Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Gm25239-201ENSMUST00000174915 86 ntBASIC37■■■■□ 3.51
Skida1Q80YR3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Skida1Q80YR3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Skida1Q80YR3 Gm24109-201ENSMUST00000175489 103 ntBASIC32.27■■■□□ 2.76
Skida1Q80YR3 Gm15042-201ENSMUST00000120212 883 ntBASIC31.98■■■□□ 2.71
Skida1Q80YR3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Skida1Q80YR3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Skida1Q80YR3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Skida1Q80YR3 Gm15045-201ENSMUST00000117359 883 ntBASIC31.13■■■□□ 2.57
Skida1Q80YR3 Gm23366-201ENSMUST00000175022 89 ntBASIC30.9■■■□□ 2.54
Skida1Q80YR3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Skida1Q80YR3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.21■■■□□ 2.43
Skida1Q80YR3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.99■■■□□ 2.39
Skida1Q80YR3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.88■■■□□ 2.37
Skida1Q80YR3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Skida1Q80YR3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Skida1Q80YR3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Skida1Q80YR3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
Skida1Q80YR3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Skida1Q80YR3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.43■■■□□ 2.3
Skida1Q80YR3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Skida1Q80YR3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Skida1Q80YR3 Gm25238-201ENSMUST00000174914 89 ntBASIC29.28■■■□□ 2.28
Skida1Q80YR3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Skida1Q80YR3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Skida1Q80YR3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
Skida1Q80YR3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Skida1Q80YR3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Skida1Q80YR3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Skida1Q80YR3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
Skida1Q80YR3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.56■■■□□ 2.16
Skida1Q80YR3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
Skida1Q80YR3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
Skida1Q80YR3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Skida1Q80YR3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.37■■■□□ 2.13
Skida1Q80YR3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.37■■■□□ 2.13
Skida1Q80YR3 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.36■■■□□ 2.13
Skida1Q80YR3 Gm25262-201ENSMUST00000174934 133 ntBASIC28.35■■■□□ 2.13
Skida1Q80YR3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Skida1Q80YR3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Skida1Q80YR3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.1■■■□□ 2.09
Skida1Q80YR3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.1■■■□□ 2.09
Skida1Q80YR3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.94■■■□□ 2.06
Skida1Q80YR3 Gm27325-201ENSMUST00000175467 74 ntBASIC27.92■■■□□ 2.06
Skida1Q80YR3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.88■■■□□ 2.05
Skida1Q80YR3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
Skida1Q80YR3 Gm26115-201ENSMUST00000175605 87 ntBASIC27.81■■■□□ 2.04
Skida1Q80YR3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.76■■■□□ 2.03
Skida1Q80YR3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Skida1Q80YR3 Rab21-202ENSMUST00000218831 843 ntBASIC27.71■■■□□ 2.03
Skida1Q80YR3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.7■■■□□ 2.02
Skida1Q80YR3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Skida1Q80YR3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Skida1Q80YR3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Skida1Q80YR3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Skida1Q80YR3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.56■■■□□ 2
Skida1Q80YR3 Gm8109-201ENSMUST00000194076 746 ntBASIC27.56■■■□□ 2
Skida1Q80YR3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Skida1Q80YR3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Skida1Q80YR3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Skida1Q80YR3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Skida1Q80YR3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.44■■□□□ 1.98
Skida1Q80YR3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Skida1Q80YR3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Skida1Q80YR3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.27■■□□□ 1.96
Skida1Q80YR3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Skida1Q80YR3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.24■■□□□ 1.95
Skida1Q80YR3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.18■■□□□ 1.94
Skida1Q80YR3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Skida1Q80YR3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Skida1Q80YR3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Skida1Q80YR3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Skida1Q80YR3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Skida1Q80YR3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.96■■□□□ 1.91
Skida1Q80YR3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Skida1Q80YR3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.94■■□□□ 1.9
Skida1Q80YR3 Gm44487-201ENSMUST00000205145 325 ntBASIC26.89■■□□□ 1.9
Skida1Q80YR3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Skida1Q80YR3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Skida1Q80YR3 Psd-208ENSMUST00000224556 2034 ntBASIC26.86■■□□□ 1.89
Skida1Q80YR3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Skida1Q80YR3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Skida1Q80YR3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC26.83■■□□□ 1.89
Skida1Q80YR3 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.78■■□□□ 1.88
Skida1Q80YR3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Skida1Q80YR3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Skida1Q80YR3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.72■■□□□ 1.87
Skida1Q80YR3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.7■■□□□ 1.86
Skida1Q80YR3 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.65■■□□□ 1.86
Skida1Q80YR3 Gm24804-201ENSMUST00000174982 85 ntBASIC26.61■■□□□ 1.85
Skida1Q80YR3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Skida1Q80YR3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Skida1Q80YR3 Gm27322-201ENSMUST00000184007 104 ntBASIC26.57■■□□□ 1.84
Skida1Q80YR3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Skida1Q80YR3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.56■■□□□ 1.84
Skida1Q80YR3 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
Skida1Q80YR3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Skida1Q80YR3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Skida1Q80YR3 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.48■■□□□ 1.83
Skida1Q80YR3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms