RNA–Protein interactions for RNA: ENSMUST00000189150.1

Gm28856-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28856, Length 2,828 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28856-201ENSMUST00000189150 Chic1Q8CBW7 227 aa19.19■□□□□ 0.66
Gm28856-201ENSMUST00000189150 Mapk8ip2Q9ERE9 830 aa18.14■□□□□ 0.5
Gm28856-201ENSMUST00000189150 Phf23Q8BSN5 401 aa17.21■□□□□ 0.35
Gm28856-201ENSMUST00000189150 Plppr3Q7TPB0 716 aa17.04■□□□□ 0.32
Gm28856-201ENSMUST00000189150 Gab3Q8BSM5 595 aa16.69■□□□□ 0.26
Gm28856-201ENSMUST00000189150 Senp3Q9EP97 568 aaKnown RBP15.99■□□□□ 0.15
Gm28856-201ENSMUST00000189150 Kcna4Q61423 654 aa15.81■□□□□ 0.12
Gm28856-201ENSMUST00000189150 Ppargc1bQ8VHJ7 1014 aa14.22□□□□□ -0.13
Gm28856-201ENSMUST00000189150 Trap1aP19473 224 aa14.18□□□□□ -0.14
Gm28856-201ENSMUST00000189150 Dmrt2Q8BG36 561 aa14.18□□□□□ -0.14
Gm28856-201ENSMUST00000189150 Hoxd11P23813 323 aa13.96□□□□□ -0.17
Gm28856-201ENSMUST00000189150 Slc4a1apE9PX68 744 aa13.88□□□□□ -0.19
Gm28856-201ENSMUST00000189150 Ube2uB1AUC4 352 aa13.61□□□□□ -0.23
Gm28856-201ENSMUST00000189150 Chrna2Q91X60 512 aa13.37□□□□□ -0.27
Gm28856-201ENSMUST00000189150 Znf219Q6IQX8 726 aa13.36□□□□□ -0.27
Gm28856-201ENSMUST00000189150 Dnajc5bQ9CQ94 199 aa13.35□□□□□ -0.27
Gm28856-201ENSMUST00000189150 NischQ80TM9 1593 aa13.3□□□□□ -0.28
Gm28856-201ENSMUST00000189150 Fam163aQ8CAA5 168 aa13.28□□□□□ -0.28
Gm28856-201ENSMUST00000189150 Atf5O70191 283 aa13.23□□□□□ -0.29
Gm28856-201ENSMUST00000189150 Ppp4r2Q0VGB7 417 aa13.23□□□□□ -0.29
Gm28856-201ENSMUST00000189150 Rsph4aQ8BYM7 716 aa13.21□□□□□ -0.29
Gm28856-201ENSMUST00000189150 Hs6st3Q9QYK4 470 aa13.21□□□□□ -0.3
Gm28856-201ENSMUST00000189150 Fam71e1A1L3C1 212 aa13.06□□□□□ -0.32
Gm28856-201ENSMUST00000189150 1700123L14RikQ3V2K7 440 aa13.03□□□□□ -0.32
Gm28856-201ENSMUST00000189150 Gm35339A0A140LHH9 1649 aa12.98□□□□□ -0.33
Gm28856-201ENSMUST00000189150 Rimbp2Q80U40 1072 aa12.98□□□□□ -0.33
Gm28856-201ENSMUST00000189150 Abcc9P70170 1546 aa12.81□□□□□ -0.36
Gm28856-201ENSMUST00000189150 Nlrp6Q91WS2 869 aa12.75□□□□□ -0.37
Gm28856-201ENSMUST00000189150 Abcc8B2RUS7 1588 aa12.69□□□□□ -0.38
Gm28856-201ENSMUST00000189150 AcrbpQ3V140 540 aa12.66□□□□□ -0.38
Gm28856-201ENSMUST00000189150 Cdca7Q9D0M2 382 aa12.65□□□□□ -0.38
Gm28856-201ENSMUST00000189150 Akt1s1Q9D1F4 257 aa12.6□□□□□ -0.39
Gm28856-201ENSMUST00000189150 Pde4cQ3UEI1 686 aa12.56□□□□□ -0.4
Gm28856-201ENSMUST00000189150 Rpgrip1Q9EPQ2 1331 aa12.53□□□□□ -0.4
Gm28856-201ENSMUST00000189150 Slc34a2Q9DBP0 697 aa12.51□□□□□ -0.41
Gm28856-201ENSMUST00000189150 Bach1P97302 739 aa12.49□□□□□ -0.41
Gm28856-201ENSMUST00000189150 Rtn4Q99P72 1162 aaKnown RBP12.45□□□□□ -0.42
Gm28856-201ENSMUST00000189150 ArsiQ32KI9 573 aa12.44□□□□□ -0.42
Gm28856-201ENSMUST00000189150 Sox12Q04890 314 aa12.38□□□□□ -0.43
Gm28856-201ENSMUST00000189150 Prm3Q62100 101 aa12.38□□□□□ -0.43
Gm28856-201ENSMUST00000189150 C1qtnf12Q8R2Z0 308 aa12.37□□□□□ -0.43
Gm28856-201ENSMUST00000189150 Ehmt2Q9Z148 1263 aaKnown RBP12.37□□□□□ -0.43
Gm28856-201ENSMUST00000189150 Rhox8Q6VSS7 320 aa12.35□□□□□ -0.43
Gm28856-201ENSMUST00000189150 Npm2Q80W85 207 aa12.34□□□□□ -0.43
Gm28856-201ENSMUST00000189150 WdpcpQ8C456 722 aa12.29□□□□□ -0.44
Gm28856-201ENSMUST00000189150 Riok3Q9DBU3 519 aaKnown RBP12.22□□□□□ -0.45
Gm28856-201ENSMUST00000189150 MyclP10166 368 aa12.2□□□□□ -0.46
Gm28856-201ENSMUST00000189150 Tshz2Q68FE9 1030 aa12.2□□□□□ -0.46
Gm28856-201ENSMUST00000189150 Rtl1Q7M732 1744 aa12.15□□□□□ -0.46
Gm28856-201ENSMUST00000189150 Styxl1Q9DAR2 321 aa12.07□□□□□ -0.48
Gm28856-201ENSMUST00000189150 Trim41Q5NCC3 630 aa12.06□□□□□ -0.48
Gm28856-201ENSMUST00000189150 ScribQ80U72 1612 aa12□□□□□ -0.49
Gm28856-201ENSMUST00000189150 Ccdc180J3QNE4 1664 aa11.87□□□□□ -0.51
Gm28856-201ENSMUST00000189150 Ifnlr1Q8CGK5 535 aa11.87□□□□□ -0.51
Gm28856-201ENSMUST00000189150 Ecm2Q5FW85 670 aa11.85□□□□□ -0.51
Gm28856-201ENSMUST00000189150 Ms4a5Q810P8 197 aa11.85□□□□□ -0.51
Gm28856-201ENSMUST00000189150 G430095P16RikE9Q913 147 aa11.82□□□□□ -0.52
Gm28856-201ENSMUST00000189150 Kdm5dQ62240 1548 aa11.74□□□□□ -0.53
Gm28856-201ENSMUST00000189150 Prdm10Q3UTQ7 1184 aa11.73□□□□□ -0.53
Gm28856-201ENSMUST00000189150 Acin1Q9JIX8 1338 aaKnown RBP11.67□□□□□ -0.54
Gm28856-201ENSMUST00000189150 Zbtb12Q9Z150 459 aa11.67□□□□□ -0.54
Gm28856-201ENSMUST00000189150 NacadQ5SWP3 1504 aa11.63□□□□□ -0.55
Gm28856-201ENSMUST00000189150 Rb1cc1Q9ESK9 1588 aa11.63□□□□□ -0.55
Gm28856-201ENSMUST00000189150 Myt1Q8CFC2 1127 aa11.61□□□□□ -0.55
Gm28856-201ENSMUST00000189150 Egfem1Q8C088 590 aa11.6□□□□□ -0.55
Gm28856-201ENSMUST00000189150 Zbtb7aO88939 569 aaKnown RBP11.59□□□□□ -0.55
Gm28856-201ENSMUST00000189150 Dcaf1Q80TR8 1506 aa11.58□□□□□ -0.56
Gm28856-201ENSMUST00000189150 Tcf3P15806 651 aa11.57□□□□□ -0.56
Gm28856-201ENSMUST00000189150 Ccdc136Q3TVA9 1136 aa11.55□□□□□ -0.56
Gm28856-201ENSMUST00000189150 Grwd1Q810D6 446 aaKnown RBP11.54□□□□□ -0.56
Gm28856-201ENSMUST00000189150 Ttbk1Q6PCN3 1308 aa11.52□□□□□ -0.56
Gm28856-201ENSMUST00000189150 Rnf216P58283 853 aa11.51□□□□□ -0.57
Gm28856-201ENSMUST00000189150 Pcgf6Q99NA9 353 aa11.49□□□□□ -0.57
Gm28856-201ENSMUST00000189150 Fbln2P37889 1221 aa11.46□□□□□ -0.58
Gm28856-201ENSMUST00000189150 MpndQ3TV65 487 aa11.46□□□□□ -0.58
Gm28856-201ENSMUST00000189150 Gtpbp6Q3U6U5 514 aa11.45□□□□□ -0.58
Gm28856-201ENSMUST00000189150 Zcchc6Q5BLK4 1491 aaKnown RBP11.44□□□□□ -0.58
Gm28856-201ENSMUST00000189150 Las1lA2BE28 776 aaKnown RBP11.43□□□□□ -0.58
Gm28856-201ENSMUST00000189150 CatipB9EKE5 520 aa11.43□□□□□ -0.58
Gm28856-201ENSMUST00000189150 Baz1aO88379 1555 aa11.42□□□□□ -0.58
Gm28856-201ENSMUST00000189150 Sycp2Q9CUU3 1500 aa11.4□□□□□ -0.58
Gm28856-201ENSMUST00000189150 Npm3Q9CPP0 175 aaKnown RBP11.39□□□□□ -0.59
Gm28856-201ENSMUST00000189150 DiexfQ8BTT6 772 aaKnown RBP11.35□□□□□ -0.59
Gm28856-201ENSMUST00000189150 Abcb7Q61102 752 aaKnown RBP11.33□□□□□ -0.6
Gm28856-201ENSMUST00000189150 Skida1Q80YR3 822 aa11.31□□□□□ -0.6
Gm28856-201ENSMUST00000189150 Ppp1r37Q8BKR5 712 aa11.29□□□□□ -0.6
Gm28856-201ENSMUST00000189150 ArxO35085 564 aa11.25□□□□□ -0.61
Gm28856-201ENSMUST00000189150 Arid3aQ62431 601 aa11.23□□□□□ -0.61
Gm28856-201ENSMUST00000189150 BicraF8VPZ9 1578 aa11.23□□□□□ -0.61
Gm28856-201ENSMUST00000189150 Nkx1-1G3UXB3 402 aa11.22□□□□□ -0.61
Gm28856-201ENSMUST00000189150 Znf704Q9ERQ3 566 aa11.17□□□□□ -0.62
Gm28856-201ENSMUST00000189150 CenpbP27790 599 aa11.17□□□□□ -0.62
Gm28856-201ENSMUST00000189150 Cecr2E9Q2Z1 1453 aa11.15□□□□□ -0.62
Gm28856-201ENSMUST00000189150 Crybg2B7ZCC2 1516 aa11.15□□□□□ -0.63
Gm28856-201ENSMUST00000189150 Slc4a5E9Q3M5 1116 aa11.13□□□□□ -0.63
Gm28856-201ENSMUST00000189150 Smarca2Q6DIC0 1577 aa11.12□□□□□ -0.63
Gm28856-201ENSMUST00000189150 Prdm16A2A935 1275 aa11.11□□□□□ -0.63
Gm28856-201ENSMUST00000189150 Cngb1E1AZ71 1325 aa11.08□□□□□ -0.64
Gm28856-201ENSMUST00000189150 Lrrc43Q3V0L5 667 aa11.06□□□□□ -0.64
Gm28856-201ENSMUST00000189150 Spock2Q9ER58 423 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 36.7 ms