Protein–RNA interactions for Protein: P58283

Rnf216, E3 ubiquitin-protein ligase RNF216, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf216P58283 Gm25239-201ENSMUST00000174915 86 ntBASIC44.06■■■■■ 4.64
Rnf216P58283 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
Rnf216P58283 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.22■■■■■ 4.03
Rnf216P58283 Gm15042-201ENSMUST00000120212 883 ntBASIC38.62■■■■□ 3.77
Rnf216P58283 Gm24109-201ENSMUST00000175489 103 ntBASIC38.09■■■■□ 3.69
Rnf216P58283 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
Rnf216P58283 Gm15045-201ENSMUST00000117359 883 ntBASIC37.74■■■■□ 3.63
Rnf216P58283 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
Rnf216P58283 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Rnf216P58283 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
Rnf216P58283 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
Rnf216P58283 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.9■■■■□ 3.5
Rnf216P58283 Gm23366-201ENSMUST00000175022 89 ntBASIC36.88■■■■□ 3.49
Rnf216P58283 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
Rnf216P58283 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Rnf216P58283 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC36.04■■■■□ 3.36
Rnf216P58283 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.83■■■■□ 3.33
Rnf216P58283 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.71■■■■□ 3.31
Rnf216P58283 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.7■■■■□ 3.31
Rnf216P58283 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
Rnf216P58283 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.47■■■■□ 3.27
Rnf216P58283 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
Rnf216P58283 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Rnf216P58283 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.25■■■■□ 3.23
Rnf216P58283 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rnf216P58283 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.2■■■■□ 3.23
Rnf216P58283 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.14■■■■□ 3.22
Rnf216P58283 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35.12■■■■□ 3.21
Rnf216P58283 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.1■■■■□ 3.21
Rnf216P58283 Psd-208ENSMUST00000224556 2034 ntBASIC34.98■■■■□ 3.19
Rnf216P58283 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Rnf216P58283 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Rnf216P58283 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Rnf216P58283 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Rnf216P58283 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.8■■■■□ 3.16
Rnf216P58283 Gm25238-201ENSMUST00000174914 89 ntBASIC34.73■■■■□ 3.15
Rnf216P58283 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Rnf216P58283 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.5■■■■□ 3.11
Rnf216P58283 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Rnf216P58283 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.18■■■■□ 3.06
Rnf216P58283 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Rnf216P58283 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC34.09■■■■□ 3.05
Rnf216P58283 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Rnf216P58283 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34.01■■■■□ 3.03
Rnf216P58283 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.93■■■■□ 3.02
Rnf216P58283 Gm27325-201ENSMUST00000175467 74 ntBASIC33.88■■■■□ 3.01
Rnf216P58283 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
Rnf216P58283 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Rnf216P58283 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.81■■■■□ 3
Rnf216P58283 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.72■■■□□ 2.99
Rnf216P58283 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Rnf216P58283 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.62■■■□□ 2.97
Rnf216P58283 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC33.52■■■□□ 2.96
Rnf216P58283 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33.48■■■□□ 2.95
Rnf216P58283 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33.47■■■□□ 2.95
Rnf216P58283 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC33.44■■■□□ 2.94
Rnf216P58283 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
Rnf216P58283 Gm25262-201ENSMUST00000174934 133 ntBASIC33.3■■■□□ 2.92
Rnf216P58283 Rab21-202ENSMUST00000218831 843 ntBASIC33.22■■■□□ 2.91
Rnf216P58283 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Rnf216P58283 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Rnf216P58283 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Rnf216P58283 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC33.15■■■□□ 2.9
Rnf216P58283 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Rnf216P58283 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC33.11■■■□□ 2.89
Rnf216P58283 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Rnf216P58283 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Rnf216P58283 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Rnf216P58283 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Rnf216P58283 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Rnf216P58283 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.94■■■□□ 2.86
Rnf216P58283 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.94■■■□□ 2.86
Rnf216P58283 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Rnf216P58283 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Rnf216P58283 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.82■■■□□ 2.84
Rnf216P58283 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Rnf216P58283 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Rnf216P58283 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Rnf216P58283 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Rnf216P58283 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Rnf216P58283 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rnf216P58283 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Rnf216P58283 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.63■■■□□ 2.81
Rnf216P58283 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.6■■■□□ 2.81
Rnf216P58283 CT025624.2-201ENSMUST00000223609 1909 ntBASIC32.58■■■□□ 2.81
Rnf216P58283 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.8
Rnf216P58283 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.49■■■□□ 2.79
Rnf216P58283 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rnf216P58283 Gm42596-201ENSMUST00000196305 1958 ntBASIC32.47■■■□□ 2.79
Rnf216P58283 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rnf216P58283 Gm26115-201ENSMUST00000175605 87 ntBASIC32.43■■■□□ 2.78
Rnf216P58283 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rnf216P58283 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rnf216P58283 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rnf216P58283 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Rnf216P58283 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.33■■■□□ 2.77
Rnf216P58283 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.32■■■□□ 2.76
Rnf216P58283 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Rnf216P58283 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rnf216P58283 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.21■■■□□ 2.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms