RNA–Protein interactions for RNA: ENST00000269829.5

ZNF544-201, Transcript of zinc finger protein 544, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF544, Length 3,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-201ENST00000269829 NISCHQ9Y2I1 1504 aa17.82■□□□□ 0.44
ZNF544-201ENST00000269829 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
ZNF544-201ENST00000269829 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
ZNF544-201ENST00000269829 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.03
ZNF544-201ENST00000269829 MYO15BQ96JP2 1530 aa15.07■□□□□ 0
ZNF544-201ENST00000269829 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
ZNF544-201ENST00000269829 ZCCHC6Q5VYS8 1495 aaKnown RBP14.94□□□□□ -0.02
ZNF544-201ENST00000269829 NACADO15069 1562 aa14.85□□□□□ -0.03
ZNF544-201ENST00000269829 ABCC9O60706 1549 aa14.84□□□□□ -0.03
ZNF544-201ENST00000269829 SUPT5HO00267 1087 aaKnown RBP14.81□□□□□ -0.04
ZNF544-201ENST00000269829 RB1CC1Q8TDY2 1594 aa14.74□□□□□ -0.05
ZNF544-201ENST00000269829 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
ZNF544-201ENST00000269829 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
ZNF544-201ENST00000269829 BICRAQ9NZM4 1560 aa14.29□□□□□ -0.12
ZNF544-201ENST00000269829 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.14
ZNF544-201ENST00000269829 CECR2Q9BXF3 1484 aa14.03□□□□□ -0.16
ZNF544-201ENST00000269829 RSF1Q96T23 1441 aaPredicted RBP13.99□□□□□ -0.17
ZNF544-201ENST00000269829 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
ZNF544-201ENST00000269829 MROH2BQ7Z745 1585 aa13.88□□□□□ -0.19
ZNF544-201ENST00000269829 PEG3Q9GZU2 1588 aa13.85□□□□□ -0.19
ZNF544-201ENST00000269829 EIF4G1Q04637 1599 aaKnown RBP13.81□□□□□ -0.2
ZNF544-201ENST00000269829 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
ZNF544-201ENST00000269829 WIZO95785 1651 aa13.77□□□□□ -0.2
ZNF544-201ENST00000269829 FAM9AQ8IZU1 332 aaPredicted RBP13.77□□□□□ -0.21
ZNF544-201ENST00000269829 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
ZNF544-201ENST00000269829 SMARCA4P51532 1647 aa13.75□□□□□ -0.21
ZNF544-201ENST00000269829 TRIM41Q8WV44 630 aa13.74□□□□□ -0.21
ZNF544-201ENST00000269829 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
ZNF544-201ENST00000269829 HMGXB3Q12766 1538 aa13.69□□□□□ -0.22
ZNF544-201ENST00000269829 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
ZNF544-201ENST00000269829 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
ZNF544-201ENST00000269829 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
ZNF544-201ENST00000269829 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
ZNF544-201ENST00000269829 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
ZNF544-201ENST00000269829 TOP2AP11388 1531 aaKnown RBP13.5□□□□□ -0.25
ZNF544-201ENST00000269829 BAZ1BQ9UIG0 1483 aaKnown RBP13.48□□□□□ -0.25
ZNF544-201ENST00000269829 AEBP2Q6ZN18 517 aaPredicted RBP13.44□□□□□ -0.26
ZNF544-201ENST00000269829 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
ZNF544-201ENST00000269829 ABCC8Q09428 1581 aa13.39□□□□□ -0.27
ZNF544-201ENST00000269829 LAMC3Q9Y6N6 1575 aa13.28□□□□□ -0.28
ZNF544-201ENST00000269829 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.28
ZNF544-201ENST00000269829 RANGAP1P46060 587 aaPredicted RBP13.26□□□□□ -0.29
ZNF544-201ENST00000269829 PCGF6Q9BYE7 350 aa13.26□□□□□ -0.29
ZNF544-201ENST00000269829 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
ZNF544-201ENST00000269829 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
ZNF544-201ENST00000269829 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.299e-6■■■■■ 50.1
ZNF544-201ENST00000269829 TTBK1Q5TCY1 1321 aaPredicted RBP13.21□□□□□ -0.3
ZNF544-201ENST00000269829 SOGA1O94964 1423 aa13.2□□□□□ -0.3
ZNF544-201ENST00000269829 CSRNP3Q8WYN3 585 aa13.15□□□□□ -0.3
ZNF544-201ENST00000269829 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
ZNF544-201ENST00000269829 CFTRP13569 1480 aa13.13□□□□□ -0.31
ZNF544-201ENST00000269829 SYNJ1O43426 1573 aa13.08□□□□□ -0.32
ZNF544-201ENST00000269829 THOC2Q8NI27 1593 aaKnown RBP13.05□□□□□ -0.32
ZNF544-201ENST00000269829 CADPSQ9ULU8 1353 aa13.05□□□□□ -0.32
ZNF544-201ENST00000269829 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.33
ZNF544-201ENST00000269829 NESP48681 1621 aa13.02□□□□□ -0.33
ZNF544-201ENST00000269829 WDR62O43379 1518 aa12.99□□□□□ -0.33
ZNF544-201ENST00000269829 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
ZNF544-201ENST00000269829 PDS5BQ9NTI5 1447 aa12.97□□□□□ -0.33
ZNF544-201ENST00000269829 TRIM26Q12899 539 aaPredicted RBP12.96□□□□□ -0.33
ZNF544-201ENST00000269829 CUX2O14529 1486 aa12.96□□□□□ -0.33
ZNF544-201ENST00000269829 EEA1Q15075 1411 aa12.94□□□□□ -0.34
ZNF544-201ENST00000269829 CUX1P39880 1505 aa12.93□□□□□ -0.34
ZNF544-201ENST00000269829 CEP162Q5TB80 1403 aa12.93□□□□□ -0.34
ZNF544-201ENST00000269829 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
ZNF544-201ENST00000269829 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
ZNF544-201ENST00000269829 BIVM-ERCC5R4GMW8 1640 aa12.9□□□□□ -0.34
ZNF544-201ENST00000269829 TOP2BQ02880 1626 aa12.9□□□□□ -0.34
ZNF544-201ENST00000269829 MRC2Q9UBG0 1479 aa12.9□□□□□ -0.34
ZNF544-201ENST00000269829 CEP164Q9UPV0 1460 aa12.88□□□□□ -0.35
ZNF544-201ENST00000269829 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
ZNF544-201ENST00000269829 TNIKQ9UKE5 1360 aa12.88□□□□□ -0.35
ZNF544-201ENST00000269829 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
ZNF544-201ENST00000269829 KIF27Q86VH2 1401 aa12.87□□□□□ -0.35
ZNF544-201ENST00000269829 APLP2Q06481 763 aa12.86□□□□□ -0.35
ZNF544-201ENST00000269829 FGD5Q6ZNL6 1462 aa12.84□□□□□ -0.35
ZNF544-201ENST00000269829 RAD54L2Q9Y4B4 1467 aa12.82□□□□□ -0.36
ZNF544-201ENST00000269829 ATP1B4Q9UN42 357 aaPredicted RBP12.82□□□□□ -0.36
ZNF544-201ENST00000269829 CLIP1P30622 1438 aa12.82□□□□□ -0.36
ZNF544-201ENST00000269829 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
ZNF544-201ENST00000269829 TDRD9Q8NDG6 1382 aaKnown RBP12.78□□□□□ -0.36
ZNF544-201ENST00000269829 URB2Q14146 1524 aaKnown RBP12.78□□□□□ -0.36
ZNF544-201ENST00000269829 HRCP23327 699 aa12.76□□□□□ -0.37
ZNF544-201ENST00000269829 ERCC6Q03468 1493 aa12.76□□□□□ -0.37
ZNF544-201ENST00000269829 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
ZNF544-201ENST00000269829 TARBP1Q13395 1621 aaKnown RBP12.75□□□□□ -0.37
ZNF544-201ENST00000269829 IGF1RP08069 1367 aa12.74□□□□□ -0.37
ZNF544-201ENST00000269829 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
ZNF544-201ENST00000269829 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
ZNF544-201ENST00000269829 KIF21BO75037 1637 aa12.71□□□□□ -0.37
ZNF544-201ENST00000269829 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
ZNF544-201ENST00000269829 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
ZNF544-201ENST00000269829 PRXQ9BXM0 1461 aa12.69□□□□□ -0.38
ZNF544-201ENST00000269829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.68□□□□□ -0.38
ZNF544-201ENST00000269829 FBLN2P98095 1184 aa12.66□□□□□ -0.38
ZNF544-201ENST00000269829 ABCA5Q8WWZ7 1642 aa12.66□□□□□ -0.38
ZNF544-201ENST00000269829 CCER1Q8TC90 406 aaPredicted RBP12.64□□□□□ -0.39
ZNF544-201ENST00000269829 ABCA10Q8WWZ4 1543 aa12.63□□□□□ -0.39
ZNF544-201ENST00000269829 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
ZNF544-201ENST00000269829 ITGAEP38570 1179 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms