RNA–Protein interactions for RNA: ENST00000295488.7

HELQ-201, Transcript of helicase, POLQ like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HELQ, Length 3,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HELQ-201ENST00000295488 NISCHQ9Y2I1 1504 aa18.41■□□□□ 0.54
HELQ-201ENST00000295488 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
HELQ-201ENST00000295488 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
HELQ-201ENST00000295488 CCDC180Q9P1Z9 1646 aa15.58■□□□□ 0.08
HELQ-201ENST00000295488 ZCCHC6Q5VYS8 1495 aaKnown RBP15.5■□□□□ 0.07
HELQ-201ENST00000295488 SUPT5HO00267 1087 aaKnown RBP15.48■□□□□ 0.07
HELQ-201ENST00000295488 ABCC9O60706 1549 aa14.99□□□□□ -0.01
HELQ-201ENST00000295488 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
HELQ-201ENST00000295488 SCRIBQ14160 1630 aa14.86□□□□□ -0.03
HELQ-201ENST00000295488 CHIC1Q5VXU3 224 aa14.79□□□□□ -0.04
HELQ-201ENST00000295488 MYO15BQ96JP2 1530 aa14.7□□□□□ -0.06
HELQ-201ENST00000295488 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
HELQ-201ENST00000295488 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
HELQ-201ENST00000295488 NACADO15069 1562 aa14.52□□□□□ -0.08
HELQ-201ENST00000295488 LOC105371045A0A1W2PR82 267 aa14.5□□□□□ -0.09
HELQ-201ENST00000295488 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
HELQ-201ENST00000295488 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
HELQ-201ENST00000295488 RB1CC1Q8TDY2 1594 aa14.4□□□□□ -0.11
HELQ-201ENST00000295488 MROH2BQ7Z745 1585 aa14.39□□□□□ -0.11
HELQ-201ENST00000295488 FAM9AQ8IZU1 332 aaPredicted RBP14.38□□□□□ -0.11
HELQ-201ENST00000295488 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
HELQ-201ENST00000295488 WIZO95785 1651 aa14.3□□□□□ -0.12
HELQ-201ENST00000295488 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
HELQ-201ENST00000295488 UNC13AQ9UPW8 1703 aa14.18□□□□□ -0.14
HELQ-201ENST00000295488 BAZ1AQ9NRL2 1556 aaPredicted RBP14.12□□□□□ -0.15
HELQ-201ENST00000295488 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
HELQ-201ENST00000295488 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
HELQ-201ENST00000295488 CCDC88BA6NC98 1476 aa14.01□□□□□ -0.17
HELQ-201ENST00000295488 PPARGC1BQ86YN6 1023 aaKnown RBP13.99□□□□□ -0.17
HELQ-201ENST00000295488 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
HELQ-201ENST00000295488 TOP2AP11388 1531 aaKnown RBP13.96□□□□□ -0.17
HELQ-201ENST00000295488 SMARCA2P51531 1590 aa13.92□□□□□ -0.18
HELQ-201ENST00000295488 HRCP23327 699 aa13.92□□□□□ -0.18
HELQ-201ENST00000295488 EIF4G1Q04637 1599 aaKnown RBP13.87□□□□□ -0.19
HELQ-201ENST00000295488 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
HELQ-201ENST00000295488 TRIM26Q12899 539 aaPredicted RBP13.83□□□□□ -0.2
HELQ-201ENST00000295488 SOGA1O94964 1423 aa13.81□□□□□ -0.2
HELQ-201ENST00000295488 ATAD2BQ9ULI0 1458 aa13.8□□□□□ -0.2
HELQ-201ENST00000295488 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
HELQ-201ENST00000295488 BAZ1BQ9UIG0 1483 aaKnown RBP13.76□□□□□ -0.21
HELQ-201ENST00000295488 UBTFP17480 764 aaKnown RBP13.72□□□□□ -0.21
HELQ-201ENST00000295488 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
HELQ-201ENST00000295488 WRNQ14191 1432 aaPredicted RBP eCLIP13.68□□□□□ -0.22
HELQ-201ENST00000295488 CSRNP3Q8WYN3 585 aa13.67□□□□□ -0.22
HELQ-201ENST00000295488 PEG3Q9GZU2 1588 aa13.67□□□□□ -0.22
HELQ-201ENST00000295488 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
HELQ-201ENST00000295488 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
HELQ-201ENST00000295488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.52□□□□□ -0.25
HELQ-201ENST00000295488 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
HELQ-201ENST00000295488 TNIKQ9UKE5 1360 aa13.5□□□□□ -0.25
HELQ-201ENST00000295488 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
HELQ-201ENST00000295488 EEA1Q15075 1411 aa13.45□□□□□ -0.26
HELQ-201ENST00000295488 RAPGEF2Q9Y4G8 1499 aa13.44□□□□□ -0.26
HELQ-201ENST00000295488 HMGXB3Q12766 1538 aa13.42□□□□□ -0.26
HELQ-201ENST00000295488 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
HELQ-201ENST00000295488 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
HELQ-201ENST00000295488 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
HELQ-201ENST00000295488 CUX1P39880 1505 aa13.39□□□□□ -0.27
HELQ-201ENST00000295488 CLIP1P30622 1438 aa13.37□□□□□ -0.27
HELQ-201ENST00000295488 TOP2BQ02880 1626 aa13.37□□□□□ -0.27
HELQ-201ENST00000295488 CC2D2AQ9P2K1 1620 aa13.36□□□□□ -0.27
HELQ-201ENST00000295488 CFTRP13569 1480 aa13.35□□□□□ -0.27
HELQ-201ENST00000295488 HNRNPUL2Q1KMD3 747 aaKnown RBP13.34□□□□□ -0.27
HELQ-201ENST00000295488 ZEB1P37275 1124 aaPredicted RBP13.31□□□□□ -0.28
HELQ-201ENST00000295488 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
HELQ-201ENST00000295488 KIF21BO75037 1637 aa13.3□□□□□ -0.28
HELQ-201ENST00000295488 NESP48681 1621 aa13.29□□□□□ -0.28
HELQ-201ENST00000295488 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
HELQ-201ENST00000295488 APLP2Q06481 763 aa13.28□□□□□ -0.28
HELQ-201ENST00000295488 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
HELQ-201ENST00000295488 CUX2O14529 1486 aa13.25□□□□□ -0.29
HELQ-201ENST00000295488 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
HELQ-201ENST00000295488 VPS8Q8N3P4 1428 aa13.22□□□□□ -0.29
HELQ-201ENST00000295488 PRXQ9BXM0 1461 aa13.22□□□□□ -0.29
HELQ-201ENST00000295488 P3H3Q8IVL6 736 aa13.22□□□□□ -0.29
HELQ-201ENST00000295488 KANK4Q5T7N3 995 aaPredicted RBP13.21□□□□□ -0.3
HELQ-201ENST00000295488 FGD5Q6ZNL6 1462 aa13.2□□□□□ -0.3
HELQ-201ENST00000295488 FANCD2Q9BXW9 1451 aa13.19□□□□□ -0.3
HELQ-201ENST00000295488 RAD54L2Q9Y4B4 1467 aa13.19□□□□□ -0.3
HELQ-201ENST00000295488 IGF1RP08069 1367 aa13.17□□□□□ -0.3
HELQ-201ENST00000295488 ARAP1Q96P48 1450 aa13.16□□□□□ -0.3
HELQ-201ENST00000295488 ATP1B4Q9UN42 357 aaPredicted RBP13.16□□□□□ -0.3
HELQ-201ENST00000295488 ITGAEP38570 1179 aa13.14□□□□□ -0.31
HELQ-201ENST00000295488 CARMIL1Q5VZK9 1371 aa13.13□□□□□ -0.31
HELQ-201ENST00000295488 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
HELQ-201ENST00000295488 ARHGAP35Q9NRY4 1499 aa13.09□□□□□ -0.31
HELQ-201ENST00000295488 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
HELQ-201ENST00000295488 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
HELQ-201ENST00000295488 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
HELQ-201ENST00000295488 TOPBP1Q92547 1522 aa13.06□□□□□ -0.32
HELQ-201ENST00000295488 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.32
HELQ-201ENST00000295488 DNMBPQ6XZF7 1577 aa13□□□□□ -0.33
HELQ-201ENST00000295488 FHOD3Q2V2M9 1422 aa12.98□□□□□ -0.33
HELQ-201ENST00000295488 SCAF1Q9H7N4 1312 aaKnown RBP12.96□□□□□ -0.34
HELQ-201ENST00000295488 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
HELQ-201ENST00000295488 ABCA10Q8WWZ4 1543 aa12.95□□□□□ -0.34
HELQ-201ENST00000295488 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
HELQ-201ENST00000295488 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
HELQ-201ENST00000295488 PDS5BQ9NTI5 1447 aa12.93□□□□□ -0.34
HELQ-201ENST00000295488 KIF21AQ7Z4S6 1674 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms