RNA–Protein interactions for RNA: ENST00000241391.9

GTDC1-201, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2 BASIC

Gene GTDC1, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-201ENST00000241391 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
GTDC1-201ENST00000241391 AEBP2Q6ZN18 517 aaPredicted RBP11.82□□□□□ -0.52
GTDC1-201ENST00000241391 CHIC1Q5VXU3 224 aa11.78□□□□□ -0.52
GTDC1-201ENST00000241391 CCDC180Q9P1Z9 1646 aa11.65□□□□□ -0.55
GTDC1-201ENST00000241391 ABCC9O60706 1549 aa11.32□□□□□ -0.6
GTDC1-201ENST00000241391 DCAF8L2P0C7V8 631 aa11.25□□□□□ -0.61
GTDC1-201ENST00000241391 ZCCHC6Q5VYS8 1495 aaKnown RBP11.17□□□□□ -0.62
GTDC1-201ENST00000241391 SHROOM4Q9ULL8 1493 aa10.96□□□□□ -0.65
GTDC1-201ENST00000241391 DCAF1Q9Y4B6 1507 aa10.94□□□□□ -0.66
GTDC1-201ENST00000241391 NACADO15069 1562 aa10.9□□□□□ -0.67
GTDC1-201ENST00000241391 RB1CC1Q8TDY2 1594 aa10.87□□□□□ -0.67
GTDC1-201ENST00000241391 MYO15BQ96JP2 1530 aa10.84□□□□□ -0.67
GTDC1-201ENST00000241391 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
GTDC1-201ENST00000241391 PELP1Q8IZL8 1130 aaKnown RBP10.75□□□□□ -0.69
GTDC1-201ENST00000241391 MYT1Q01538 1121 aa10.74□□□□□ -0.69
GTDC1-201ENST00000241391 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
GTDC1-201ENST00000241391 UNC13AQ9UPW8 1703 aa10.7□□□□□ -0.7
GTDC1-201ENST00000241391 PABPN1Q86U42 306 aaKnown RBP eCLIP10.68□□□□□ -0.7
GTDC1-201ENST00000241391 PHF23Q9BUL5 403 aaPredicted RBP10.64□□□□□ -0.71
GTDC1-201ENST00000241391 BICRAQ9NZM4 1560 aa10.58□□□□□ -0.72
GTDC1-201ENST00000241391 TTBK1Q5TCY1 1321 aaPredicted RBP10.49□□□□□ -0.73
GTDC1-201ENST00000241391 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.74
GTDC1-201ENST00000241391 SUPT5HO00267 1087 aaKnown RBP10.44□□□□□ -0.74
GTDC1-201ENST00000241391 MROH2BQ7Z745 1585 aa10.35□□□□□ -0.75
GTDC1-201ENST00000241391 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
GTDC1-201ENST00000241391 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
GTDC1-201ENST00000241391 SMARCA4P51532 1647 aa10.3□□□□□ -0.76
GTDC1-201ENST00000241391 BAZ1AQ9NRL2 1556 aaPredicted RBP10.3□□□□□ -0.76
GTDC1-201ENST00000241391 EIF4G1Q04637 1599 aaKnown RBP10.28□□□□□ -0.76
GTDC1-201ENST00000241391 WIZO95785 1651 aa10.27□□□□□ -0.76
GTDC1-201ENST00000241391 POTEDQ86YR6 584 aa10.21□□□□□ -0.77
GTDC1-201ENST00000241391 CC2D2AQ9P2K1 1620 aa10.19□□□□□ -0.78
GTDC1-201ENST00000241391 APLP2Q06481 763 aa10.18□□□□□ -0.78
GTDC1-201ENST00000241391 ATAD2BQ9ULI0 1458 aa10.17□□□□□ -0.78
GTDC1-201ENST00000241391 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
GTDC1-201ENST00000241391 ERICH6Q7L0X2 663 aa10.15□□□□□ -0.78
GTDC1-201ENST00000241391 SMARCA2P51531 1590 aa10.13□□□□□ -0.79
GTDC1-201ENST00000241391 BAZ1BQ9UIG0 1483 aaKnown RBP10.13□□□□□ -0.79
GTDC1-201ENST00000241391 PEG3Q9GZU2 1588 aa10.11□□□□□ -0.79
GTDC1-201ENST00000241391 TOP2AP11388 1531 aaKnown RBP10.09□□□□□ -0.79
GTDC1-201ENST00000241391 NCAPD3P42695 1498 aa10.07□□□□□ -0.8
GTDC1-201ENST00000241391 DAXXQ9UER7 740 aaPredicted RBP10.06□□□□□ -0.8
GTDC1-201ENST00000241391 HMGXB3Q12766 1538 aa10.04□□□□□ -0.8
GTDC1-201ENST00000241391 CCDC88BA6NC98 1476 aa10.03□□□□□ -0.8
GTDC1-201ENST00000241391 NESP48681 1621 aa9.89□□□□□ -0.83
GTDC1-201ENST00000241391 CADPSQ9ULU8 1353 aa9.84□□□□□ -0.83
GTDC1-201ENST00000241391 ABCC8Q09428 1581 aa9.83□□□□□ -0.84
GTDC1-201ENST00000241391 CFTRP13569 1480 aa9.82□□□□□ -0.84
GTDC1-201ENST00000241391 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
GTDC1-201ENST00000241391 LAMC3Q9Y6N6 1575 aa9.76□□□□□ -0.85
GTDC1-201ENST00000241391 FANCD2Q9BXW9 1451 aa9.75□□□□□ -0.85
GTDC1-201ENST00000241391 PRDM2Q13029 1718 aa9.74□□□□□ -0.85
GTDC1-201ENST00000241391 KIF21AQ7Z4S6 1674 aa9.73□□□□□ -0.85
GTDC1-201ENST00000241391 BCL11AQ9H165 835 aa9.73□□□□□ -0.85
GTDC1-201ENST00000241391 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
GTDC1-201ENST00000241391 SYNJ1O43426 1573 aa9.71□□□□□ -0.86
GTDC1-201ENST00000241391 PDS5BQ9NTI5 1447 aa9.71□□□□□ -0.86
GTDC1-201ENST00000241391 PLPPR3Q6T4P5 718 aa9.7□□□□□ -0.86
GTDC1-201ENST00000241391 ERCC6Q03468 1493 aa9.7□□□□□ -0.86
GTDC1-201ENST00000241391 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
GTDC1-201ENST00000241391 CUX1P39880 1505 aa9.69□□□□□ -0.86
GTDC1-201ENST00000241391 FAM9AQ8IZU1 332 aaPredicted RBP9.68□□□□□ -0.86
GTDC1-201ENST00000241391 URB2Q14146 1524 aaKnown RBP9.65□□□□□ -0.86
GTDC1-201ENST00000241391 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
GTDC1-201ENST00000241391 TOP2BQ02880 1626 aa9.63□□□□□ -0.87
GTDC1-201ENST00000241391 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
GTDC1-201ENST00000241391 FGD5Q6ZNL6 1462 aa9.61□□□□□ -0.87
GTDC1-201ENST00000241391 MRC2Q9UBG0 1479 aa9.61□□□□□ -0.87
GTDC1-201ENST00000241391 DNMBPQ6XZF7 1577 aa9.6□□□□□ -0.87
GTDC1-201ENST00000241391 BIVM-ERCC5R4GMW8 1640 aa9.6□□□□□ -0.87
GTDC1-201ENST00000241391 EIF5BO60841 1220 aaKnown RBP9.6□□□□□ -0.87
GTDC1-201ENST00000241391 SOGA1O94964 1423 aa9.6□□□□□ -0.87
GTDC1-201ENST00000241391 SENP3Q9H4L4 574 aaPredicted RBP9.59□□□□□ -0.87
GTDC1-201ENST00000241391 RAD54L2Q9Y4B4 1467 aa9.59□□□□□ -0.87
GTDC1-201ENST00000241391 RUSC2Q8N2Y8 1516 aa9.59□□□□□ -0.87
GTDC1-201ENST00000241391 THOC2Q8NI27 1593 aaKnown RBP9.57□□□□□ -0.88
GTDC1-201ENST00000241391 POLA1P09884 1462 aaPredicted RBP9.57□□□□□ -0.88
GTDC1-201ENST00000241391 WDR62O43379 1518 aa9.55□□□□□ -0.88
GTDC1-201ENST00000241391 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
GTDC1-201ENST00000241391 CUX2O14529 1486 aa9.53□□□□□ -0.88
GTDC1-201ENST00000241391 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
GTDC1-201ENST00000241391 ZNF608Q9ULD9 1512 aaPredicted RBP9.49□□□□□ -0.89
GTDC1-201ENST00000241391 TARBP1Q13395 1621 aaKnown RBP9.48□□□□□ -0.89
GTDC1-201ENST00000241391 AQRO60306 1485 aaKnown RBP eCLIP9.48□□□□□ -0.89
GTDC1-201ENST00000241391 NCBP3Q53F19 620 aaKnown RBP9.48□□□□□ -0.89
GTDC1-201ENST00000241391 KIF27Q86VH2 1401 aa9.47□□□□□ -0.89
GTDC1-201ENST00000241391 ABCA10Q8WWZ4 1543 aa9.47□□□□□ -0.89
GTDC1-201ENST00000241391 ADRA2BP18089 450 aa9.46□□□□□ -0.9
GTDC1-201ENST00000241391 CSRNP3Q8WYN3 585 aa9.46□□□□□ -0.9
GTDC1-201ENST00000241391 WDR97A6NE52 1622 aa9.45□□□□□ -0.9
GTDC1-201ENST00000241391 IFT140Q96RY7 1462 aa9.44□□□□□ -0.9
GTDC1-201ENST00000241391 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
GTDC1-201ENST00000241391 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
GTDC1-201ENST00000241391 ABCA5Q8WWZ7 1642 aa9.41□□□□□ -0.9
GTDC1-201ENST00000241391 IGF1RP08069 1367 aa9.41□□□□□ -0.9
GTDC1-201ENST00000241391 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
GTDC1-201ENST00000241391 EEA1Q15075 1411 aa9.41□□□□□ -0.9
GTDC1-201ENST00000241391 RAPGEF2Q9Y4G8 1499 aa9.4□□□□□ -0.91
GTDC1-201ENST00000241391 UBTFP17480 764 aaKnown RBP9.39□□□□□ -0.91
GTDC1-201ENST00000241391 PBRM1Q86U86 1689 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms