RNA–Protein interactions for RNA: ENST00000272424.9

TPRKB-201, Transcript of TP53RK binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPRKB, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKB-201ENST00000272424 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
TPRKB-201ENST00000272424 CHIC1Q5VXU3 224 aa29.08■■■□□ 2.25
TPRKB-201ENST00000272424 PHF23Q9BUL5 403 aaPredicted RBP25.57■■□□□ 1.68
TPRKB-201ENST00000272424 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
TPRKB-201ENST00000272424 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
TPRKB-201ENST00000272424 ABCC9O60706 1549 aa23.92■■□□□ 1.42
TPRKB-201ENST00000272424 PLPPR3Q6T4P5 718 aa23.58■■□□□ 1.37
TPRKB-201ENST00000272424 FOXD1Q16676 465 aa23.51■■□□□ 1.35
TPRKB-201ENST00000272424 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
TPRKB-201ENST00000272424 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
TPRKB-201ENST00000272424 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
TPRKB-201ENST00000272424 ADRA2BP18089 450 aa22.53■■□□□ 1.2
TPRKB-201ENST00000272424 RB1CC1Q8TDY2 1594 aa22.34■■□□□ 1.17
TPRKB-201ENST00000272424 PABPN1Q86U42 306 aaKnown RBP eCLIP22.17■■□□□ 1.14
TPRKB-201ENST00000272424 PIAS4Q8N2W9 510 aaPredicted RBP22.13■■□□□ 1.13
TPRKB-201ENST00000272424 UNC13AQ9UPW8 1703 aa22■■□□□ 1.11
TPRKB-201ENST00000272424 NACADO15069 1562 aa21.98■■□□□ 1.11
TPRKB-201ENST00000272424 DCAF8L2P0C7V8 631 aa21.87■■□□□ 1.09
TPRKB-201ENST00000272424 BICRAQ9NZM4 1560 aa21.8■■□□□ 1.08
TPRKB-201ENST00000272424 MSH5O43196 834 aa21.71■■□□□ 1.07
TPRKB-201ENST00000272424 DNAJC5Q9H3Z4 198 aa21.61■■□□□ 1.05
TPRKB-201ENST00000272424 CECR2Q9BXF3 1484 aa21.56■■□□□ 1.04
TPRKB-201ENST00000272424 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
TPRKB-201ENST00000272424 MYO15BQ96JP2 1530 aa21.35■■□□□ 1.01
TPRKB-201ENST00000272424 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
TPRKB-201ENST00000272424 SHROOM4Q9ULL8 1493 aa21.21■□□□□ 0.99
TPRKB-201ENST00000272424 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
TPRKB-201ENST00000272424 ZCCHC6Q5VYS8 1495 aaKnown RBP21.12■□□□□ 0.97
TPRKB-201ENST00000272424 DCAF1Q9Y4B6 1507 aa20.9■□□□□ 0.94
TPRKB-201ENST00000272424 CUX2O14529 1486 aa20.77■□□□□ 0.92
TPRKB-201ENST00000272424 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
TPRKB-201ENST00000272424 ERCC6Q03468 1493 aa20.64■□□□□ 0.89
TPRKB-201ENST00000272424 SCAF1Q9H7N4 1312 aaKnown RBP20.63■□□□□ 0.89
TPRKB-201ENST00000272424 TRIM41Q8WV44 630 aa20.49■□□□□ 0.87
TPRKB-201ENST00000272424 MAPK8IP2Q13387 824 aaPredicted RBP20.46■□□□□ 0.87
TPRKB-201ENST00000272424 NESP48681 1621 aa20.37■□□□□ 0.85
TPRKB-201ENST00000272424 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
TPRKB-201ENST00000272424 THOC2Q8NI27 1593 aaKnown RBP20.26■□□□□ 0.83
TPRKB-201ENST00000272424 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
TPRKB-201ENST00000272424 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
TPRKB-201ENST00000272424 KCNA4P22459 653 aa20.2■□□□□ 0.82
TPRKB-201ENST00000272424 NCBP3Q53F19 620 aaKnown RBP20.19■□□□□ 0.82
TPRKB-201ENST00000272424 ATAD2BQ9ULI0 1458 aa20.18■□□□□ 0.82
TPRKB-201ENST00000272424 SMARCA2P51531 1590 aa20.14■□□□□ 0.81
TPRKB-201ENST00000272424 KIF21AQ7Z4S6 1674 aa20.1■□□□□ 0.81
TPRKB-201ENST00000272424 HMGXB3Q12766 1538 aa20.09■□□□□ 0.81
TPRKB-201ENST00000272424 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
TPRKB-201ENST00000272424 LAMC3Q9Y6N6 1575 aa19.99■□□□□ 0.79
TPRKB-201ENST00000272424 BAZ1BQ9UIG0 1483 aaKnown RBP19.96■□□□□ 0.79
TPRKB-201ENST00000272424 NPM3O75607 178 aaKnown RBP19.91■□□□□ 0.78
TPRKB-201ENST00000272424 BAZ1AQ9NRL2 1556 aaPredicted RBP19.88■□□□□ 0.77
TPRKB-201ENST00000272424 POTEDQ86YR6 584 aa19.87■□□□□ 0.77
TPRKB-201ENST00000272424 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
TPRKB-201ENST00000272424 RNF216Q9NWF9 866 aaPredicted RBP19.83■□□□□ 0.77
TPRKB-201ENST00000272424 HOXD11P31277 338 aaPredicted RBP19.78■□□□□ 0.76
TPRKB-201ENST00000272424 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
TPRKB-201ENST00000272424 WDR62O43379 1518 aa19.76■□□□□ 0.75
TPRKB-201ENST00000272424 PEG3Q9GZU2 1588 aa19.75■□□□□ 0.75
TPRKB-201ENST00000272424 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
TPRKB-201ENST00000272424 RIMBP3CA6NJZ7 1639 aa19.66■□□□□ 0.74
TPRKB-201ENST00000272424 RIMBP3BA6NNM3 1639 aa19.66■□□□□ 0.74
TPRKB-201ENST00000272424 RIMBP3Q9UFD9 1639 aa19.66■□□□□ 0.74
TPRKB-201ENST00000272424 CADPSQ9ULU8 1353 aa19.66■□□□□ 0.74
TPRKB-201ENST00000272424 MROH2BQ7Z745 1585 aa19.65■□□□□ 0.74
TPRKB-201ENST00000272424 CEP164Q9UPV0 1460 aa19.56■□□□□ 0.72
TPRKB-201ENST00000272424 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
TPRKB-201ENST00000272424 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
TPRKB-201ENST00000272424 WIZO95785 1651 aa19.43■□□□□ 0.7
TPRKB-201ENST00000272424 TRHP20396 242 aaPredicted RBP19.42■□□□□ 0.7
TPRKB-201ENST00000272424 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
TPRKB-201ENST00000272424 CYB5RLQ6IPT4 315 aa19.39■□□□□ 0.69
TPRKB-201ENST00000272424 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.68
TPRKB-201ENST00000272424 ZNF608Q9ULD9 1512 aaPredicted RBP19.31■□□□□ 0.68
TPRKB-201ENST00000272424 CFTRP13569 1480 aa19.29■□□□□ 0.68
TPRKB-201ENST00000272424 DCAF8L1A6NGE4 600 aa19.27■□□□□ 0.68
TPRKB-201ENST00000272424 ARAP1Q96P48 1450 aa19.25■□□□□ 0.67
TPRKB-201ENST00000272424 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
TPRKB-201ENST00000272424 CHD1O14646 1710 aa19.21■□□□□ 0.67
TPRKB-201ENST00000272424 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
TPRKB-201ENST00000272424 EIF4G3O43432 1585 aaKnown RBP19.16■□□□□ 0.66
TPRKB-201ENST00000272424 TOP2AP11388 1531 aaKnown RBP19.13■□□□□ 0.65
TPRKB-201ENST00000272424 PRDM2Q13029 1718 aa19.13■□□□□ 0.65
TPRKB-201ENST00000272424 FBLN2P98095 1184 aa19.06■□□□□ 0.64
TPRKB-201ENST00000272424 TOPBP1Q92547 1522 aa19.05■□□□□ 0.64
TPRKB-201ENST00000272424 AQRO60306 1485 aaKnown RBP eCLIP19.03■□□□□ 0.642e-9■■■■■ 39.4
TPRKB-201ENST00000272424 TARBP1Q13395 1621 aaKnown RBP18.96■□□□□ 0.63
TPRKB-201ENST00000272424 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
TPRKB-201ENST00000272424 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
TPRKB-201ENST00000272424 DNMBPQ6XZF7 1577 aa18.9■□□□□ 0.62
TPRKB-201ENST00000272424 CLASP1Q7Z460 1538 aa18.88■□□□□ 0.61
TPRKB-201ENST00000272424 ABCC8Q09428 1581 aa18.84■□□□□ 0.61
TPRKB-201ENST00000272424 SLC4A2P04920 1241 aa18.83■□□□□ 0.6
TPRKB-201ENST00000272424 RAD54L2Q9Y4B4 1467 aa18.82■□□□□ 0.6
TPRKB-201ENST00000272424 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
TPRKB-201ENST00000272424 SNAPC4Q5SXM2 1469 aa18.81■□□□□ 0.6
TPRKB-201ENST00000272424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.64e-8■□□□□ 10.6
TPRKB-201ENST00000272424 TDRD9Q8NDG6 1382 aaKnown RBP18.8■□□□□ 0.6
TPRKB-201ENST00000272424 SYNJ1O43426 1573 aa18.77■□□□□ 0.6
TPRKB-201ENST00000272424 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
TPRKB-201ENST00000272424 CHMP7Q8WUX9 453 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms