RNA–Protein interactions for RNA: ENST00000229570.9

SMIM8-201, Transcript of small integral membrane protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM8, Length 2,405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-201ENST00000229570 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
SMIM8-201ENST00000229570 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
SMIM8-201ENST00000229570 ABCC9O60706 1549 aa17.21■□□□□ 0.34
SMIM8-201ENST00000229570 RB1CC1Q8TDY2 1594 aa16.77■□□□□ 0.27
SMIM8-201ENST00000229570 NACADO15069 1562 aa16.71■□□□□ 0.27
SMIM8-201ENST00000229570 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
SMIM8-201ENST00000229570 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
SMIM8-201ENST00000229570 SHROOM4Q9ULL8 1493 aa16.38■□□□□ 0.21
SMIM8-201ENST00000229570 UNC13AQ9UPW8 1703 aa16.26■□□□□ 0.19
SMIM8-201ENST00000229570 ZCCHC6Q5VYS8 1495 aaKnown RBP16.18■□□□□ 0.18
SMIM8-201ENST00000229570 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
SMIM8-201ENST00000229570 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
SMIM8-201ENST00000229570 HRCP23327 699 aa16.04■□□□□ 0.16
SMIM8-201ENST00000229570 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
SMIM8-201ENST00000229570 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
SMIM8-201ENST00000229570 PABPN1Q86U42 306 aaKnown RBP eCLIP15.84■□□□□ 0.13
SMIM8-201ENST00000229570 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
SMIM8-201ENST00000229570 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
SMIM8-201ENST00000229570 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
SMIM8-201ENST00000229570 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
SMIM8-201ENST00000229570 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
SMIM8-201ENST00000229570 MYT1Q01538 1121 aa15.54■□□□□ 0.08
SMIM8-201ENST00000229570 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
SMIM8-201ENST00000229570 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
SMIM8-201ENST00000229570 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
SMIM8-201ENST00000229570 HMGXB3Q12766 1538 aa15.31■□□□□ 0.04
SMIM8-201ENST00000229570 SMARCA2P51531 1590 aa15.29■□□□□ 0.04
SMIM8-201ENST00000229570 CUX2O14529 1486 aa15.24■□□□□ 0.03
SMIM8-201ENST00000229570 PEG3Q9GZU2 1588 aa15.24■□□□□ 0.03
SMIM8-201ENST00000229570 SMARCA4P51532 1647 aa15.21■□□□□ 0.03
SMIM8-201ENST00000229570 BAZ1AQ9NRL2 1556 aaPredicted RBP15.2■□□□□ 0.02
SMIM8-201ENST00000229570 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
SMIM8-201ENST00000229570 SUPT5HO00267 1087 aaKnown RBP15.07■□□□□ 0
SMIM8-201ENST00000229570 LAMC3Q9Y6N6 1575 aa15.05■□□□□ 0
SMIM8-201ENST00000229570 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
SMIM8-201ENST00000229570 BAZ1BQ9UIG0 1483 aaKnown RBP15.02□□□□□ -0.01
SMIM8-201ENST00000229570 ERCC6Q03468 1493 aa14.97□□□□□ -0.01
SMIM8-201ENST00000229570 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.01
SMIM8-201ENST00000229570 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
SMIM8-201ENST00000229570 TRIM26Q12899 539 aaPredicted RBP14.92□□□□□ -0.02
SMIM8-201ENST00000229570 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
SMIM8-201ENST00000229570 PDS5BQ9NTI5 1447 aa14.88□□□□□ -0.03
SMIM8-201ENST00000229570 ACIN1Q9UKV3 1341 aaKnown RBP14.87□□□□□ -0.03
SMIM8-201ENST00000229570 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
SMIM8-201ENST00000229570 NEUROD1Q13562 356 aa14.79□□□□□ -0.04
SMIM8-201ENST00000229570 CADPSQ9ULU8 1353 aa14.77□□□□□ -0.05
SMIM8-201ENST00000229570 KIF21AQ7Z4S6 1674 aa14.75□□□□□ -0.05
SMIM8-201ENST00000229570 WDR62O43379 1518 aa14.75□□□□□ -0.05
SMIM8-201ENST00000229570 NESP48681 1621 aa14.75□□□□□ -0.05
SMIM8-201ENST00000229570 GTF3C3Q9Y5Q9 886 aa14.74□□□□□ -0.05
SMIM8-201ENST00000229570 MRC2Q9UBG0 1479 aa14.73□□□□□ -0.05
SMIM8-201ENST00000229570 TTBK1Q5TCY1 1321 aaPredicted RBP14.71□□□□□ -0.06
SMIM8-201ENST00000229570 PRDM2Q13029 1718 aa14.71□□□□□ -0.06
SMIM8-201ENST00000229570 TOP2AP11388 1531 aaKnown RBP14.69□□□□□ -0.06
SMIM8-201ENST00000229570 LOC105371045A0A1W2PR82 267 aa14.67□□□□□ -0.06
SMIM8-201ENST00000229570 WIZO95785 1651 aa14.66□□□□□ -0.06
SMIM8-201ENST00000229570 CFTRP13569 1480 aa14.64□□□□□ -0.07
SMIM8-201ENST00000229570 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
SMIM8-201ENST00000229570 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
SMIM8-201ENST00000229570 RSF1Q96T23 1441 aaPredicted RBP14.57□□□□□ -0.08
SMIM8-201ENST00000229570 FANCD2Q9BXW9 1451 aa14.56□□□□□ -0.08
SMIM8-201ENST00000229570 ABCC8Q09428 1581 aa14.54□□□□□ -0.08
SMIM8-201ENST00000229570 AEBP2Q6ZN18 517 aaPredicted RBP14.53□□□□□ -0.08
SMIM8-201ENST00000229570 WDR97A6NE52 1622 aa14.45□□□□□ -0.1
SMIM8-201ENST00000229570 BCL11AQ9H165 835 aa14.44□□□□□ -0.1
SMIM8-201ENST00000229570 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
SMIM8-201ENST00000229570 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
SMIM8-201ENST00000229570 DIEXFQ68CQ4 756 aaKnown RBP14.4□□□□□ -0.1
SMIM8-201ENST00000229570 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
SMIM8-201ENST00000229570 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
SMIM8-201ENST00000229570 FAM9AQ8IZU1 332 aaPredicted RBP14.32□□□□□ -0.12
SMIM8-201ENST00000229570 TOPBP1Q92547 1522 aa14.3□□□□□ -0.12
SMIM8-201ENST00000229570 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
SMIM8-201ENST00000229570 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
SMIM8-201ENST00000229570 ANP32EQ9BTT0 268 aa14.22□□□□□ -0.13
SMIM8-201ENST00000229570 EIF4G3O43432 1585 aaKnown RBP14.21□□□□□ -0.14
SMIM8-201ENST00000229570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
SMIM8-201ENST00000229570 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
SMIM8-201ENST00000229570 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
SMIM8-201ENST00000229570 RIMBP3CA6NJZ7 1639 aa14.15□□□□□ -0.14
SMIM8-201ENST00000229570 RIMBP3BA6NNM3 1639 aa14.15□□□□□ -0.14
SMIM8-201ENST00000229570 RIMBP3Q9UFD9 1639 aa14.15□□□□□ -0.14
SMIM8-201ENST00000229570 YTHDC1Q96MU7 727 aaKnown RBP14.14□□□□□ -0.15
SMIM8-201ENST00000229570 PRKCSHP14314 528 aaPredicted RBP14.12□□□□□ -0.15
SMIM8-201ENST00000229570 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
SMIM8-201ENST00000229570 ZNF608Q9ULD9 1512 aaPredicted RBP14.11□□□□□ -0.15
SMIM8-201ENST00000229570 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
SMIM8-201ENST00000229570 CHD1O14646 1710 aa14.1□□□□□ -0.15
SMIM8-201ENST00000229570 ARHGEF11O15085 1522 aa14.08□□□□□ -0.16
SMIM8-201ENST00000229570 CSRNP3Q8WYN3 585 aa14.06□□□□□ -0.16
SMIM8-201ENST00000229570 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
SMIM8-201ENST00000229570 ZNF316A6NFI3 1004 aaPredicted RBP14.05□□□□□ -0.16
SMIM8-201ENST00000229570 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
SMIM8-201ENST00000229570 SOGA1O94964 1423 aa14.04□□□□□ -0.16
SMIM8-201ENST00000229570 GRIN2BQ13224 1484 aa14.03□□□□□ -0.16
SMIM8-201ENST00000229570 TSHZ2Q9NRE2 1034 aa14.01□□□□□ -0.17
SMIM8-201ENST00000229570 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
SMIM8-201ENST00000229570 CUX1P39880 1505 aa14□□□□□ -0.17
SMIM8-201ENST00000229570 ABCA10Q8WWZ4 1543 aa14□□□□□ -0.17
SMIM8-201ENST00000229570 PBRM1Q86U86 1689 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms