RNA–Protein interactions for RNA: ENSMUST00000180779.1

5430416N02Rik-201, mousemouse

TSL 1 (best) BASIC

Gene 5430416N02Rik, Length 3,486 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
5430416N02Rik-201ENSMUST00000180779 Rhox8Q6VSS7 320 aa17.81■□□□□ 0.44
5430416N02Rik-201ENSMUST00000180779 NischQ80TM9 1593 aa17.48■□□□□ 0.39
5430416N02Rik-201ENSMUST00000180779 Gm35339A0A140LHH9 1649 aa17.28■□□□□ 0.36
5430416N02Rik-201ENSMUST00000180779 Abcc9P70170 1546 aa16.99■□□□□ 0.31
5430416N02Rik-201ENSMUST00000180779 Abcc8B2RUS7 1588 aa16.67■□□□□ 0.26
5430416N02Rik-201ENSMUST00000180779 Ehmt2Q9Z148 1263 aaKnown RBP16.65■□□□□ 0.26
5430416N02Rik-201ENSMUST00000180779 Ccdc136Q3TVA9 1136 aa16.42■□□□□ 0.22
5430416N02Rik-201ENSMUST00000180779 Ccdc180J3QNE4 1664 aa15.86■□□□□ 0.13
5430416N02Rik-201ENSMUST00000180779 Rpgrip1Q9EPQ2 1331 aa15.85■□□□□ 0.13
5430416N02Rik-201ENSMUST00000180779 Trim41Q5NCC3 630 aa15.83■□□□□ 0.12
5430416N02Rik-201ENSMUST00000180779 Gab3Q8BSM5 595 aa15.77■□□□□ 0.12
5430416N02Rik-201ENSMUST00000180779 Rtl1Q7M732 1744 aa15.76■□□□□ 0.11
5430416N02Rik-201ENSMUST00000180779 Cngb1E1AZ71 1325 aa15.71■□□□□ 0.11
5430416N02Rik-201ENSMUST00000180779 Acin1Q9JIX8 1338 aaKnown RBP15.7■□□□□ 0.1
5430416N02Rik-201ENSMUST00000180779 ScribQ80U72 1612 aa15.64■□□□□ 0.09
5430416N02Rik-201ENSMUST00000180779 HrcG5E8J6 738 aa15.51■□□□□ 0.07
5430416N02Rik-201ENSMUST00000180779 Dcaf1Q80TR8 1506 aa15.48■□□□□ 0.07
5430416N02Rik-201ENSMUST00000180779 Zeb1Q64318 1117 aa15.48■□□□□ 0.07
5430416N02Rik-201ENSMUST00000180779 Zcchc6Q5BLK4 1491 aaKnown RBP15.46■□□□□ 0.07
5430416N02Rik-201ENSMUST00000180779 Esf1Q3V1V3 845 aaKnown RBP15.43■□□□□ 0.06
5430416N02Rik-201ENSMUST00000180779 Pcgf6Q99NA9 353 aa15.37■□□□□ 0.05
5430416N02Rik-201ENSMUST00000180779 Rb1cc1Q9ESK9 1588 aa15.31■□□□□ 0.04
5430416N02Rik-201ENSMUST00000180779 Kdm5dQ62240 1548 aa15.29■□□□□ 0.04
5430416N02Rik-201ENSMUST00000180779 Supt5hO55201 1082 aaKnown RBP15.23■□□□□ 0.03
5430416N02Rik-201ENSMUST00000180779 Myt1lP97500 1187 aa15.19■□□□□ 0.02
5430416N02Rik-201ENSMUST00000180779 Chic1Q8CBW7 227 aa15.19■□□□□ 0.02
5430416N02Rik-201ENSMUST00000180779 NacadQ5SWP3 1504 aa15.15■□□□□ 0.02
5430416N02Rik-201ENSMUST00000180779 UbtfP25976 765 aaKnown RBP15.13■□□□□ 0.01
5430416N02Rik-201ENSMUST00000180779 Baz1aO88379 1555 aa15.12■□□□□ 0.01
5430416N02Rik-201ENSMUST00000180779 Wdr66E9Q743 1299 aa15.11■□□□□ 0.01
5430416N02Rik-201ENSMUST00000180779 Ppargc1bQ8VHJ7 1014 aa15.1■□□□□ 0.01
5430416N02Rik-201ENSMUST00000180779 Npm2Q80W85 207 aa14.99□□□□□ -0.01
5430416N02Rik-201ENSMUST00000180779 Las1lA2BE28 776 aaKnown RBP14.98□□□□□ -0.01
5430416N02Rik-201ENSMUST00000180779 Mier1Q5UAK0 511 aa14.97□□□□□ -0.01
5430416N02Rik-201ENSMUST00000180779 Cep164Q5DU05 1446 aa14.88□□□□□ -0.03
5430416N02Rik-201ENSMUST00000180779 Neurod1Q60867 357 aa14.87□□□□□ -0.03
5430416N02Rik-201ENSMUST00000180779 Crybg2B7ZCC2 1516 aa14.85□□□□□ -0.03
5430416N02Rik-201ENSMUST00000180779 Sycp2Q9CUU3 1500 aa14.85□□□□□ -0.03
5430416N02Rik-201ENSMUST00000180779 NefmP08553 848 aa14.81□□□□□ -0.04
5430416N02Rik-201ENSMUST00000180779 Il27Q8K3I6 234 aa14.8□□□□□ -0.04
5430416N02Rik-201ENSMUST00000180779 Rsf1E9PWW9 1441 aaKnown RBP14.8□□□□□ -0.04
5430416N02Rik-201ENSMUST00000180779 Smarca2Q6DIC0 1577 aa14.79□□□□□ -0.04
5430416N02Rik-201ENSMUST00000180779 Ap3b1Q9Z1T1 1105 aa14.75□□□□□ -0.05
5430416N02Rik-201ENSMUST00000180779 Sall2Q9QX96 1004 aa14.74□□□□□ -0.05
5430416N02Rik-201ENSMUST00000180779 CenpbP27790 599 aa14.73□□□□□ -0.05
5430416N02Rik-201ENSMUST00000180779 DiexfQ8BTT6 772 aaKnown RBP14.72□□□□□ -0.05
5430416N02Rik-201ENSMUST00000180779 Plekhg3Q4VAC9 1341 aa14.69□□□□□ -0.06
5430416N02Rik-201ENSMUST00000180779 Ccdc88bQ4QRL3 1481 aa14.68□□□□□ -0.06
5430416N02Rik-201ENSMUST00000180779 Brd4Q9ESU6 1400 aaKnown RBP14.66□□□□□ -0.06
5430416N02Rik-201ENSMUST00000180779 Gm38655A0A286YDK6 273 aa14.6□□□□□ -0.07
5430416N02Rik-201ENSMUST00000180779 Cecr2E9Q2Z1 1453 aa14.6□□□□□ -0.07
5430416N02Rik-201ENSMUST00000180779 BicraF8VPZ9 1578 aa14.58□□□□□ -0.08
5430416N02Rik-201ENSMUST00000180779 1700123L14RikQ3V2K7 440 aa14.57□□□□□ -0.08
5430416N02Rik-201ENSMUST00000180779 Aebp2Q9Z248 504 aaKnown RBP14.54□□□□□ -0.08
5430416N02Rik-201ENSMUST00000180779 Eid3Q3V124 375 aa14.53□□□□□ -0.08
5430416N02Rik-201ENSMUST00000180779 Csrnp3P59055 597 aa14.53□□□□□ -0.08
5430416N02Rik-201ENSMUST00000180779 Golga3P55937 1487 aa14.52□□□□□ -0.09
5430416N02Rik-201ENSMUST00000180779 Ube2uB1AUC4 352 aa14.5□□□□□ -0.09
5430416N02Rik-201ENSMUST00000180779 Mapk8ip2Q9ERE9 830 aa14.5□□□□□ -0.09
5430416N02Rik-201ENSMUST00000180779 Nop58Q6DFW4 536 aaKnown RBP14.47□□□□□ -0.09
5430416N02Rik-201ENSMUST00000180779 Cdk11bP24788 784 aaKnown RBP14.46□□□□□ -0.09
5430416N02Rik-201ENSMUST00000180779 TonslQ6NZL6 1363 aa14.43□□□□□ -0.1
5430416N02Rik-201ENSMUST00000180779 Myt1Q8CFC2 1127 aa14.43□□□□□ -0.1
5430416N02Rik-201ENSMUST00000180779 Fam50aQ9WV03 339 aaKnown RBP14.42□□□□□ -0.1
5430416N02Rik-201ENSMUST00000180779 Lmod2Q3UHZ5 550 aa14.39□□□□□ -0.11
5430416N02Rik-201ENSMUST00000180779 Clip1Q922J3 1391 aa14.35□□□□□ -0.11
5430416N02Rik-201ENSMUST00000180779 Synj1Q8CHC4 1574 aa14.35□□□□□ -0.11
5430416N02Rik-201ENSMUST00000180779 Slc24a1Q91WD8 1130 aa14.34□□□□□ -0.11
5430416N02Rik-201ENSMUST00000180779 Bcl11aQ9QYE3 773 aa14.3□□□□□ -0.12
5430416N02Rik-201ENSMUST00000180779 ClspnQ80YR7 1315 aa14.29□□□□□ -0.12
5430416N02Rik-201ENSMUST00000180779 CftrP26361 1476 aa14.26□□□□□ -0.13
5430416N02Rik-201ENSMUST00000180779 NclP09405 707 aaKnown RBP14.23□□□□□ -0.13
5430416N02Rik-201ENSMUST00000180779 Anks4bQ8K3X6 423 aa14.18□□□□□ -0.14
5430416N02Rik-201ENSMUST00000180779 Smarca4Q3TKT4 1613 aaKnown RBP14.16□□□□□ -0.14
5430416N02Rik-201ENSMUST00000180779 Amer1Q7TS75 1132 aa14.14□□□□□ -0.15
5430416N02Rik-201ENSMUST00000180779 Cttnbp2B9EJA2 1648 aa14.14□□□□□ -0.15
5430416N02Rik-201ENSMUST00000180779 Rapgef2Q8CHG7 1496 aa14.13□□□□□ -0.15
5430416N02Rik-201ENSMUST00000180779 Cep162Q6ZQ06 1403 aa14.13□□□□□ -0.15
5430416N02Rik-201ENSMUST00000180779 Top2bQ64511 1612 aa14.08□□□□□ -0.15
5430416N02Rik-201ENSMUST00000180779 PrkcshO08795 521 aa14.07□□□□□ -0.16
5430416N02Rik-201ENSMUST00000180779 Npm1Q61937 292 aaKnown RBP14.05□□□□□ -0.16
5430416N02Rik-201ENSMUST00000180779 Setd5Q5XJV7 1441 aa14.04□□□□□ -0.16
5430416N02Rik-201ENSMUST00000180779 Cc2d2aQ8CFW7 1633 aa14.04□□□□□ -0.16
5430416N02Rik-201ENSMUST00000180779 Aplp2Q06335 707 aa14.03□□□□□ -0.16
5430416N02Rik-201ENSMUST00000180779 BlmO88700 1416 aa14.02□□□□□ -0.16
5430416N02Rik-201ENSMUST00000180779 Kif15Q6P9L6 1387 aa14.01□□□□□ -0.17
5430416N02Rik-201ENSMUST00000180779 Chic2Q9D9G3 165 aa14□□□□□ -0.17
5430416N02Rik-201ENSMUST00000180779 Fmn1Q05860 1466 aa14□□□□□ -0.17
5430416N02Rik-201ENSMUST00000180779 Iqgap2Q3UQ44 1575 aa14□□□□□ -0.17
5430416N02Rik-201ENSMUST00000180779 Eif5bQ05D44 1216 aaKnown RBP13.99□□□□□ -0.17
5430416N02Rik-201ENSMUST00000180779 SafbD3YXK2 937 aaKnown RBP13.95□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Ttbk1Q6PCN3 1308 aa13.94□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Atad2bE9Q166 1460 aaKnown RBP13.94□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Ubl4bQ9CQ84 188 aa13.94□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Zbtb7cQ8VCZ7 619 aa13.91□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Eea1Q8BL66 1411 aa13.91□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Hnrnpul2Q00PI9 745 aaKnown RBP13.9□□□□□ -0.18
5430416N02Rik-201ENSMUST00000180779 Fam71e1A1L3C1 212 aa13.89□□□□□ -0.19
5430416N02Rik-201ENSMUST00000180779 Ifnlr1Q8CGK5 535 aa13.88□□□□□ -0.19
5430416N02Rik-201ENSMUST00000180779 Pds5bQ4VA53 1446 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms