RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 NISCHQ9Y2I1 1504 aa18.52■□□□□ 0.56
CALCOCO2-201ENST00000258947 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
CALCOCO2-201ENST00000258947 SHROOM4Q9ULL8 1493 aa15.88■□□□□ 0.13
CALCOCO2-201ENST00000258947 CCDC180Q9P1Z9 1646 aa15.81■□□□□ 0.12
CALCOCO2-201ENST00000258947 ZCCHC6Q5VYS8 1495 aaKnown RBP15.52■□□□□ 0.08
CALCOCO2-201ENST00000258947 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
CALCOCO2-201ENST00000258947 ABCC9O60706 1549 aa15.42■□□□□ 0.06
CALCOCO2-201ENST00000258947 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
CALCOCO2-201ENST00000258947 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
CALCOCO2-201ENST00000258947 NACADO15069 1562 aa14.86□□□□□ -0.03
CALCOCO2-201ENST00000258947 RB1CC1Q8TDY2 1594 aa14.78□□□□□ -0.04
CALCOCO2-201ENST00000258947 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
CALCOCO2-201ENST00000258947 PABPN1Q86U42 306 aaKnown RBP eCLIP14.77□□□□□ -0.05
CALCOCO2-201ENST00000258947 CHIC1Q5VXU3 224 aa14.54□□□□□ -0.08
CALCOCO2-201ENST00000258947 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
CALCOCO2-201ENST00000258947 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
CALCOCO2-201ENST00000258947 MROH2BQ7Z745 1585 aa14.4□□□□□ -0.1
CALCOCO2-201ENST00000258947 TRIM41Q8WV44 630 aa14.38□□□□□ -0.11
CALCOCO2-201ENST00000258947 EHMT2Q96KQ7 1210 aa14.37□□□□□ -0.11
CALCOCO2-201ENST00000258947 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
CALCOCO2-201ENST00000258947 BAZ1AQ9NRL2 1556 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO2-201ENST00000258947 WIZO95785 1651 aa14.27□□□□□ -0.13
CALCOCO2-201ENST00000258947 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
CALCOCO2-201ENST00000258947 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
CALCOCO2-201ENST00000258947 BICRAQ9NZM4 1560 aa14.19□□□□□ -0.14
CALCOCO2-201ENST00000258947 SMARCA4P51532 1647 aa14.17□□□□□ -0.14
CALCOCO2-201ENST00000258947 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
CALCOCO2-201ENST00000258947 TOP2AP11388 1531 aaKnown RBP14.04□□□□□ -0.16
CALCOCO2-201ENST00000258947 CCDC88BA6NC98 1476 aa14.04□□□□□ -0.16
CALCOCO2-201ENST00000258947 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
CALCOCO2-201ENST00000258947 SMARCA2P51531 1590 aa13.95□□□□□ -0.18
CALCOCO2-201ENST00000258947 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-201ENST00000258947 ABCC8Q09428 1581 aa13.89□□□□□ -0.19
CALCOCO2-201ENST00000258947 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-201ENST00000258947 PCGF6Q9BYE7 350 aa13.85□□□□□ -0.19
CALCOCO2-201ENST00000258947 RANGAP1P46060 587 aaPredicted RBP13.84□□□□□ -0.19
CALCOCO2-201ENST00000258947 WRNQ14191 1432 aaPredicted RBP eCLIP13.79□□□□□ -0.2
CALCOCO2-201ENST00000258947 PEG3Q9GZU2 1588 aa13.78□□□□□ -0.2
CALCOCO2-201ENST00000258947 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
CALCOCO2-201ENST00000258947 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-201ENST00000258947 PPARGC1BQ86YN6 1023 aaKnown RBP13.77□□□□□ -0.21
CALCOCO2-201ENST00000258947 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
CALCOCO2-201ENST00000258947 SOGA1O94964 1423 aa13.71□□□□□ -0.21
CALCOCO2-201ENST00000258947 CC2D2AQ9P2K1 1620 aa13.68□□□□□ -0.22
CALCOCO2-201ENST00000258947 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
CALCOCO2-201ENST00000258947 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
CALCOCO2-201ENST00000258947 CADPSQ9ULU8 1353 aa13.6□□□□□ -0.23
CALCOCO2-201ENST00000258947 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
CALCOCO2-201ENST00000258947 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
CALCOCO2-201ENST00000258947 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
CALCOCO2-201ENST00000258947 APLP2Q06481 763 aa13.55□□□□□ -0.24
CALCOCO2-201ENST00000258947 EEA1Q15075 1411 aa13.55□□□□□ -0.24
CALCOCO2-201ENST00000258947 CFTRP13569 1480 aa13.54□□□□□ -0.24
CALCOCO2-201ENST00000258947 NESP48681 1621 aa13.48□□□□□ -0.25
CALCOCO2-201ENST00000258947 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
CALCOCO2-201ENST00000258947 CEP162Q5TB80 1403 aa13.48□□□□□ -0.25
CALCOCO2-201ENST00000258947 FANCD2Q9BXW9 1451 aa13.46□□□□□ -0.26
CALCOCO2-201ENST00000258947 KIF27Q86VH2 1401 aa13.45□□□□□ -0.26
CALCOCO2-201ENST00000258947 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
CALCOCO2-201ENST00000258947 TNIKQ9UKE5 1360 aa13.44□□□□□ -0.26
CALCOCO2-201ENST00000258947 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO2-201ENST00000258947 CUX2O14529 1486 aa13.42□□□□□ -0.26
CALCOCO2-201ENST00000258947 CUX1P39880 1505 aa13.42□□□□□ -0.26
CALCOCO2-201ENST00000258947 TOP2BQ02880 1626 aa13.41□□□□□ -0.26
CALCOCO2-201ENST00000258947 RAPGEF2Q9Y4G8 1499 aa13.38□□□□□ -0.27
CALCOCO2-201ENST00000258947 CLIP1P30622 1438 aa13.38□□□□□ -0.27
CALCOCO2-201ENST00000258947 PDS5BQ9NTI5 1447 aa13.37□□□□□ -0.27
CALCOCO2-201ENST00000258947 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
CALCOCO2-201ENST00000258947 P3H3Q8IVL6 736 aa13.35□□□□□ -0.27
CALCOCO2-201ENST00000258947 HRCP23327 699 aa13.34□□□□□ -0.27
CALCOCO2-201ENST00000258947 RAD54L2Q9Y4B4 1467 aa13.31□□□□□ -0.28
CALCOCO2-201ENST00000258947 TDRD9Q8NDG6 1382 aaKnown RBP13.3□□□□□ -0.28
CALCOCO2-201ENST00000258947 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
CALCOCO2-201ENST00000258947 BIVM-ERCC5R4GMW8 1640 aa13.28□□□□□ -0.28
CALCOCO2-201ENST00000258947 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
CALCOCO2-201ENST00000258947 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
CALCOCO2-201ENST00000258947 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
CALCOCO2-201ENST00000258947 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
CALCOCO2-201ENST00000258947 IGF1RP08069 1367 aa13.25□□□□□ -0.29
CALCOCO2-201ENST00000258947 FBLN2P98095 1184 aa13.24□□□□□ -0.29
CALCOCO2-201ENST00000258947 LAMC3Q9Y6N6 1575 aa13.24□□□□□ -0.29
CALCOCO2-201ENST00000258947 KIF21BO75037 1637 aa13.23□□□□□ -0.29
CALCOCO2-201ENST00000258947 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-201ENST00000258947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
CALCOCO2-201ENST00000258947 DNMBPQ6XZF7 1577 aa13.2□□□□□ -0.3
CALCOCO2-201ENST00000258947 PRXQ9BXM0 1461 aa13.2□□□□□ -0.3
CALCOCO2-201ENST00000258947 ITGAEP38570 1179 aa13.19□□□□□ -0.3
CALCOCO2-201ENST00000258947 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
CALCOCO2-201ENST00000258947 VPS8Q8N3P4 1428 aa13.17□□□□□ -0.3
CALCOCO2-201ENST00000258947 PRDM2Q13029 1718 aa13.17□□□□□ -0.3
CALCOCO2-201ENST00000258947 ERICH3Q5RHP9 1530 aa13.13□□□□□ -0.31
CALCOCO2-201ENST00000258947 ZEB1P37275 1124 aaPredicted RBP13.13□□□□□ -0.31
CALCOCO2-201ENST00000258947 ARID3CA6NKF2 412 aa13.12□□□□□ -0.31
CALCOCO2-201ENST00000258947 GAPVD1Q14C86 1478 aa13.12□□□□□ -0.31
CALCOCO2-201ENST00000258947 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.311e-6■■■■□ 26.1
CALCOCO2-201ENST00000258947 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
CALCOCO2-201ENST00000258947 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
CALCOCO2-201ENST00000258947 KIF21AQ7Z4S6 1674 aa13.09□□□□□ -0.31
CALCOCO2-201ENST00000258947 CHMP7Q8WUX9 453 aaPredicted RBP13.08□□□□□ -0.32
CALCOCO2-201ENST00000258947 KANK4Q5T7N3 995 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms