RNA–Protein interactions for RNA: ENSMUST00000188417.1

Gm28718-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28718, Length 2,168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28718-201ENSMUST00000188417 Chic1Q8CBW7 227 aa18.91■□□□□ 0.62
Gm28718-201ENSMUST00000188417 Mapk8ip2Q9ERE9 830 aa18.48■□□□□ 0.55
Gm28718-201ENSMUST00000188417 Phf23Q8BSN5 401 aa17.12■□□□□ 0.33
Gm28718-201ENSMUST00000188417 Plppr3Q7TPB0 716 aa16.41■□□□□ 0.22
Gm28718-201ENSMUST00000188417 Gab3Q8BSM5 595 aa16.26■□□□□ 0.19
Gm28718-201ENSMUST00000188417 Senp3Q9EP97 568 aaKnown RBP15.63■□□□□ 0.09
Gm28718-201ENSMUST00000188417 Kcna4Q61423 654 aa15.09■□□□□ 0.01
Gm28718-201ENSMUST00000188417 Rpgrip1Q9EPQ2 1331 aa13.8□□□□□ -0.2
Gm28718-201ENSMUST00000188417 Hoxd11P23813 323 aa13.76□□□□□ -0.21
Gm28718-201ENSMUST00000188417 Trap1aP19473 224 aa13.69□□□□□ -0.22
Gm28718-201ENSMUST00000188417 Fam163aQ8CAA5 168 aa13.64□□□□□ -0.23
Gm28718-201ENSMUST00000188417 Dmrt2Q8BG36 561 aa13.44□□□□□ -0.26
Gm28718-201ENSMUST00000188417 Ppargc1bQ8VHJ7 1014 aa13.23□□□□□ -0.29
Gm28718-201ENSMUST00000188417 Znf219Q6IQX8 726 aa13.17□□□□□ -0.3
Gm28718-201ENSMUST00000188417 Rtl1Q7M732 1744 aa13.12□□□□□ -0.31
Gm28718-201ENSMUST00000188417 Acin1Q9JIX8 1338 aaKnown RBP13.07□□□□□ -0.32
Gm28718-201ENSMUST00000188417 Ccdc180J3QNE4 1664 aa12.98□□□□□ -0.33
Gm28718-201ENSMUST00000188417 Chrna2Q91X60 512 aa12.97□□□□□ -0.33
Gm28718-201ENSMUST00000188417 Pcgf6Q99NA9 353 aa12.97□□□□□ -0.33
Gm28718-201ENSMUST00000188417 Atf5O70191 283 aa12.87□□□□□ -0.35
Gm28718-201ENSMUST00000188417 Rsph4aQ8BYM7 716 aa12.87□□□□□ -0.35
Gm28718-201ENSMUST00000188417 Rimbp2Q80U40 1072 aa12.77□□□□□ -0.36
Gm28718-201ENSMUST00000188417 Slc4a1apE9PX68 744 aa12.76□□□□□ -0.37
Gm28718-201ENSMUST00000188417 Myt1Q8CFC2 1127 aa12.73□□□□□ -0.37
Gm28718-201ENSMUST00000188417 Las1lA2BE28 776 aaKnown RBP12.69□□□□□ -0.38
Gm28718-201ENSMUST00000188417 Dnajc5bQ9CQ94 199 aa12.65□□□□□ -0.38
Gm28718-201ENSMUST00000188417 NischQ80TM9 1593 aa12.62□□□□□ -0.39
Gm28718-201ENSMUST00000188417 Trim41Q5NCC3 630 aa12.57□□□□□ -0.4
Gm28718-201ENSMUST00000188417 ArsiQ32KI9 573 aa12.54□□□□□ -0.4
Gm28718-201ENSMUST00000188417 Hs6st3Q9QYK4 470 aa12.54□□□□□ -0.4
Gm28718-201ENSMUST00000188417 Dcaf1Q80TR8 1506 aa12.54□□□□□ -0.4
Gm28718-201ENSMUST00000188417 Ppp4r2Q0VGB7 417 aa12.53□□□□□ -0.4
Gm28718-201ENSMUST00000188417 Neurod1Q60867 357 aa12.5□□□□□ -0.41
Gm28718-201ENSMUST00000188417 Gm35339A0A140LHH9 1649 aa12.49□□□□□ -0.41
Gm28718-201ENSMUST00000188417 CenpbP27790 599 aa12.48□□□□□ -0.41
Gm28718-201ENSMUST00000188417 Akt1s1Q9D1F4 257 aa12.46□□□□□ -0.42
Gm28718-201ENSMUST00000188417 Supt5hO55201 1082 aaKnown RBP12.4□□□□□ -0.42
Gm28718-201ENSMUST00000188417 Ube2uB1AUC4 352 aa12.35□□□□□ -0.43
Gm28718-201ENSMUST00000188417 Abcc9P70170 1546 aa12.34□□□□□ -0.43
Gm28718-201ENSMUST00000188417 DiexfQ8BTT6 772 aaKnown RBP12.33□□□□□ -0.44
Gm28718-201ENSMUST00000188417 1700123L14RikQ3V2K7 440 aa12.33□□□□□ -0.44
Gm28718-201ENSMUST00000188417 Zcchc6Q5BLK4 1491 aaKnown RBP12.29□□□□□ -0.44
Gm28718-201ENSMUST00000188417 Rhox8Q6VSS7 320 aa12.27□□□□□ -0.45
Gm28718-201ENSMUST00000188417 Anks4bQ8K3X6 423 aa12.22□□□□□ -0.45
Gm28718-201ENSMUST00000188417 HrcG5E8J6 738 aa12.21□□□□□ -0.45
Gm28718-201ENSMUST00000188417 Slc34a2Q9DBP0 697 aa12.21□□□□□ -0.45
Gm28718-201ENSMUST00000188417 Ehmt2Q9Z148 1263 aaKnown RBP12.21□□□□□ -0.45
Gm28718-201ENSMUST00000188417 Bach1P97302 739 aa12.2□□□□□ -0.46
Gm28718-201ENSMUST00000188417 Aplp2Q06335 707 aa12.15□□□□□ -0.46
Gm28718-201ENSMUST00000188417 Bcl11aQ9QYE3 773 aa12.1□□□□□ -0.47
Gm28718-201ENSMUST00000188417 Cngb1E1AZ71 1325 aa12.08□□□□□ -0.48
Gm28718-201ENSMUST00000188417 Csrnp3P59055 597 aa12.08□□□□□ -0.48
Gm28718-201ENSMUST00000188417 Abcc8B2RUS7 1588 aa12.04□□□□□ -0.48
Gm28718-201ENSMUST00000188417 Sox12Q04890 314 aa11.91□□□□□ -0.5
Gm28718-201ENSMUST00000188417 NefmP08553 848 aa11.88□□□□□ -0.51
Gm28718-201ENSMUST00000188417 Sall2Q9QX96 1004 aa11.86□□□□□ -0.51
Gm28718-201ENSMUST00000188417 Zeb1Q64318 1117 aa11.79□□□□□ -0.52
Gm28718-201ENSMUST00000188417 WdpcpQ8C456 722 aa11.77□□□□□ -0.53
Gm28718-201ENSMUST00000188417 Fam71e1A1L3C1 212 aa11.76□□□□□ -0.53
Gm28718-201ENSMUST00000188417 Cdk11bP24788 784 aaKnown RBP11.74□□□□□ -0.53
Gm28718-201ENSMUST00000188417 Amer1Q7TS75 1132 aa11.72□□□□□ -0.53
Gm28718-201ENSMUST00000188417 PrkcshO08795 521 aa11.71□□□□□ -0.54
Gm28718-201ENSMUST00000188417 Cdca7Q9D0M2 382 aa11.67□□□□□ -0.54
Gm28718-201ENSMUST00000188417 Nop58Q6DFW4 536 aaKnown RBP11.65□□□□□ -0.54
Gm28718-201ENSMUST00000188417 C1qtnf12Q8R2Z0 308 aa11.64□□□□□ -0.55
Gm28718-201ENSMUST00000188417 Nlrp6Q91WS2 869 aa11.62□□□□□ -0.55
Gm28718-201ENSMUST00000188417 Cep164Q5DU05 1446 aa11.58□□□□□ -0.56
Gm28718-201ENSMUST00000188417 Rtl5Q5DTT4 599 aa11.55□□□□□ -0.56
Gm28718-201ENSMUST00000188417 ClspnQ80YR7 1315 aa11.55□□□□□ -0.56
Gm28718-201ENSMUST00000188417 Mier1Q5UAK0 511 aa11.52□□□□□ -0.56
Gm28718-201ENSMUST00000188417 Gm38655A0A286YDK6 273 aa11.51□□□□□ -0.57
Gm28718-201ENSMUST00000188417 CatipB9EKE5 520 aa11.5□□□□□ -0.57
Gm28718-201ENSMUST00000188417 Ms4a5Q810P8 197 aa11.48□□□□□ -0.57
Gm28718-201ENSMUST00000188417 Tnnt3Q9QZ47 272 aa11.47□□□□□ -0.57
Gm28718-201ENSMUST00000188417 Ifnlr1Q8CGK5 535 aa11.46□□□□□ -0.57
Gm28718-201ENSMUST00000188417 Pde4cQ3UEI1 686 aa11.44□□□□□ -0.58
Gm28718-201ENSMUST00000188417 Wdr66E9Q743 1299 aa11.42□□□□□ -0.58
Gm28718-201ENSMUST00000188417 Aebp2Q9Z248 504 aaKnown RBP11.42□□□□□ -0.58
Gm28718-201ENSMUST00000188417 Zbtb7aO88939 569 aaKnown RBP11.41□□□□□ -0.58
Gm28718-201ENSMUST00000188417 AcrbpQ3V140 540 aa11.4□□□□□ -0.58
Gm28718-201ENSMUST00000188417 G430095P16RikE9Q913 147 aa11.4□□□□□ -0.59
Gm28718-201ENSMUST00000188417 Riok3Q9DBU3 519 aaKnown RBP11.39□□□□□ -0.59
Gm28718-201ENSMUST00000188417 ScribQ80U72 1612 aa11.37□□□□□ -0.59
Gm28718-201ENSMUST00000188417 Anp32aO35381 247 aa11.36□□□□□ -0.59
Gm28718-201ENSMUST00000188417 Egfem1Q8C088 590 aa11.35□□□□□ -0.59
Gm28718-201ENSMUST00000188417 Pelp1Q9DBD5 1123 aaKnown RBP11.35□□□□□ -0.59
Gm28718-201ENSMUST00000188417 Znf704Q9ERQ3 566 aa11.33□□□□□ -0.6
Gm28718-201ENSMUST00000188417 Hdac5Q9Z2V6 1113 aa11.31□□□□□ -0.6
Gm28718-201ENSMUST00000188417 Fgd1P52734 960 aa11.29□□□□□ -0.6
Gm28718-201ENSMUST00000188417 Hnrnpul2Q00PI9 745 aaKnown RBP11.29□□□□□ -0.6
Gm28718-201ENSMUST00000188417 SafbD3YXK2 937 aaKnown RBP11.28□□□□□ -0.6
Gm28718-201ENSMUST00000188417 Ccdc136Q3TVA9 1136 aa11.27□□□□□ -0.61
Gm28718-201ENSMUST00000188417 NrdcQ8BHG1 1161 aa11.27□□□□□ -0.61
Gm28718-201ENSMUST00000188417 Slc4a5E9Q3M5 1116 aa11.26□□□□□ -0.61
Gm28718-201ENSMUST00000188417 Grwd1Q810D6 446 aaKnown RBP11.26□□□□□ -0.61
Gm28718-201ENSMUST00000188417 Abcb7Q61102 752 aaKnown RBP11.22□□□□□ -0.61
Gm28718-201ENSMUST00000188417 MyclP10166 368 aa11.21□□□□□ -0.62
Gm28718-201ENSMUST00000188417 Npm2Q80W85 207 aa11.2□□□□□ -0.62
Gm28718-201ENSMUST00000188417 Ccdc9Q8VC31 543 aaKnown RBP11.2□□□□□ -0.62
Gm28718-201ENSMUST00000188417 Pknox2Q8BG99 474 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 213.7 ms