RNA–Protein interactions for RNA: ENST00000228682.6

GLI1-201, Transcript of GLI family zinc finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI1, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-201ENST00000228682 NISCHQ9Y2I1 1504 aa18.28■□□□□ 0.52
GLI1-201ENST00000228682 DCAF8L2P0C7V8 631 aa16.11■□□□□ 0.17
GLI1-201ENST00000228682 ABCC9O60706 1549 aa15.76■□□□□ 0.11
GLI1-201ENST00000228682 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
GLI1-201ENST00000228682 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
GLI1-201ENST00000228682 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
GLI1-201ENST00000228682 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
GLI1-201ENST00000228682 RB1CC1Q8TDY2 1594 aa14.92□□□□□ -0.02
GLI1-201ENST00000228682 SCRIBQ14160 1630 aa14.91□□□□□ -0.02
GLI1-201ENST00000228682 NACADO15069 1562 aa14.91□□□□□ -0.02
GLI1-201ENST00000228682 DCAF1Q9Y4B6 1507 aa14.83□□□□□ -0.03
GLI1-201ENST00000228682 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
GLI1-201ENST00000228682 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
GLI1-201ENST00000228682 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
GLI1-201ENST00000228682 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
GLI1-201ENST00000228682 BICRAQ9NZM4 1560 aa14.38□□□□□ -0.11
GLI1-201ENST00000228682 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
GLI1-201ENST00000228682 MROH2BQ7Z745 1585 aa14.22□□□□□ -0.13
GLI1-201ENST00000228682 DNAJC5BQ9UF47 199 aa14.17□□□□□ -0.14
GLI1-201ENST00000228682 BAZ1AQ9NRL2 1556 aaPredicted RBP14.14□□□□□ -0.15
GLI1-201ENST00000228682 EIF4G1Q04637 1599 aaKnown RBP14.09□□□□□ -0.15
GLI1-201ENST00000228682 WIZO95785 1651 aa14.06□□□□□ -0.16
GLI1-201ENST00000228682 SMARCA4P51532 1647 aa14.06□□□□□ -0.16
GLI1-201ENST00000228682 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
GLI1-201ENST00000228682 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
GLI1-201ENST00000228682 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
GLI1-201ENST00000228682 SMARCA2P51531 1590 aa13.9□□□□□ -0.18
GLI1-201ENST00000228682 EHMT2Q96KQ7 1210 aa13.85□□□□□ -0.19
GLI1-201ENST00000228682 NCAPD3P42695 1498 aa13.83□□□□□ -0.19
GLI1-201ENST00000228682 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
GLI1-201ENST00000228682 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
GLI1-201ENST00000228682 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
GLI1-201ENST00000228682 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
GLI1-201ENST00000228682 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
GLI1-201ENST00000228682 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
GLI1-201ENST00000228682 NESP48681 1621 aa13.68□□□□□ -0.22
GLI1-201ENST00000228682 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
GLI1-201ENST00000228682 CADPSQ9ULU8 1353 aa13.64□□□□□ -0.23
GLI1-201ENST00000228682 ERCC6Q03468 1493 aa13.58□□□□□ -0.24
GLI1-201ENST00000228682 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
GLI1-201ENST00000228682 RANGAP1P46060 587 aaPredicted RBP13.5□□□□□ -0.25
GLI1-201ENST00000228682 CFTRP13569 1480 aa13.49□□□□□ -0.25
GLI1-201ENST00000228682 PDS5BQ9NTI5 1447 aa13.49□□□□□ -0.25
GLI1-201ENST00000228682 FANCD2Q9BXW9 1451 aa13.49□□□□□ -0.25
GLI1-201ENST00000228682 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
GLI1-201ENST00000228682 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
GLI1-201ENST00000228682 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
GLI1-201ENST00000228682 FBLN2P98095 1184 aa13.38□□□□□ -0.27
GLI1-201ENST00000228682 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
GLI1-201ENST00000228682 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
GLI1-201ENST00000228682 TDRD9Q8NDG6 1382 aaKnown RBP13.31□□□□□ -0.28
GLI1-201ENST00000228682 SOGA1O94964 1423 aa13.31□□□□□ -0.28
GLI1-201ENST00000228682 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
GLI1-201ENST00000228682 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
GLI1-201ENST00000228682 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
GLI1-201ENST00000228682 CUX1P39880 1505 aa13.27□□□□□ -0.29
GLI1-201ENST00000228682 TTBK1Q5TCY1 1321 aaPredicted RBP13.27□□□□□ -0.29
GLI1-201ENST00000228682 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
GLI1-201ENST00000228682 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
GLI1-201ENST00000228682 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
GLI1-201ENST00000228682 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
GLI1-201ENST00000228682 CUX2O14529 1486 aa13.24□□□□□ -0.29
GLI1-201ENST00000228682 TOPBP1Q92547 1522 aa13.24□□□□□ -0.29
GLI1-201ENST00000228682 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
GLI1-201ENST00000228682 POLA1P09884 1462 aaPredicted RBP13.19□□□□□ -0.3
GLI1-201ENST00000228682 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
GLI1-201ENST00000228682 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
GLI1-201ENST00000228682 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
GLI1-201ENST00000228682 DNMBPQ6XZF7 1577 aa13.15□□□□□ -0.3
GLI1-201ENST00000228682 TOP2BQ02880 1626 aa13.14□□□□□ -0.31
GLI1-201ENST00000228682 P3H3Q8IVL6 736 aa13.13□□□□□ -0.31
GLI1-201ENST00000228682 ATP1B4Q9UN42 357 aaPredicted RBP13.13□□□□□ -0.31
GLI1-201ENST00000228682 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
GLI1-201ENST00000228682 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
GLI1-201ENST00000228682 CARMIL1Q5VZK9 1371 aa13.07□□□□□ -0.32
GLI1-201ENST00000228682 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
GLI1-201ENST00000228682 GAPVD1Q14C86 1478 aa13.06□□□□□ -0.32
GLI1-201ENST00000228682 IGF1RP08069 1367 aa13.05□□□□□ -0.32
GLI1-201ENST00000228682 IFT140Q96RY7 1462 aa13.03□□□□□ -0.32
GLI1-201ENST00000228682 WDR62O43379 1518 aa13.02□□□□□ -0.32
GLI1-201ENST00000228682 BIVM-ERCC5R4GMW8 1640 aa13.02□□□□□ -0.33
GLI1-201ENST00000228682 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
GLI1-201ENST00000228682 THOC2Q8NI27 1593 aaKnown RBP13□□□□□ -0.33
GLI1-201ENST00000228682 EEA1Q15075 1411 aa12.99□□□□□ -0.33
GLI1-201ENST00000228682 RAPGEF2Q9Y4G8 1499 aa12.99□□□□□ -0.33
GLI1-201ENST00000228682 ABCA10Q8WWZ4 1543 aa12.98□□□□□ -0.33
GLI1-201ENST00000228682 SNAPC4Q5SXM2 1469 aa12.94□□□□□ -0.34
GLI1-201ENST00000228682 GRIN2BQ13224 1484 aa12.94□□□□□ -0.34
GLI1-201ENST00000228682 GOLGA3Q08378 1498 aa12.93□□□□□ -0.34
GLI1-201ENST00000228682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
GLI1-201ENST00000228682 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
GLI1-201ENST00000228682 APLP2Q06481 763 aa12.92□□□□□ -0.34
GLI1-201ENST00000228682 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
GLI1-201ENST00000228682 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
GLI1-201ENST00000228682 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
GLI1-201ENST00000228682 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
GLI1-201ENST00000228682 CEP162Q5TB80 1403 aa12.84□□□□□ -0.35
GLI1-201ENST00000228682 CLIP1P30622 1438 aa12.84□□□□□ -0.35
GLI1-201ENST00000228682 PRXQ9BXM0 1461 aa12.84□□□□□ -0.35
GLI1-201ENST00000228682 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms