RNA–Protein interactions for RNA: ENSMUST00000222267.1

Gm20043-201, mousemouse

TSL 1 (best) BASIC

Gene Gm20043, Length 2,565 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20043-201ENSMUST00000222267 Chic1Q8CBW7 227 aa19.09■□□□□ 0.65
Gm20043-201ENSMUST00000222267 Plppr3Q7TPB0 716 aa18.02■□□□□ 0.48
Gm20043-201ENSMUST00000222267 Mapk8ip2Q9ERE9 830 aa17.97■□□□□ 0.47
Gm20043-201ENSMUST00000222267 Ube2uB1AUC4 352 aa17.85■□□□□ 0.45
Gm20043-201ENSMUST00000222267 Kcna4Q61423 654 aa17.79■□□□□ 0.44
Gm20043-201ENSMUST00000222267 Phf23Q8BSN5 401 aa17.69■□□□□ 0.42
Gm20043-201ENSMUST00000222267 Gab3Q8BSM5 595 aa17.12■□□□□ 0.33
Gm20043-201ENSMUST00000222267 Ppargc1bQ8VHJ7 1014 aa17.02■□□□□ 0.31
Gm20043-201ENSMUST00000222267 Senp3Q9EP97 568 aaKnown RBP16.64■□□□□ 0.25
Gm20043-201ENSMUST00000222267 Ehmt2Q9Z148 1263 aaKnown RBP16.42■□□□□ 0.22
Gm20043-201ENSMUST00000222267 Dmrt2Q8BG36 561 aa15.83■□□□□ 0.13
Gm20043-201ENSMUST00000222267 Fam71e1A1L3C1 212 aa15.81■□□□□ 0.12
Gm20043-201ENSMUST00000222267 Slc4a1apE9PX68 744 aa15.71■□□□□ 0.1
Gm20043-201ENSMUST00000222267 Prdm10Q3UTQ7 1184 aa15.13■□□□□ 0.01
Gm20043-201ENSMUST00000222267 Pde4cQ3UEI1 686 aa15.07■□□□□ 0
Gm20043-201ENSMUST00000222267 AcrbpQ3V140 540 aa15.02□□□□□ -0.01
Gm20043-201ENSMUST00000222267 Arid3aQ62431 601 aa14.91□□□□□ -0.02
Gm20043-201ENSMUST00000222267 Prdm16A2A935 1275 aa14.9□□□□□ -0.02
Gm20043-201ENSMUST00000222267 Tshz2Q68FE9 1030 aa14.9□□□□□ -0.02
Gm20043-201ENSMUST00000222267 Nlrp6Q91WS2 869 aa14.84□□□□□ -0.03
Gm20043-201ENSMUST00000222267 Ecm2Q5FW85 670 aa14.83□□□□□ -0.04
Gm20043-201ENSMUST00000222267 Atf5O70191 283 aa14.79□□□□□ -0.04
Gm20043-201ENSMUST00000222267 Npm2Q80W85 207 aa14.75□□□□□ -0.05
Gm20043-201ENSMUST00000222267 Taok2Q6ZQ29 1240 aa14.73□□□□□ -0.05
Gm20043-201ENSMUST00000222267 Rtn4Q99P72 1162 aaKnown RBP14.73□□□□□ -0.05
Gm20043-201ENSMUST00000222267 1700123L14RikQ3V2K7 440 aa14.62□□□□□ -0.07
Gm20043-201ENSMUST00000222267 Trap1aP19473 224 aa14.57□□□□□ -0.08
Gm20043-201ENSMUST00000222267 Cdca7Q9D0M2 382 aa14.56□□□□□ -0.08
Gm20043-201ENSMUST00000222267 ArxO35085 564 aa14.48□□□□□ -0.09
Gm20043-201ENSMUST00000222267 Ttbk1Q6PCN3 1308 aa14.47□□□□□ -0.09
Gm20043-201ENSMUST00000222267 Prm3Q62100 101 aa14.36□□□□□ -0.11
Gm20043-201ENSMUST00000222267 Ppp4r2Q0VGB7 417 aa14.3□□□□□ -0.12
Gm20043-201ENSMUST00000222267 Hs6st3Q9QYK4 470 aa14.11□□□□□ -0.15
Gm20043-201ENSMUST00000222267 Vsig10D3YX43 558 aa14.1□□□□□ -0.15
Gm20043-201ENSMUST00000222267 Hoxd11P23813 323 aa14.04□□□□□ -0.16
Gm20043-201ENSMUST00000222267 Styxl1Q9DAR2 321 aa14.01□□□□□ -0.17
Gm20043-201ENSMUST00000222267 CatipB9EKE5 520 aa14□□□□□ -0.17
Gm20043-201ENSMUST00000222267 DiexfQ8BTT6 772 aaKnown RBP13.99□□□□□ -0.17
Gm20043-201ENSMUST00000222267 UbtfP25976 765 aaKnown RBP13.95□□□□□ -0.18
Gm20043-201ENSMUST00000222267 Dnajc5bQ9CQ94 199 aa13.83□□□□□ -0.2
Gm20043-201ENSMUST00000222267 Esf1Q3V1V3 845 aaKnown RBP13.81□□□□□ -0.2
Gm20043-201ENSMUST00000222267 Riok3Q9DBU3 519 aaKnown RBP13.8□□□□□ -0.2
Gm20043-201ENSMUST00000222267 MyclP10166 368 aa13.78□□□□□ -0.2
Gm20043-201ENSMUST00000222267 Skap1Q3UUV5 355 aa13.69□□□□□ -0.22
Gm20043-201ENSMUST00000222267 Chrna2Q91X60 512 aa13.58□□□□□ -0.24
Gm20043-201ENSMUST00000222267 Ripply1Q2WG77 201 aa13.53□□□□□ -0.24
Gm20043-201ENSMUST00000222267 C1qtnf12Q8R2Z0 308 aa13.52□□□□□ -0.25
Gm20043-201ENSMUST00000222267 Stag3O70576 1240 aa13.46□□□□□ -0.26
Gm20043-201ENSMUST00000222267 Tcf3P15806 651 aa13.45□□□□□ -0.26
Gm20043-201ENSMUST00000222267 Ms4a5Q810P8 197 aa13.45□□□□□ -0.26
Gm20043-201ENSMUST00000222267 Mkrn3Q60764 544 aa13.43□□□□□ -0.26
Gm20043-201ENSMUST00000222267 Bach1P97302 739 aa13.42□□□□□ -0.26
Gm20043-201ENSMUST00000222267 Ppp6r1Q7TSI3 856 aa13.42□□□□□ -0.26
Gm20043-201ENSMUST00000222267 Rsph4aQ8BYM7 716 aa13.37□□□□□ -0.27
Gm20043-201ENSMUST00000222267 Zbtb38Q3LR78 1197 aa13.33□□□□□ -0.27
Gm20043-201ENSMUST00000222267 Rimbp2Q80U40 1072 aa13.27□□□□□ -0.29
Gm20043-201ENSMUST00000222267 Os9Q8K2C7 672 aa13.25□□□□□ -0.29
Gm20043-201ENSMUST00000222267 Zbtb22Q9Z0G7 638 aa13.17□□□□□ -0.3
Gm20043-201ENSMUST00000222267 Tmem132aQ922P8 1018 aa13.17□□□□□ -0.3
Gm20043-201ENSMUST00000222267 Ubap1lG3UW59 384 aa13.16□□□□□ -0.3
Gm20043-201ENSMUST00000222267 Skida1Q80YR3 822 aa13.16□□□□□ -0.3
Gm20043-201ENSMUST00000222267 WdpcpQ8C456 722 aa13.14□□□□□ -0.31
Gm20043-201ENSMUST00000222267 Znf219Q6IQX8 726 aa13.11□□□□□ -0.31
Gm20043-201ENSMUST00000222267 Q8BT18 775 aa13.03□□□□□ -0.32
Gm20043-201ENSMUST00000222267 Zeb1Q64318 1117 aa13.03□□□□□ -0.32
Gm20043-201ENSMUST00000222267 Slc4a2P13808 1237 aaKnown RBP13.02□□□□□ -0.32
Gm20043-201ENSMUST00000222267 Trim41Q5NCC3 630 aa13.02□□□□□ -0.33
Gm20043-201ENSMUST00000222267 Spryd3E9Q9B3 442 aa13.01□□□□□ -0.33
Gm20043-201ENSMUST00000222267 Dnajc5P60904 198 aa12.98□□□□□ -0.33
Gm20043-201ENSMUST00000222267 Ppp1r37Q8BKR5 712 aa12.96□□□□□ -0.33
Gm20043-201ENSMUST00000222267 Pelp1Q9DBD5 1123 aaKnown RBP12.96□□□□□ -0.34
Gm20043-201ENSMUST00000222267 NischQ80TM9 1593 aa12.91□□□□□ -0.34
Gm20043-201ENSMUST00000222267 Kdm2aP59997 1161 aa12.9□□□□□ -0.34
Gm20043-201ENSMUST00000222267 Noa1Q9JJG9 693 aaKnown RBP12.89□□□□□ -0.35
Gm20043-201ENSMUST00000222267 Scaf1Q5U4C3 1256 aaKnown RBP12.85□□□□□ -0.35
Gm20043-201ENSMUST00000222267 Spock2Q9ER58 423 aa12.83□□□□□ -0.35
Gm20043-201ENSMUST00000222267 Rad21Q61550 635 aaKnown RBP12.81□□□□□ -0.36
Gm20043-201ENSMUST00000222267 MpndQ3TV65 487 aa12.8□□□□□ -0.36
Gm20043-201ENSMUST00000222267 Npm1Q61937 292 aaKnown RBP12.78□□□□□ -0.36
Gm20043-201ENSMUST00000222267 Bcl11aQ9QYE3 773 aa12.76□□□□□ -0.37
Gm20043-201ENSMUST00000222267 VaspP70460 375 aaKnown RBP12.75□□□□□ -0.37
Gm20043-201ENSMUST00000222267 ArsiQ32KI9 573 aa12.74□□□□□ -0.37
Gm20043-201ENSMUST00000222267 TimelessQ9R1X4 1197 aa12.73□□□□□ -0.37
Gm20043-201ENSMUST00000222267 Gm13697A2AK42 830 aa12.72□□□□□ -0.37
Gm20043-201ENSMUST00000222267 Ggt6Q6PDE7 497 aa12.68□□□□□ -0.38
Gm20043-201ENSMUST00000222267 Ferd3lQ923Z4 168 aa12.67□□□□□ -0.38
Gm20043-201ENSMUST00000222267 Slc24a1Q91WD8 1130 aa12.67□□□□□ -0.38
Gm20043-201ENSMUST00000222267 PrkcshO08795 521 aa12.66□□□□□ -0.38
Gm20043-201ENSMUST00000222267 Rgl2Q61193 778 aa12.66□□□□□ -0.38
Gm20043-201ENSMUST00000222267 Zc3h15Q3TIV5 426 aaKnown RBP12.6□□□□□ -0.39
Gm20043-201ENSMUST00000222267 Ncbp3Q8BZR9 615 aaKnown RBP12.59□□□□□ -0.39
Gm20043-201ENSMUST00000222267 Gm35339A0A140LHH9 1649 aa12.58□□□□□ -0.4
Gm20043-201ENSMUST00000222267 ChgaP26339 463 aaKnown RBP12.58□□□□□ -0.4
Gm20043-201ENSMUST00000222267 P3h3Q8CG70 732 aa12.58□□□□□ -0.4
Gm20043-201ENSMUST00000222267 Plcd4Q8K3R3 807 aa12.57□□□□□ -0.4
Gm20043-201ENSMUST00000222267 Npm3Q9CPP0 175 aaKnown RBP12.56□□□□□ -0.4
Gm20043-201ENSMUST00000222267 Map4k4P97820 1233 aaKnown RBP12.53□□□□□ -0.4
Gm20043-201ENSMUST00000222267 Sox12Q04890 314 aa12.53□□□□□ -0.4
Gm20043-201ENSMUST00000222267 Abcc9P70170 1546 aa12.52□□□□□ -0.41
Gm20043-201ENSMUST00000222267 UncxO08934 530 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms