aa7.24□□□□□ -1.25
ARHGAP42-201ENST00000298815 PRDM2Q13029 1718 aa7.24□□□□□ -1.25
ARHGAP42-201ENST00000298815 GAPVD1Q14C86 1478 aa7.22□□□□□ -1.25
ARHGAP42-201ENST00000298815 URB2Q14146 1524 aaKnown RBP7.21□□□□□ -1.26
ARHGAP42-201ENST00000298815 FGD5Q6ZNL6 1462 aa7.2□□□□□ -1.26
ARHGAP42-201ENST00000298815 CYB5RLQ6IPT4 315 aa7.2□□□□□ -1.26
ARHGAP42-201ENST00000298815 TDRD9Q8NDG6 1382 aaKnown RBP7.2□□□□□ -1.26
ARHGAP42-201ENST00000298815 FHAD1B1AJZ9 1412 aa7.19□□□□□ -1.26
ARHGAP42-201ENST00000298815 SYNJ2O15056 1496 aa7.19□□□□□ -1.26
ARHGAP42-201ENST00000298815 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.17□□□□□ -1.26
ARHGAP42-201ENST00000298815 HNRNPUL2Q1KMD3 747 aaKnown RBP7.17□□□□□ -1.26
ARHGAP42-201ENST00000298815 POLA1P09884 1462 aaPredicted RBP7.17□□□□□ -1.26
ARHGAP42-201ENST00000298815 CDK11AQ9UQ88 783 aaPredicted RBP7.16□□□□□ -1.26
ARHGAP42-201ENST00000298815 SNAPC4Q5SXM2 1469 aa7.16□□□□□ -1.26
ARHGAP42-201ENST00000298815 AQRO60306 1485 aaKnown RBP eCLIP7.15□□□□□ -1.26
ARHGAP42-201ENST00000298815 EEA1Q15075 1411 aa7.15□□□□□ -1.27
ARHGAP42-201ENST00000298815 APLP2Q06481 763 aa7.15□□□□□ -1.27
ARHGAP42-201ENST00000298815 TTBK1Q5TCY1 1321 aaPredicted RBP7.14□□□□□ -1.27
ARHGAP42-201ENST00000298815 ABCA10Q8WWZ4 1543 aa7.13□□□□□ -1.27
ARHGAP42-201ENST00000298815 GOLGA3Q08378 1498 aa7.13□□□□□ -1.27
ARHGAP42-201ENST00000298815 UBTFP17480 764 aaKnown RBP7.12□□□□□ -1.27
ARHGAP42-201ENST00000298815 RAD54L2Q9Y4B4 1467 aa7.11□□□□□ -1.27
ARHGAP42-201ENST00000298815 ERICH3Q5RHP9 1530 aa7.11□□□□□ -1.27
ARHGAP42-201ENST00000298815 JPH4Q96JJ6 628 aa7.11□□□□□ -1.27
ARHGAP42-201ENST00000298815 MYT1LQ9UL68 1186 aa7.11□□□□□ -1.27
ARHGAP42-201ENST00000298815 EIF4G3O43432 1585 aaKnown RBP7.11□□□□□ -1.27
ARHGAP42-201ENST00000298815 CARMIL1Q5VZK9 1371 aa7.1□□□□□ -1.27
ARHGAP42-201ENST00000298815 ATP1B4Q9UN42 357 aaPredicted RBP7.09□□□□□ -1.27
ARHGAP42-201ENST00000298815 ZNF608Q9ULD9 1512 aaPredicted RBP7.07□□□□□ -1.28
ARHGAP42-201ENST00000298815 PTPRGP23470 1445 aa7.07□□□□□ -1.28
ARHGAP42-201ENST00000298815 TOP2BQ02880 1626 aa7.07□□□□□ -1.28
ARHGAP42-201ENST00000298815 ESF1Q9H501 851 aaKnown RBP7.07□□□□□ -1.28
ARHGAP42-201ENST00000298815 CUX1P39880 1505 aa7.07□□□□□ -1.28
ARHGAP42-201ENST00000298815 GRIN2AQ12879 1464 aa7.07□□□□□ -1.28
ARHGAP42-201ENST00000298815 ARHGEF11O15085 1522 aa7.06□□□□□ -1.28
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