RNA–Protein interactions for RNA: ENSMUST00000188338.6

Msh4-203, Transcript of MutS protein homolog 4, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Msh4, Length 2,802 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4-203ENSMUST00000188338 NischQ80TM9 1593 aa17.97■□□□□ 0.47
Msh4-203ENSMUST00000188338 Gm35339A0A140LHH9 1649 aa17.58■□□□□ 0.4
Msh4-203ENSMUST00000188338 Abcc9P70170 1546 aa17.35■□□□□ 0.37
Msh4-203ENSMUST00000188338 Rhox8Q6VSS7 320 aa17.29■□□□□ 0.36
Msh4-203ENSMUST00000188338 Abcc8B2RUS7 1588 aa16.95■□□□□ 0.3
Msh4-203ENSMUST00000188338 Rtl1Q7M732 1744 aa16.45■□□□□ 0.22
Msh4-203ENSMUST00000188338 Ccdc180J3QNE4 1664 aa16.33■□□□□ 0.2
Msh4-203ENSMUST00000188338 Ehmt2Q9Z148 1263 aaKnown RBP16.16■□□□□ 0.18
Msh4-203ENSMUST00000188338 Zcchc6Q5BLK4 1491 aaKnown RBP16.07■□□□□ 0.16
Msh4-203ENSMUST00000188338 Ccdc136Q3TVA9 1136 aa16.06■□□□□ 0.16
Msh4-203ENSMUST00000188338 ScribQ80U72 1612 aa15.79■□□□□ 0.12
Msh4-203ENSMUST00000188338 Rb1cc1Q9ESK9 1588 aa15.78■□□□□ 0.12
Msh4-203ENSMUST00000188338 Rpgrip1Q9EPQ2 1331 aa15.76■□□□□ 0.11
Msh4-203ENSMUST00000188338 Acin1Q9JIX8 1338 aaKnown RBP15.71■□□□□ 0.11
Msh4-203ENSMUST00000188338 Dcaf1Q80TR8 1506 aa15.64■□□□□ 0.09
Msh4-203ENSMUST00000188338 HrcG5E8J6 738 aa15.61■□□□□ 0.09
Msh4-203ENSMUST00000188338 Trim41Q5NCC3 630 aa15.6■□□□□ 0.09
Msh4-203ENSMUST00000188338 Kdm5dQ62240 1548 aa15.55■□□□□ 0.08
Msh4-203ENSMUST00000188338 Baz1aO88379 1555 aa15.5■□□□□ 0.07
Msh4-203ENSMUST00000188338 NacadQ5SWP3 1504 aa15.33■□□□□ 0.04
Msh4-203ENSMUST00000188338 Gab3Q8BSM5 595 aa15.31■□□□□ 0.04
Msh4-203ENSMUST00000188338 Cngb1E1AZ71 1325 aa15.3■□□□□ 0.04
Msh4-203ENSMUST00000188338 Pcgf6Q99NA9 353 aa15.29■□□□□ 0.04
Msh4-203ENSMUST00000188338 DiexfQ8BTT6 772 aaKnown RBP15.25■□□□□ 0.03
Msh4-203ENSMUST00000188338 Chic1Q8CBW7 227 aa15.2■□□□□ 0.02
Msh4-203ENSMUST00000188338 Smarca2Q6DIC0 1577 aa15.16■□□□□ 0.02
Msh4-203ENSMUST00000188338 Cep164Q5DU05 1446 aa15.16■□□□□ 0.02
Msh4-203ENSMUST00000188338 Supt5hO55201 1082 aaKnown RBP15.11■□□□□ 0.01
Msh4-203ENSMUST00000188338 Rsf1E9PWW9 1441 aaKnown RBP15.07■□□□□ 0
Msh4-203ENSMUST00000188338 Zeb1Q64318 1117 aa15.02■□□□□ -0
Msh4-203ENSMUST00000188338 Sycp2Q9CUU3 1500 aa15.01□□□□□ -0.01
Msh4-203ENSMUST00000188338 Cecr2E9Q2Z1 1453 aa14.98□□□□□ -0.01
Msh4-203ENSMUST00000188338 Ccdc88bQ4QRL3 1481 aa14.97□□□□□ -0.01
Msh4-203ENSMUST00000188338 Esf1Q3V1V3 845 aaKnown RBP14.94□□□□□ -0.02
Msh4-203ENSMUST00000188338 Crybg2B7ZCC2 1516 aa14.93□□□□□ -0.02
Msh4-203ENSMUST00000188338 Brd4Q9ESU6 1400 aaKnown RBP14.86□□□□□ -0.03
Msh4-203ENSMUST00000188338 Mier1Q5UAK0 511 aa14.86□□□□□ -0.03
Msh4-203ENSMUST00000188338 Baz1bQ9Z277 1479 aa14.84□□□□□ -0.03
Msh4-203ENSMUST00000188338 Synj1Q8CHC4 1574 aa14.82□□□□□ -0.04
Msh4-203ENSMUST00000188338 Golga3P55937 1487 aa14.8□□□□□ -0.04
Msh4-203ENSMUST00000188338 BicraF8VPZ9 1578 aa14.78□□□□□ -0.04
Msh4-203ENSMUST00000188338 UbtfP25976 765 aaKnown RBP14.74□□□□□ -0.05
Msh4-203ENSMUST00000188338 Plppr3Q7TPB0 716 aa14.74□□□□□ -0.05
Msh4-203ENSMUST00000188338 Neurod1Q60867 357 aa14.73□□□□□ -0.05
Msh4-203ENSMUST00000188338 Thoc2B1AZI6 1594 aaKnown RBP14.72□□□□□ -0.05
Msh4-203ENSMUST00000188338 Myt1lP97500 1187 aa14.69□□□□□ -0.06
Msh4-203ENSMUST00000188338 Ttbk1Q6PCN3 1308 aa14.67□□□□□ -0.06
Msh4-203ENSMUST00000188338 Sall2Q9QX96 1004 aa14.66□□□□□ -0.06
Msh4-203ENSMUST00000188338 CftrP26361 1476 aa14.65□□□□□ -0.06
Msh4-203ENSMUST00000188338 Ppargc1bQ8VHJ7 1014 aa14.65□□□□□ -0.06
Msh4-203ENSMUST00000188338 NefmP08553 848 aa14.63□□□□□ -0.07
Msh4-203ENSMUST00000188338 Amer1Q7TS75 1132 aa14.62□□□□□ -0.07
Msh4-203ENSMUST00000188338 Ube2uB1AUC4 352 aa14.58□□□□□ -0.08
Msh4-203ENSMUST00000188338 Cc2d2aQ8CFW7 1633 aa14.57□□□□□ -0.08
Msh4-203ENSMUST00000188338 Wdr66E9Q743 1299 aa14.57□□□□□ -0.08
Msh4-203ENSMUST00000188338 Pds5bQ4VA53 1446 aaKnown RBP14.53□□□□□ -0.08
Msh4-203ENSMUST00000188338 Top2bQ64511 1612 aa14.51□□□□□ -0.09
Msh4-203ENSMUST00000188338 Aebp2Q9Z248 504 aaKnown RBP14.51□□□□□ -0.09
Msh4-203ENSMUST00000188338 Npm2Q80W85 207 aa14.5□□□□□ -0.09
Msh4-203ENSMUST00000188338 Cttnbp2B9EJA2 1648 aa14.46□□□□□ -0.09
Msh4-203ENSMUST00000188338 Mapk8ip2Q9ERE9 830 aa14.46□□□□□ -0.1
Msh4-203ENSMUST00000188338 Plekhg3Q4VAC9 1341 aa14.45□□□□□ -0.1
Msh4-203ENSMUST00000188338 Bcl11aQ9QYE3 773 aa14.41□□□□□ -0.1
Msh4-203ENSMUST00000188338 Las1lA2BE28 776 aaKnown RBP14.4□□□□□ -0.1
Msh4-203ENSMUST00000188338 Rapgef2Q8CHG7 1496 aa14.39□□□□□ -0.11
Msh4-203ENSMUST00000188338 Smarca4Q3TKT4 1613 aaKnown RBP14.37□□□□□ -0.11
Msh4-203ENSMUST00000188338 Cep162Q6ZQ06 1403 aa14.35□□□□□ -0.11
Msh4-203ENSMUST00000188338 Ap3b1Q9Z1T1 1105 aa14.34□□□□□ -0.11
Msh4-203ENSMUST00000188338 Fam135aQ6NS59 1506 aa14.34□□□□□ -0.11
Msh4-203ENSMUST00000188338 Il27Q8K3I6 234 aa14.32□□□□□ -0.12
Msh4-203ENSMUST00000188338 Fmn1Q05860 1466 aa14.32□□□□□ -0.12
Msh4-203ENSMUST00000188338 Top2aQ01320 1528 aaKnown RBP14.3□□□□□ -0.12
Msh4-203ENSMUST00000188338 Atad2bE9Q166 1460 aaKnown RBP14.29□□□□□ -0.12
Msh4-203ENSMUST00000188338 Csrnp3P59055 597 aa14.28□□□□□ -0.12
Msh4-203ENSMUST00000188338 Clip1Q922J3 1391 aa14.28□□□□□ -0.12
Msh4-203ENSMUST00000188338 Myt1Q8CFC2 1127 aa14.27□□□□□ -0.13
Msh4-203ENSMUST00000188338 CatipB9EKE5 520 aa14.26□□□□□ -0.13
Msh4-203ENSMUST00000188338 PrkcshO08795 521 aa14.26□□□□□ -0.13
Msh4-203ENSMUST00000188338 Eid3Q3V124 375 aa14.23□□□□□ -0.13
Msh4-203ENSMUST00000188338 TonslQ6NZL6 1363 aa14.23□□□□□ -0.13
Msh4-203ENSMUST00000188338 Iqgap2Q3UQ44 1575 aa14.22□□□□□ -0.13
Msh4-203ENSMUST00000188338 CenpbP27790 599 aa14.21□□□□□ -0.13
Msh4-203ENSMUST00000188338 Nop58Q6DFW4 536 aaKnown RBP14.2□□□□□ -0.14
Msh4-203ENSMUST00000188338 ClspnQ80YR7 1315 aa14.2□□□□□ -0.14
Msh4-203ENSMUST00000188338 Gm38655A0A286YDK6 273 aa14.18□□□□□ -0.14
Msh4-203ENSMUST00000188338 Cdk11bP24788 784 aaKnown RBP14.18□□□□□ -0.14
Msh4-203ENSMUST00000188338 Anks4bQ8K3X6 423 aa14.16□□□□□ -0.14
Msh4-203ENSMUST00000188338 1700123L14RikQ3V2K7 440 aa14.16□□□□□ -0.14
Msh4-203ENSMUST00000188338 Dnajc5bQ9CQ94 199 aa14.14□□□□□ -0.15
Msh4-203ENSMUST00000188338 PtprkP35822 1457 aa14.11□□□□□ -0.15
Msh4-203ENSMUST00000188338 Ercc6F8VPZ5 1481 aa14.08□□□□□ -0.16
Msh4-203ENSMUST00000188338 Arhgap35Q91YM2 1499 aa14.04□□□□□ -0.16
Msh4-203ENSMUST00000188338 Ncapd3Q6ZQK0 1506 aa14.04□□□□□ -0.16
Msh4-203ENSMUST00000188338 Eif4g1Q6NZJ6 1600 aaKnown RBP14.02□□□□□ -0.16
Msh4-203ENSMUST00000188338 Arap1Q4LDD4 1452 aa14.02□□□□□ -0.16
Msh4-203ENSMUST00000188338 Lmod2Q3UHZ5 550 aa14□□□□□ -0.17
Msh4-203ENSMUST00000188338 Kif15Q6P9L6 1387 aa14□□□□□ -0.17
Msh4-203ENSMUST00000188338 Setd5Q5XJV7 1441 aa14□□□□□ -0.17
Msh4-203ENSMUST00000188338 Fam50aQ9WV03 339 aaKnown RBP13.98□□□□□ -0.17
Msh4-203ENSMUST00000188338 Eea1Q8BL66 1411 aa13.97□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms