RNA–Protein interactions for RNA: ENSMUST00000159541.7

Shprh-203, Transcript of E3 ubiquitin-protein ligase SHPRH, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shprh, Length 6,679 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shprh-203ENSMUST00000159541 Rpgrip1Q9EPQ2 1331 aa13.35□□□□□ -0.27
Shprh-203ENSMUST00000159541 Rhox8Q6VSS7 320 aa13.29□□□□□ -0.28
Shprh-203ENSMUST00000159541 Las1lA2BE28 776 aaKnown RBP13.27□□□□□ -0.29
Shprh-203ENSMUST00000159541 Cngb1E1AZ71 1325 aa12.98□□□□□ -0.33
Shprh-203ENSMUST00000159541 Amer1Q7TS75 1132 aa12.9□□□□□ -0.34
Shprh-203ENSMUST00000159541 Myt1Q8CFC2 1127 aa12.74□□□□□ -0.37
Shprh-203ENSMUST00000159541 Pelp1Q9DBD5 1123 aaKnown RBP12.68□□□□□ -0.38
Shprh-203ENSMUST00000159541 NischQ80TM9 1593 aa12.64□□□□□ -0.39
Shprh-203ENSMUST00000159541 DiexfQ8BTT6 772 aaKnown RBP12.57□□□□□ -0.4
Shprh-203ENSMUST00000159541 CenpbP27790 599 aa12.56□□□□□ -0.4
Shprh-203ENSMUST00000159541 Abcc9P70170 1546 aa12.53□□□□□ -0.4
Shprh-203ENSMUST00000159541 Gm35339A0A140LHH9 1649 aa12.25□□□□□ -0.45
Shprh-203ENSMUST00000159541 Esf1Q3V1V3 845 aaKnown RBP12.22□□□□□ -0.45
Shprh-203ENSMUST00000159541 Ehmt2Q9Z148 1263 aaKnown RBP12.16□□□□□ -0.46
Shprh-203ENSMUST00000159541 Wdr66E9Q743 1299 aa12.02□□□□□ -0.49
Shprh-203ENSMUST00000159541 Acin1Q9JIX8 1338 aaKnown RBP11.99□□□□□ -0.49
Shprh-203ENSMUST00000159541 4930567H17RikQ3V0K5 233 aa11.98□□□□□ -0.49
Shprh-203ENSMUST00000159541 Ttbk1Q6PCN3 1308 aa11.97□□□□□ -0.49
Shprh-203ENSMUST00000159541 Ccdc136Q3TVA9 1136 aa11.96□□□□□ -0.49
Shprh-203ENSMUST00000159541 Zeb1Q64318 1117 aa11.96□□□□□ -0.49
Shprh-203ENSMUST00000159541 Pcgf6Q99NA9 353 aa11.95□□□□□ -0.5
Shprh-203ENSMUST00000159541 Rtl5Q5DTT4 599 aa11.77□□□□□ -0.53
Shprh-203ENSMUST00000159541 4933416C03RikQ3V063 378 aa11.76□□□□□ -0.53
Shprh-203ENSMUST00000159541 Abcc8B2RUS7 1588 aa11.73□□□□□ -0.53
Shprh-203ENSMUST00000159541 Trim41Q5NCC3 630 aa11.71□□□□□ -0.53
Shprh-203ENSMUST00000159541 Il27Q8K3I6 234 aa11.67□□□□□ -0.54
Shprh-203ENSMUST00000159541 Zcchc6Q5BLK4 1491 aaKnown RBP11.65□□□□□ -0.54
Shprh-203ENSMUST00000159541 Npm2Q80W85 207 aa11.62□□□□□ -0.55
Shprh-203ENSMUST00000159541 Cdk11bP24788 784 aaKnown RBP11.61□□□□□ -0.55
Shprh-203ENSMUST00000159541 Bcl11aQ9QYE3 773 aa11.6□□□□□ -0.55
Shprh-203ENSMUST00000159541 Ythdc1E9Q5K9 736 aaKnown RBP11.56□□□□□ -0.56
Shprh-203ENSMUST00000159541 Tnnt3Q9QZ47 272 aa11.52□□□□□ -0.57
Shprh-203ENSMUST00000159541 Stra8P70278 393 aa11.5□□□□□ -0.57
Shprh-203ENSMUST00000159541 Supt5hO55201 1082 aaKnown RBP11.47□□□□□ -0.57
Shprh-203ENSMUST00000159541 NefmP08553 848 aa11.45□□□□□ -0.58
Shprh-203ENSMUST00000159541 Npm1Q61937 292 aaKnown RBP11.44□□□□□ -0.58
Shprh-203ENSMUST00000159541 Neurod1Q60867 357 aa11.42□□□□□ -0.58
Shprh-203ENSMUST00000159541 Ubl4bQ9CQ84 188 aa11.42□□□□□ -0.58
Shprh-203ENSMUST00000159541 Nop58Q6DFW4 536 aaKnown RBP11.39□□□□□ -0.59
Shprh-203ENSMUST00000159541 NacadQ5SWP3 1504 aa11.38□□□□□ -0.59
Shprh-203ENSMUST00000159541 Aplp2Q06335 707 aa11.37□□□□□ -0.59
Shprh-203ENSMUST00000159541 Gab3Q8BSM5 595 aa11.37□□□□□ -0.59
Shprh-203ENSMUST00000159541 Myt1lP97500 1187 aa11.37□□□□□ -0.59
Shprh-203ENSMUST00000159541 Csrnp3P59055 597 aa11.34□□□□□ -0.59
Shprh-203ENSMUST00000159541 Anp32aO35381 247 aa11.31□□□□□ -0.6
Shprh-203ENSMUST00000159541 Ube2uB1AUC4 352 aa11.28□□□□□ -0.6
Shprh-203ENSMUST00000159541 Ifnlr1Q8CGK5 535 aa11.26□□□□□ -0.61
Shprh-203ENSMUST00000159541 Anks4bQ8K3X6 423 aa11.25□□□□□ -0.61
Shprh-203ENSMUST00000159541 Ercc6F8VPZ5 1481 aa11.24□□□□□ -0.61
Shprh-203ENSMUST00000159541 HrcG5E8J6 738 aa11.24□□□□□ -0.61
Shprh-203ENSMUST00000159541 DaxxO35613 739 aa11.21□□□□□ -0.62
Shprh-203ENSMUST00000159541 Gm38655A0A286YDK6 273 aa11.21□□□□□ -0.62
Shprh-203ENSMUST00000159541 Plppr3Q7TPB0 716 aa11.21□□□□□ -0.62
Shprh-203ENSMUST00000159541 Ccdc9Q8VC31 543 aaKnown RBP11.2□□□□□ -0.62
Shprh-203ENSMUST00000159541 1700123L14RikQ3V2K7 440 aa11.2□□□□□ -0.62
Shprh-203ENSMUST00000159541 Slc24a1Q91WD8 1130 aa11.15□□□□□ -0.62
Shprh-203ENSMUST00000159541 Anp32bQ9EST5 272 aaKnown RBP11.15□□□□□ -0.62
Shprh-203ENSMUST00000159541 Pknox2Q8BG99 474 aa11.11□□□□□ -0.63
Shprh-203ENSMUST00000159541 Rb1cc1Q9ESK9 1588 aa11.11□□□□□ -0.63
Shprh-203ENSMUST00000159541 Kdm5dQ62240 1548 aa11.08□□□□□ -0.64
Shprh-203ENSMUST00000159541 Pds5bQ4VA53 1446 aaKnown RBP11.07□□□□□ -0.64
Shprh-203ENSMUST00000159541 Hsp90aa1P07901 733 aaKnown RBP11.04□□□□□ -0.64
Shprh-203ENSMUST00000159541 PrkcshO08795 521 aa11.01□□□□□ -0.65
Shprh-203ENSMUST00000159541 Fam71e1A1L3C1 212 aa10.99□□□□□ -0.65
Shprh-203ENSMUST00000159541 Fkbp15Q6P9Q6 1216 aaKnown RBP10.98□□□□□ -0.65
Shprh-203ENSMUST00000159541 Eif5bQ05D44 1216 aaKnown RBP10.98□□□□□ -0.65
Shprh-203ENSMUST00000159541 NeflP08551 543 aa10.97□□□□□ -0.65
Shprh-203ENSMUST00000159541 Gm13697A2AK42 830 aa10.95□□□□□ -0.66
Shprh-203ENSMUST00000159541 Ccdc180J3QNE4 1664 aa10.95□□□□□ -0.66
Shprh-203ENSMUST00000159541 Brd4Q9ESU6 1400 aaKnown RBP10.94□□□□□ -0.66
Shprh-203ENSMUST00000159541 Irx3P81067 507 aa10.93□□□□□ -0.66
Shprh-203ENSMUST00000159541 Ap3b1Q9Z1T1 1105 aa10.92□□□□□ -0.66
Shprh-203ENSMUST00000159541 Ppargc1bQ8VHJ7 1014 aa10.9□□□□□ -0.66
Shprh-203ENSMUST00000159541 BccipQ9CWI3 316 aa10.88□□□□□ -0.67
Shprh-203ENSMUST00000159541 Sycp2Q9CUU3 1500 aa10.88□□□□□ -0.67
Shprh-203ENSMUST00000159541 Kif15Q6P9L6 1387 aa10.86□□□□□ -0.67
Shprh-203ENSMUST00000159541 Lmod3E9QA62 571 aa10.86□□□□□ -0.67
Shprh-203ENSMUST00000159541 CatipB9EKE5 520 aa10.86□□□□□ -0.67
Shprh-203ENSMUST00000159541 Znf326O88291 580 aa10.85□□□□□ -0.67
Shprh-203ENSMUST00000159541 Safb2Q80YR5 991 aaKnown RBP10.84□□□□□ -0.67
Shprh-203ENSMUST00000159541 ClspnQ80YR7 1315 aa10.84□□□□□ -0.67
Shprh-203ENSMUST00000159541 Rsf1E9PWW9 1441 aaKnown RBP10.83□□□□□ -0.68
Shprh-203ENSMUST00000159541 NrdcQ8BHG1 1161 aa10.83□□□□□ -0.68
Shprh-203ENSMUST00000159541 Mapk8ip2Q9ERE9 830 aa10.83□□□□□ -0.68
Shprh-203ENSMUST00000159541 Ccdc27Q3V036 639 aa10.82□□□□□ -0.68
Shprh-203ENSMUST00000159541 Tnnt2P50752 301 aa10.81□□□□□ -0.68
Shprh-203ENSMUST00000159541 UbtfP25976 765 aaKnown RBP10.81□□□□□ -0.68
Shprh-203ENSMUST00000159541 Znf316Q6PGE4 1016 aa10.79□□□□□ -0.68
Shprh-203ENSMUST00000159541 Q8BT18 775 aa10.79□□□□□ -0.68
Shprh-203ENSMUST00000159541 Baz1aO88379 1555 aa10.78□□□□□ -0.68
Shprh-203ENSMUST00000159541 Taok2Q6ZQ29 1240 aa10.78□□□□□ -0.68
Shprh-203ENSMUST00000159541 Hdac5Q9Z2V6 1113 aa10.78□□□□□ -0.68
Shprh-203ENSMUST00000159541 Cep164Q5DU05 1446 aa10.78□□□□□ -0.68
Shprh-203ENSMUST00000159541 ScribQ80U72 1612 aa10.77□□□□□ -0.68
Shprh-203ENSMUST00000159541 Ppp1r18Q8BQ30 594 aa10.77□□□□□ -0.69
Shprh-203ENSMUST00000159541 Podxl2Q8CAE9 603 aa10.77□□□□□ -0.69
Shprh-203ENSMUST00000159541 Sall2Q9QX96 1004 aa10.76□□□□□ -0.69
Shprh-203ENSMUST00000159541 Gtf3c3Q3TMP1 882 aa10.75□□□□□ -0.69
Shprh-203ENSMUST00000159541 Phldb1Q6PDH0 1371 aaKnown RBP10.73□□□□□ -0.69
Shprh-203ENSMUST00000159541 Rtl1Q7M732 1744 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms