RNA–Protein interactions for RNA: ENSMUST00000194418.1

Pcdhga4-201, Transcript of Protocadherin gamma-A4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhga4, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4-201ENSMUST00000194418 Rhox8Q6VSS7 320 aa20.53■□□□□ 0.88
Pcdhga4-201ENSMUST00000194418 Rpgrip1Q9EPQ2 1331 aa19.39■□□□□ 0.69
Pcdhga4-201ENSMUST00000194418 NischQ80TM9 1593 aa19.37■□□□□ 0.69
Pcdhga4-201ENSMUST00000194418 Ehmt2Q9Z148 1263 aaKnown RBP18.49■□□□□ 0.55
Pcdhga4-201ENSMUST00000194418 Ccdc136Q3TVA9 1136 aa18.47■□□□□ 0.55
Pcdhga4-201ENSMUST00000194418 Ccdc180J3QNE4 1664 aa18.38■□□□□ 0.53
Pcdhga4-201ENSMUST00000194418 Abcc9P70170 1546 aa18.37■□□□□ 0.53
Pcdhga4-201ENSMUST00000194418 Rtl1Q7M732 1744 aa18.35■□□□□ 0.53
Pcdhga4-201ENSMUST00000194418 Trim41Q5NCC3 630 aa18.26■□□□□ 0.51
Pcdhga4-201ENSMUST00000194418 Acin1Q9JIX8 1338 aaKnown RBP18.21■□□□□ 0.51
Pcdhga4-201ENSMUST00000194418 HrcG5E8J6 738 aa18.09■□□□□ 0.49
Pcdhga4-201ENSMUST00000194418 Cngb1E1AZ71 1325 aa18.05■□□□□ 0.48
Pcdhga4-201ENSMUST00000194418 Las1lA2BE28 776 aaKnown RBP18.03■□□□□ 0.48
Pcdhga4-201ENSMUST00000194418 Esf1Q3V1V3 845 aaKnown RBP17.95■□□□□ 0.46
Pcdhga4-201ENSMUST00000194418 Abcc8B2RUS7 1588 aa17.9■□□□□ 0.46
Pcdhga4-201ENSMUST00000194418 Gab3Q8BSM5 595 aa17.89■□□□□ 0.45
Pcdhga4-201ENSMUST00000194418 Zeb1Q64318 1117 aa17.8■□□□□ 0.44
Pcdhga4-201ENSMUST00000194418 Wdr66E9Q743 1299 aa17.75■□□□□ 0.43
Pcdhga4-201ENSMUST00000194418 NefmP08553 848 aa17.73■□□□□ 0.43
Pcdhga4-201ENSMUST00000194418 Gm35339A0A140LHH9 1649 aa17.68■□□□□ 0.42
Pcdhga4-201ENSMUST00000194418 Npm2Q80W85 207 aa17.54■□□□□ 0.4
Pcdhga4-201ENSMUST00000194418 Pcgf6Q99NA9 353 aa17.53■□□□□ 0.4
Pcdhga4-201ENSMUST00000194418 Myt1lP97500 1187 aa17.45■□□□□ 0.38
Pcdhga4-201ENSMUST00000194418 Zcchc6Q5BLK4 1491 aaKnown RBP17.43■□□□□ 0.38
Pcdhga4-201ENSMUST00000194418 UbtfP25976 765 aaKnown RBP17.34■□□□□ 0.37
Pcdhga4-201ENSMUST00000194418 Dcaf1Q80TR8 1506 aa17.23■□□□□ 0.35
Pcdhga4-201ENSMUST00000194418 CenpbP27790 599 aa17.21■□□□□ 0.35
Pcdhga4-201ENSMUST00000194418 Pelp1Q9DBD5 1123 aaKnown RBP17.2■□□□□ 0.34
Pcdhga4-201ENSMUST00000194418 Ube2uB1AUC4 352 aa17.19■□□□□ 0.34
Pcdhga4-201ENSMUST00000194418 Supt5hO55201 1082 aaKnown RBP17.14■□□□□ 0.33
Pcdhga4-201ENSMUST00000194418 Cdk11bP24788 784 aaKnown RBP17.1■□□□□ 0.33
Pcdhga4-201ENSMUST00000194418 Stra8P70278 393 aa17.08■□□□□ 0.32
Pcdhga4-201ENSMUST00000194418 Cep164Q5DU05 1446 aa17.03■□□□□ 0.32
Pcdhga4-201ENSMUST00000194418 Rb1cc1Q9ESK9 1588 aa17.01■□□□□ 0.31
Pcdhga4-201ENSMUST00000194418 Mier1Q5UAK0 511 aa17■□□□□ 0.31
Pcdhga4-201ENSMUST00000194418 Nop58Q6DFW4 536 aaKnown RBP16.95■□□□□ 0.3
Pcdhga4-201ENSMUST00000194418 Brd4Q9ESU6 1400 aaKnown RBP16.9■□□□□ 0.3
Pcdhga4-201ENSMUST00000194418 Myt1Q8CFC2 1127 aa16.88■□□□□ 0.29
Pcdhga4-201ENSMUST00000194418 TonslQ6NZL6 1363 aa16.86■□□□□ 0.29
Pcdhga4-201ENSMUST00000194418 Tnnt3Q9QZ47 272 aa16.84■□□□□ 0.29
Pcdhga4-201ENSMUST00000194418 Il27Q8K3I6 234 aa16.81■□□□□ 0.28
Pcdhga4-201ENSMUST00000194418 Baz1aO88379 1555 aa16.75■□□□□ 0.27
Pcdhga4-201ENSMUST00000194418 Chic1Q8CBW7 227 aa16.74■□□□□ 0.27
Pcdhga4-201ENSMUST00000194418 ClspnQ80YR7 1315 aa16.73■□□□□ 0.27
Pcdhga4-201ENSMUST00000194418 NacadQ5SWP3 1504 aa16.68■□□□□ 0.26
Pcdhga4-201ENSMUST00000194418 Fam50aQ9WV03 339 aaKnown RBP16.67■□□□□ 0.26
Pcdhga4-201ENSMUST00000194418 NclP09405 707 aaKnown RBP16.66■□□□□ 0.26
Pcdhga4-201ENSMUST00000194418 Ap3b1Q9Z1T1 1105 aa16.66■□□□□ 0.26
Pcdhga4-201ENSMUST00000194418 Neurod1Q60867 357 aa16.64■□□□□ 0.25
Pcdhga4-201ENSMUST00000194418 Ppargc1bQ8VHJ7 1014 aa16.61■□□□□ 0.25
Pcdhga4-201ENSMUST00000194418 Slc24a1Q91WD8 1130 aa16.6■□□□□ 0.25
Pcdhga4-201ENSMUST00000194418 Sall2Q9QX96 1004 aa16.6■□□□□ 0.25
Pcdhga4-201ENSMUST00000194418 Anks4bQ8K3X6 423 aa16.56■□□□□ 0.24
Pcdhga4-201ENSMUST00000194418 Plekhg3Q4VAC9 1341 aa16.54■□□□□ 0.24
Pcdhga4-201ENSMUST00000194418 Clip1Q922J3 1391 aa16.49■□□□□ 0.23
Pcdhga4-201ENSMUST00000194418 NrdcQ8BHG1 1161 aa16.48■□□□□ 0.23
Pcdhga4-201ENSMUST00000194418 Golga3P55937 1487 aa16.47■□□□□ 0.23
Pcdhga4-201ENSMUST00000194418 Kdm5dQ62240 1548 aa16.42■□□□□ 0.22
Pcdhga4-201ENSMUST00000194418 Anp32bQ9EST5 272 aaKnown RBP16.38■□□□□ 0.21
Pcdhga4-201ENSMUST00000194418 Rtl5Q5DTT4 599 aa16.36■□□□□ 0.21
Pcdhga4-201ENSMUST00000194418 Aplp2Q06335 707 aa16.34■□□□□ 0.21
Pcdhga4-201ENSMUST00000194418 Npm1Q61937 292 aaKnown RBP16.34■□□□□ 0.21
Pcdhga4-201ENSMUST00000194418 Rsf1E9PWW9 1441 aaKnown RBP16.33■□□□□ 0.2
Pcdhga4-201ENSMUST00000194418 Lmod2Q3UHZ5 550 aa16.3■□□□□ 0.2
Pcdhga4-201ENSMUST00000194418 Ccer2J3QPU5 274 aa16.3■□□□□ 0.2
Pcdhga4-201ENSMUST00000194418 Csrnp3P59055 597 aa16.28■□□□□ 0.2
Pcdhga4-201ENSMUST00000194418 Eif5bQ05D44 1216 aaKnown RBP16.26■□□□□ 0.19
Pcdhga4-201ENSMUST00000194418 Eid3Q3V124 375 aa16.26■□□□□ 0.19
Pcdhga4-201ENSMUST00000194418 Anp32aO35381 247 aa16.24■□□□□ 0.19
Pcdhga4-201ENSMUST00000194418 Crybg2B7ZCC2 1516 aa16.23■□□□□ 0.19
Pcdhga4-201ENSMUST00000194418 NeflP08551 543 aa16.21■□□□□ 0.19
Pcdhga4-201ENSMUST00000194418 Amer1Q7TS75 1132 aa16.13■□□□□ 0.17
Pcdhga4-201ENSMUST00000194418 Aebp2Q9Z248 504 aaKnown RBP16.12■□□□□ 0.17
Pcdhga4-201ENSMUST00000194418 Ccdc88bQ4QRL3 1481 aa16.09■□□□□ 0.17
Pcdhga4-201ENSMUST00000194418 Setd5Q5XJV7 1441 aa16.08■□□□□ 0.17
Pcdhga4-201ENSMUST00000194418 BlmO88700 1416 aa16.07■□□□□ 0.16
Pcdhga4-201ENSMUST00000194418 Mapk8ip2Q9ERE9 830 aa16.05■□□□□ 0.16
Pcdhga4-201ENSMUST00000194418 ScribQ80U72 1612 aa16.04■□□□□ 0.16
Pcdhga4-201ENSMUST00000194418 Smarca2Q6DIC0 1577 aa16.03■□□□□ 0.16
Pcdhga4-201ENSMUST00000194418 Eea1Q8BL66 1411 aa16.03■□□□□ 0.16
Pcdhga4-201ENSMUST00000194418 1700123L14RikQ3V2K7 440 aa16.02■□□□□ 0.15
Pcdhga4-201ENSMUST00000194418 Sycp2Q9CUU3 1500 aa15.99■□□□□ 0.15
Pcdhga4-201ENSMUST00000194418 Gm38655A0A286YDK6 273 aa15.99■□□□□ 0.15
Pcdhga4-201ENSMUST00000194418 Ttbk1Q6PCN3 1308 aa15.98■□□□□ 0.15
Pcdhga4-201ENSMUST00000194418 4933416C03RikQ3V063 378 aa15.98■□□□□ 0.15
Pcdhga4-201ENSMUST00000194418 Calr4Q3TQS0 420 aa15.96■□□□□ 0.14
Pcdhga4-201ENSMUST00000194418 Fmn1Q05860 1466 aa15.95■□□□□ 0.14
Pcdhga4-201ENSMUST00000194418 Os9Q8K2C7 672 aa15.94■□□□□ 0.14
Pcdhga4-201ENSMUST00000194418 Cep162Q6ZQ06 1403 aa15.93■□□□□ 0.14
Pcdhga4-201ENSMUST00000194418 Ubl4bQ9CQ84 188 aa15.89■□□□□ 0.13
Pcdhga4-201ENSMUST00000194418 Kif15Q6P9L6 1387 aa15.89■□□□□ 0.13
Pcdhga4-201ENSMUST00000194418 CftrP26361 1476 aa15.87■□□□□ 0.13
Pcdhga4-201ENSMUST00000194418 DiexfQ8BTT6 772 aaKnown RBP15.84■□□□□ 0.13
Pcdhga4-201ENSMUST00000194418 Hdac5Q9Z2V6 1113 aa15.83■□□□□ 0.13
Pcdhga4-201ENSMUST00000194418 Ccdc18Q640L5 1455 aa15.83■□□□□ 0.12
Pcdhga4-201ENSMUST00000194418 Chic2Q9D9G3 165 aa15.82■□□□□ 0.12
Pcdhga4-201ENSMUST00000194418 Mrs2Q5NCE8 434 aa15.81■□□□□ 0.12
Pcdhga4-201ENSMUST00000194418 Cecr2E9Q2Z1 1453 aa15.8■□□□□ 0.12
Pcdhga4-201ENSMUST00000194418 Wdr43Q6ZQL4 677 aaKnown RBP15.78■□□□□ 0.12
Pcdhga4-201ENSMUST00000194418 Ppp4r2Q0VGB7 417 aa15.77■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms