RNA–Protein interactions for RNA: ENST00000295548.3

ATP13A4-201, Transcript of ATPase 13A4, humanhuman

TSL 5 BASIC

Gene ATP13A4, Length 2,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A4-201ENST00000295548 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
ATP13A4-201ENST00000295548 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
ATP13A4-201ENST00000295548 AEBP2Q6ZN18 517 aaPredicted RBP16.82■□□□□ 0.28
ATP13A4-201ENST00000295548 CCDC180Q9P1Z9 1646 aa16.46■□□□□ 0.23
ATP13A4-201ENST00000295548 ABCC9O60706 1549 aa15.95■□□□□ 0.14
ATP13A4-201ENST00000295548 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
ATP13A4-201ENST00000295548 ZCCHC6Q5VYS8 1495 aaKnown RBP15.72■□□□□ 0.11
ATP13A4-201ENST00000295548 PHF23Q9BUL5 403 aaPredicted RBP15.68■□□□□ 0.1
ATP13A4-201ENST00000295548 DCAF1Q9Y4B6 1507 aa15.51■□□□□ 0.07
ATP13A4-201ENST00000295548 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
ATP13A4-201ENST00000295548 NACADO15069 1562 aa15.45■□□□□ 0.06
ATP13A4-201ENST00000295548 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
ATP13A4-201ENST00000295548 EHMT2Q96KQ7 1210 aa15.32■□□□□ 0.04
ATP13A4-201ENST00000295548 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
ATP13A4-201ENST00000295548 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
ATP13A4-201ENST00000295548 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
ATP13A4-201ENST00000295548 UNC13AQ9UPW8 1703 aa15.01□□□□□ -0.01
ATP13A4-201ENST00000295548 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
ATP13A4-201ENST00000295548 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
ATP13A4-201ENST00000295548 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
ATP13A4-201ENST00000295548 PLPPR3Q6T4P5 718 aa14.68□□□□□ -0.06
ATP13A4-201ENST00000295548 KCNA4P22459 653 aa14.54□□□□□ -0.08
ATP13A4-201ENST00000295548 MROH2BQ7Z745 1585 aa14.53□□□□□ -0.08
ATP13A4-201ENST00000295548 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
ATP13A4-201ENST00000295548 BAZ1AQ9NRL2 1556 aaPredicted RBP14.52□□□□□ -0.08
ATP13A4-201ENST00000295548 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
ATP13A4-201ENST00000295548 SMARCA4P51532 1647 aa14.49□□□□□ -0.09
ATP13A4-201ENST00000295548 SUPT5HO00267 1087 aaKnown RBP14.47□□□□□ -0.09
ATP13A4-201ENST00000295548 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
ATP13A4-201ENST00000295548 CC2D2AQ9P2K1 1620 aa14.39□□□□□ -0.11
ATP13A4-201ENST00000295548 ATAD2BQ9ULI0 1458 aa14.38□□□□□ -0.11
ATP13A4-201ENST00000295548 WIZO95785 1651 aa14.36□□□□□ -0.11
ATP13A4-201ENST00000295548 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
ATP13A4-201ENST00000295548 PEG3Q9GZU2 1588 aa14.33□□□□□ -0.12
ATP13A4-201ENST00000295548 SMARCA2P51531 1590 aa14.32□□□□□ -0.12
ATP13A4-201ENST00000295548 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
ATP13A4-201ENST00000295548 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
ATP13A4-201ENST00000295548 HMGXB3Q12766 1538 aa14.21□□□□□ -0.13
ATP13A4-201ENST00000295548 TOP2AP11388 1531 aaKnown RBP14.19□□□□□ -0.14
ATP13A4-201ENST00000295548 RTN4Q9NQC3 1192 aaKnown RBP14.18□□□□□ -0.14
ATP13A4-201ENST00000295548 PELP1Q8IZL8 1130 aaKnown RBP14.14□□□□□ -0.15
ATP13A4-201ENST00000295548 CCDC88BA6NC98 1476 aa14.09□□□□□ -0.15
ATP13A4-201ENST00000295548 ADRA2BP18089 450 aa14.07□□□□□ -0.16
ATP13A4-201ENST00000295548 MYT1Q01538 1121 aa14□□□□□ -0.17
ATP13A4-201ENST00000295548 SLC4A1APQ9BWU0 796 aaKnown RBP13.93□□□□□ -0.18
ATP13A4-201ENST00000295548 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
ATP13A4-201ENST00000295548 NESP48681 1621 aa13.91□□□□□ -0.18
ATP13A4-201ENST00000295548 CFTRP13569 1480 aa13.9□□□□□ -0.18
ATP13A4-201ENST00000295548 HRCP23327 699 aa13.83□□□□□ -0.2
ATP13A4-201ENST00000295548 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
ATP13A4-201ENST00000295548 LAMC3Q9Y6N6 1575 aa13.82□□□□□ -0.2
ATP13A4-201ENST00000295548 PDS5BQ9NTI5 1447 aa13.76□□□□□ -0.21
ATP13A4-201ENST00000295548 FANCD2Q9BXW9 1451 aa13.76□□□□□ -0.21
ATP13A4-201ENST00000295548 SENP3Q9H4L4 574 aaPredicted RBP13.75□□□□□ -0.21
ATP13A4-201ENST00000295548 ERCC6Q03468 1493 aa13.69□□□□□ -0.22
ATP13A4-201ENST00000295548 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
ATP13A4-201ENST00000295548 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
ATP13A4-201ENST00000295548 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
ATP13A4-201ENST00000295548 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
ATP13A4-201ENST00000295548 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
ATP13A4-201ENST00000295548 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
ATP13A4-201ENST00000295548 URB2Q14146 1524 aaKnown RBP13.61□□□□□ -0.23
ATP13A4-201ENST00000295548 CUX1P39880 1505 aa13.6□□□□□ -0.23
ATP13A4-201ENST00000295548 MRC2Q9UBG0 1479 aa13.59□□□□□ -0.23
ATP13A4-201ENST00000295548 SYNJ1O43426 1573 aa13.57□□□□□ -0.24
ATP13A4-201ENST00000295548 TOPBP1Q92547 1522 aa13.57□□□□□ -0.24
ATP13A4-201ENST00000295548 TTBK1Q5TCY1 1321 aaPredicted RBP13.55□□□□□ -0.24
ATP13A4-201ENST00000295548 DNMBPQ6XZF7 1577 aa13.53□□□□□ -0.24
ATP13A4-201ENST00000295548 THOC2Q8NI27 1593 aaKnown RBP13.53□□□□□ -0.24
ATP13A4-201ENST00000295548 TOP2BQ02880 1626 aa13.52□□□□□ -0.24
ATP13A4-201ENST00000295548 WDR62O43379 1518 aa13.52□□□□□ -0.25
ATP13A4-201ENST00000295548 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
ATP13A4-201ENST00000295548 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
ATP13A4-201ENST00000295548 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
ATP13A4-201ENST00000295548 POLA1P09884 1462 aaPredicted RBP13.49□□□□□ -0.25
ATP13A4-201ENST00000295548 ZBTB22O15209 634 aa13.48□□□□□ -0.25
ATP13A4-201ENST00000295548 SOGA1O94964 1423 aa13.46□□□□□ -0.25
ATP13A4-201ENST00000295548 RAD54L2Q9Y4B4 1467 aa13.46□□□□□ -0.25
ATP13A4-201ENST00000295548 CUX2O14529 1486 aa13.45□□□□□ -0.26
ATP13A4-201ENST00000295548 TDRD9Q8NDG6 1382 aaKnown RBP13.38□□□□□ -0.27
ATP13A4-201ENST00000295548 IFT140Q96RY7 1462 aa13.38□□□□□ -0.27
ATP13A4-201ENST00000295548 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
ATP13A4-201ENST00000295548 TARBP1Q13395 1621 aaKnown RBP13.37□□□□□ -0.27
ATP13A4-201ENST00000295548 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
ATP13A4-201ENST00000295548 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
ATP13A4-201ENST00000295548 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
ATP13A4-201ENST00000295548 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
ATP13A4-201ENST00000295548 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
ATP13A4-201ENST00000295548 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
ATP13A4-201ENST00000295548 NCBP3Q53F19 620 aaKnown RBP13.3□□□□□ -0.28
ATP13A4-201ENST00000295548 GAPVD1Q14C86 1478 aa13.29□□□□□ -0.28
ATP13A4-201ENST00000295548 WDR97A6NE52 1622 aa13.28□□□□□ -0.28
ATP13A4-201ENST00000295548 IGF1RP08069 1367 aa13.27□□□□□ -0.28
ATP13A4-201ENST00000295548 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
ATP13A4-201ENST00000295548 EEA1Q15075 1411 aa13.24□□□□□ -0.29
ATP13A4-201ENST00000295548 PRKCSHP14314 528 aaPredicted RBP13.24□□□□□ -0.29
ATP13A4-201ENST00000295548 PPARGC1BQ86YN6 1023 aaKnown RBP13.24□□□□□ -0.29
ATP13A4-201ENST00000295548 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
ATP13A4-201ENST00000295548 GRIN2BQ13224 1484 aa13.22□□□□□ -0.29
ATP13A4-201ENST00000295548 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms